EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0027081 (Gene tree)
Gene ID: 45784
Gene Symbol: ThrRS
Alias: -
Full Name: Threonyl-tRNA synthetase
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: confidence
Strand: Plus strand
Length: 3420 bases
Position: chr2L:12103751-12107170
Accession: FBgn0027081
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0079913	tRNA_SAD	PF07973.14	2.1e-13	1	1
FBpp0079915	tRNA_SAD	PF07973.14	2.1e-13	1	1
FBpp0079914	tRNA_SAD	PF07973.14	2.4e-13	1	1
FBpp0312095	tRNA_SAD	PF07973.14	2.4e-13	1	1
FBpp0079913	HGTP_anticodon	PF03129.20	2e-22	1	1
FBpp0079915	HGTP_anticodon	PF03129.20	2e-22	1	1
FBpp0079914	HGTP_anticodon	PF03129.20	2.2e-22	1	1
FBpp0312095	HGTP_anticodon	PF03129.20	2.2e-22	1	1
FBpp0079913	tRNA-synt_2b	PF00587.25	8.7e-40	1	1
FBpp0079915	tRNA-synt_2b	PF00587.25	8.7e-40	1	1
FBpp0079914	tRNA-synt_2b	PF00587.25	1e-39	1	1
FBpp0312095	tRNA-synt_2b	PF00587.25	1e-39	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27197210	The mRNA-bound proteome of the early fly embryo	IC & embryos	2016 Apr 28	Wessels HH	DOI: 10.1101/gr.200386.115

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0080333	-	2314	-	FBpp0079915	690 (aa)	-	Q8IP94
FBtr0080332	-	2520	-	FBpp0079914	747 (aa)	-	Q9VKB0
FBtr0080331	-	2298	-	FBpp0079913	690 (aa)	-	Q8IP94
FBtr0346436	-	2796	-	FBpp0312095	747 (aa)	-	Q8IGC5

Gene Model

Click here to download FBgn0027081's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0027081's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0027081	ThrRS	97	66.418	WBGene00006617	tars-1	98	66.418	Caenorhabditis_elegans
FBgn0027081	ThrRS	98	67.965	ENSCSAVG00000003985	-	97	71.987	Ciona_savignyi
FBgn0027081	ThrRS	96	55.685	YIL078W	THS1	93	55.685	Saccharomyces_cerevisiae

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0004829	threonine-tRNA ligase activity	21873635.	IBA	Function
GO:0004829	threonine-tRNA ligase activity	26761199.	TAS	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0005737	cytoplasm	26761199.	TAS	Component
GO:0005739	mitochondrion	26761199.	TAS	Component
GO:0006435	threonyl-tRNA aminoacylation	21873635.	IBA	Process
GO:0006435	threonyl-tRNA aminoacylation	26761199.	TAS	Process