EuRBPDB

Description

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0026761 (Gene tree)
Gene ID: 35559
Gene Symbol: Trap1
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Minus strand
Length: 2616
Position: chr2R: 6633647-6636262
Accession
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27197210	The mRNA-bound proteome of the early fly embryo	IC & embryos	2016 Apr 28	Wessels HH	DOI: 10.1101/gr.200386.115

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0336666	-	2303	-	FBpp0307647	691 (aa)	-	A1Z6L9
FBtr0086149	-	2478	-	FBpp0085482	691 (aa)	-	A1Z6L9

Gene Model

Click here to download FBgn0026761's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0026761's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0026761	Trap1	88	33.083	WBGene00000915	daf-21	92	33.083	Caenorhabditis_elegans
FBgn0026761	Trap1	87	45.192	FBgn0001233	Hsp83	91	31.204	Drosophila_melanogaster
FBgn0026761	Trap1	93	52.877	ENSG00000126602	TRAP1	100	62.857	Homo_sapiens
FBgn0026761	Trap1	96	30.831	ENSG00000166598	HSP90B1	77	54.054	Homo_sapiens
FBgn0026761	Trap1	88	46.154	ENSG00000096384	HSP90AB1	83	45.540	Homo_sapiens
FBgn0026761	Trap1	89	45.540	ENSG00000080824	HSP90AA1	78	55.263	Homo_sapiens
FBgn0026761	Trap1	93	53.846	ENSMUSG00000005981	Trap1	90	53.846	Mus_musculus
FBgn0026761	Trap1	88	32.244	ENSMUSG00000020048	Hsp90b1	89	31.686	Mus_musculus
FBgn0026761	Trap1	88	46.154	ENSMUSG00000023944	Hsp90ab1	93	48.148	Mus_musculus
FBgn0026761	Trap1	89	45.540	ENSMUSG00000021270	Hsp90aa1	92	43.523	Mus_musculus
FBgn0026761	Trap1	90	34.348	YMR186W	HSC82	94	34.493	Saccharomyces_cerevisiae
FBgn0026761	Trap1	90	46.226	YPL240C	HSP82	86	46.226	Saccharomyces_cerevisiae

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	-	ISS	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005634	nucleus	-	ISS	Component
GO:0005739	mitochondrion	21873635.	IBA	Component
GO:0005739	mitochondrion	23328674.26631731.	IDA	Component
GO:0005739	mitochondrion	10652318.	ISS	Component
GO:0005743	mitochondrial inner membrane	21873635.	IBA	Component
GO:0005743	mitochondrial inner membrane	-	ISS	Component
GO:0005759	mitochondrial matrix	-	ISS	Component
GO:0006457	protein folding	-	ISS	Process
GO:0006979	response to oxidative stress	23328674.	IMP	Process
GO:0009408	response to heat	25265088.	IMP	Process
GO:0016887	ATPase activity	10652318.	ISS	Function
GO:0019901	protein kinase binding	21873635.	IBA	Function
GO:0019901	protein kinase binding	-	ISS	Function
GO:0034514	mitochondrial unfolded protein response	25265088.	IGI	Process
GO:0034514	mitochondrial unfolded protein response	25265088.	IMP	Process
GO:0034605	cellular response to heat	-	ISS	Process
GO:0051082	unfolded protein binding	-	ISS	Function
GO:0070062	extracellular exosome	-	ISS	Component
GO:1902884	positive regulation of response to oxidative stress	25265088.	IMP	Process