EuRBPDB

Description

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0026418 (Gene tree)
Gene ID: 39557
Gene Symbol: Hsc70Cb
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Plus strand
Length: 6668
Position: chr3L: 14037019-14043686
Accession
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27378189	Global changes of the RNA bound proteome during the maternal-to-zygotic transition in Drosophila	IC & embryos.MZT	2016 Jul 5	Sysoev VO	DOI: 10.1038/ncomms12128
27197210	The mRNA-bound proteome of the early fly embryo	IC & embryos	2016 Apr 28	Wessels HH	DOI: 10.1101/gr.200386.115

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0304035	-	3159	-	FBpp0292998	804 (aa)	-	Q9VUC1
FBtr0304034	-	3184	-	FBpp0292997	804 (aa)	-	Q9VUC1
FBtr0304037	-	3258	-	FBpp0293000	836 (aa)	-	M9MSL3
FBtr0304036	-	3283	-	FBpp0292999	836 (aa)	-	M9MSL3
FBtr0075773	-	3292	-	FBpp0075515	804 (aa)	-	Q9VUC1
FBtr0075772	-	3162	-	FBpp0075514	804 (aa)	-	Q9VUC1
FBtr0075771	-	3187	-	FBpp0075513	804 (aa)	-	Q9VUC1
FBtr0333051	-	3590	-	FBpp0305265	804 (aa)	-	Q9VUC1

Gene Model

Click here to download FBgn0026418's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0026418's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0026418	Hsc70Cb	93	42.216	WBGene00016250	hsp-110	93	49.200	Caenorhabditis_elegans
FBgn0026418	Hsc70Cb	80	38.235	YPL106C	SSE1	90	37.771	Saccharomyces_cerevisiae

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005634	nucleus	24292889.	HDA	Component
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005737	cytoplasm	24292889.	HDA	Component
GO:0005829	cytosol	25294944.	HDA	Component
GO:0005829	cytosol	21873635.	IBA	Component