EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0027088 (Gene tree)
Gene ID: 39644
Gene Symbol: GlyRS
Alias: -
Full Name: Glycyl-tRNA synthetase
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: confidence
Strand: Plus strand
Length: 2545 bases
Position: chr3L:15095142-15097686
Accession: FBgn0027088
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0075385	HGTP_anticodon	PF03129.20	1.3e-25	1	1
FBpp0075386	HGTP_anticodon	PF03129.20	1.6e-25	1	1
FBpp0306062	HGTP_anticodon	PF03129.20	1.6e-25	1	1
FBpp0075385	tRNA-synt_2b	PF00587.25	2.6e-09	1	1
FBpp0075386	tRNA-synt_2b	PF00587.25	3.2e-09	1	1
FBpp0306062	tRNA-synt_2b	PF00587.25	3.2e-09	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27197210	The mRNA-bound proteome of the early fly embryo	IC & embryos	2016 Apr 28	Wessels HH	DOI: 10.1101/gr.200386.115

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0075632	-	2457	-	FBpp0075385	679 (aa)	-	Q961R8
FBtr0075633	-	2545	-	FBpp0075386	765 (aa)	-	Q9VUK8
FBtr0333934	-	2476	-	FBpp0306062	765 (aa)	-	C9QP25

Gene Model

Click here to download FBgn0027088's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0027088's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0027088	GlyRS	100	60.441	ENSG00000106105	GARS	93	59.913	Homo_sapiens
FBgn0027088	GlyRS	99	61.333	ENSAPOG00000019999	gars	93	60.115	Acanthochromis_polyacanthus
FBgn0027088	GlyRS	99	56.825	ENSAPOG00000020089	gars	99	56.825	Acanthochromis_polyacanthus
FBgn0027088	GlyRS	100	60.588	ENSAMEG00000006652	GARS	93	60.116	Ailuropoda_melanoleuca
FBgn0027088	GlyRS	99	60.741	ENSACIG00000020744	gars	93	59.568	Amphilophus_citrinellus
FBgn0027088	GlyRS	99	59.057	ENSACIG00000020797	gars	99	59.057	Amphilophus_citrinellus
FBgn0027088	GlyRS	73	57.948	ENSAOCG00000002479	gars	97	57.948	Amphiprion_ocellaris
FBgn0027088	GlyRS	99	61.481	ENSAOCG00000009108	gars	93	60.258	Amphiprion_ocellaris
FBgn0027088	GlyRS	99	61.481	ENSAPEG00000018850	gars	93	60.258	Amphiprion_percula
FBgn0027088	GlyRS	99	56.869	ENSAPEG00000018903	gars	98	56.869	Amphiprion_percula
FBgn0027088	GlyRS	99	60.059	ENSATEG00000008784	gars	99	61.912	Anabas_testudineus
FBgn0027088	GlyRS	68	62.284	ENSAPLG00000015638	-	100	62.284	Anas_platyrhynchos
FBgn0027088	GlyRS	99	59.084	ENSACAG00000005601	GARS	99	59.084	Anolis_carolinensis
FBgn0027088	GlyRS	100	60.294	ENSANAG00000022536	GARS	99	60.294	Aotus_nancymaae
FBgn0027088	GlyRS	99	61.037	ENSACLG00000027174	gars	93	59.856	Astatotilapia_calliptera
FBgn0027088	GlyRS	99	59.615	ENSACLG00000027158	gars	99	59.615	Astatotilapia_calliptera
FBgn0027088	GlyRS	99	56.296	ENSAMXG00000014895	gars	95	59.628	Astyanax_mexicanus
FBgn0027088	GlyRS	100	60.882	ENSBTAG00000018972	GARS	93	60.553	Bos_taurus
FBgn0027088	GlyRS	99	63.056	WBGene00001744	gars-1	99	63.056	Caenorhabditis_elegans
FBgn0027088	GlyRS	100	60.294	ENSCJAG00000008595	GARS	95	59.045	Callithrix_jacchus
FBgn0027088	GlyRS	99	60.266	ENSCAFG00000003086	GARS	86	59.942	Canis_familiaris
FBgn0027088	GlyRS	99	60.266	ENSCAFG00020004272	GARS	98	60.266	Canis_lupus_dingo
FBgn0027088	GlyRS	100	60.735	ENSCHIG00000016912	GARS	99	61.211	Capra_hircus
FBgn0027088	GlyRS	100	60.735	ENSTSYG00000008538	GARS	93	60.408	Carlito_syrichta
FBgn0027088	GlyRS	90	48.631	ENSCAPG00000007526	GARS	98	48.631	Cavia_aperea
FBgn0027088	GlyRS	98	59.639	ENSCPOG00000007547	GARS	91	59.639	Cavia_porcellus
FBgn0027088	GlyRS	100	60.294	ENSCCAG00000011512	GARS	93	59.768	Cebus_capucinus
FBgn0027088	GlyRS	100	60.294	ENSCATG00000036699	GARS	93	60.058	Cercocebus_atys
FBgn0027088	GlyRS	100	60.294	ENSCLAG00000007985	GARS	96	60.058	Chinchilla_lanigera
FBgn0027088	GlyRS	100	60.294	ENSCSAG00000014588	GARS	93	60.058	Chlorocebus_sabaeus
FBgn0027088	GlyRS	100	52.794	ENSCHOG00000003253	GARS	93	52.023	Choloepus_hoffmanni
FBgn0027088	GlyRS	98	59.488	ENSCPBG00000019482	GARS	91	59.488	Chrysemys_picta_bellii
FBgn0027088	GlyRS	99	56.509	ENSCING00000008937	-	100	56.509	Ciona_intestinalis
FBgn0027088	GlyRS	100	60.294	ENSCANG00000027727	GARS	93	60.058	Colobus_angolensis_palliatus
FBgn0027088	GlyRS	99	60.831	ENSCGRG00001020450	Gars	92	60.831	Cricetulus_griseus_chok1gshd
FBgn0027088	GlyRS	97	61.120	ENSCGRG00000008342	Gars	94	61.120	Cricetulus_griseus_crigri
FBgn0027088	GlyRS	99	54.586	ENSCSEG00000017654	gars	99	54.466	Cynoglossus_semilaevis
FBgn0027088	GlyRS	99	61.037	ENSCSEG00000017671	gars	90	61.037	Cynoglossus_semilaevis
FBgn0027088	GlyRS	100	60.735	ENSCVAG00000007149	gars	93	60.057	Cyprinodon_variegatus
FBgn0027088	GlyRS	99	60.741	ENSDARG00000059070	gars	98	60.741	Danio_rerio
FBgn0027088	GlyRS	100	60.441	ENSDNOG00000046478	GARS	99	60.856	Dasypus_novemcinctus
FBgn0027088	GlyRS	100	60.000	ENSDORG00000002672	Gars	93	60.000	Dipodomys_ordii
FBgn0027088	GlyRS	92	58.439	ENSETEG00000012196	GARS	97	58.439	Echinops_telfairi
FBgn0027088	GlyRS	71	62.292	ENSEBUG00000002254	gars	89	62.292	Eptatretus_burgeri
FBgn0027088	GlyRS	68	60.860	ENSEBUG00000002654	gars	84	60.860	Eptatretus_burgeri
FBgn0027088	GlyRS	100	60.735	ENSEASG00005000388	GARS	93	60.232	Equus_asinus_asinus
FBgn0027088	GlyRS	100	60.735	ENSECAG00000019373	GARS	93	60.232	Equus_caballus
FBgn0027088	GlyRS	99	61.037	ENSELUG00000003692	gars	90	61.037	Esox_lucius
FBgn0027088	GlyRS	100	60.294	ENSFCAG00000011415	GARS	81	59.971	Felis_catus
FBgn0027088	GlyRS	90	59.411	ENSFALG00000006550	GARS	99	59.411	Ficedula_albicollis
FBgn0027088	GlyRS	97	60.909	ENSFDAG00000014466	GARS	99	60.909	Fukomys_damarensis
FBgn0027088	GlyRS	100	61.324	ENSFHEG00000013189	gars	92	60.402	Fundulus_heteroclitus
FBgn0027088	GlyRS	92	56.822	ENSGMOG00000008856	-	99	56.822	Gadus_morhua
FBgn0027088	GlyRS	99	59.882	ENSGMOG00000010728	gars	93	58.883	Gadus_morhua
FBgn0027088	GlyRS	100	58.824	ENSGALG00000005694	GARS	99	58.824	Gallus_gallus
FBgn0027088	GlyRS	100	60.441	ENSGAFG00000005228	gars	90	60.441	Gambusia_affinis
FBgn0027088	GlyRS	99	61.037	ENSGACG00000003410	gars	93	59.599	Gasterosteus_aculeatus
FBgn0027088	GlyRS	90	59.477	ENSGAGG00000017755	GARS	98	59.477	Gopherus_agassizii
FBgn0027088	GlyRS	100	60.588	ENSGGOG00000004916	GARS	94	59.971	Gorilla_gorilla
FBgn0027088	GlyRS	99	59.467	ENSHBUG00000000815	gars	99	59.467	Haplochromis_burtoni
FBgn0027088	GlyRS	99	61.185	ENSHBUG00000016481	gars	93	60.000	Haplochromis_burtoni
FBgn0027088	GlyRS	100	60.588	ENSHGLG00000016342	GARS	93	59.913	Heterocephalus_glaber_female
FBgn0027088	GlyRS	100	60.000	ENSHGLG00100006787	GARS	97	59.334	Heterocephalus_glaber_male
FBgn0027088	GlyRS	52	49.003	ENSHCOG00000005286	gars	99	42.784	Hippocampus_comes
FBgn0027088	GlyRS	99	59.084	ENSHCOG00000005261	gars	99	59.084	Hippocampus_comes
FBgn0027088	GlyRS	99	58.667	ENSIPUG00000011443	gars	90	58.667	Ictalurus_punctatus
FBgn0027088	GlyRS	100	59.971	ENSSTOG00000015493	GARS	91	59.971	Ictidomys_tridecemlineatus
FBgn0027088	GlyRS	100	60.588	ENSJJAG00000022474	Gars	98	60.588	Jaculus_jaculus
FBgn0027088	GlyRS	99	61.481	ENSKMAG00000010428	gars	90	61.481	Kryptolebias_marmoratus
FBgn0027088	GlyRS	99	60.148	ENSLBEG00000019179	gars	99	60.148	Labrus_bergylta
FBgn0027088	GlyRS	57	53.747	ENSLBEG00000013122	-	99	53.747	Labrus_bergylta
FBgn0027088	GlyRS	99	61.630	ENSLBEG00000019228	gars	93	60.402	Labrus_bergylta
FBgn0027088	GlyRS	75	58.674	ENSLACG00000002810	GARS	98	58.674	Latimeria_chalumnae
FBgn0027088	GlyRS	99	61.481	ENSLOCG00000009688	gars	90	61.481	Lepisosteus_oculatus
FBgn0027088	GlyRS	100	60.735	ENSLAFG00000002496	GARS	99	59.738	Loxodonta_africana
FBgn0027088	GlyRS	100	60.294	ENSMFAG00000038863	GARS	93	60.058	Macaca_fascicularis
FBgn0027088	GlyRS	100	60.294	ENSMMUG00000004719	GARS	93	60.058	Macaca_mulatta
FBgn0027088	GlyRS	100	55.735	ENSMNEG00000043203	GARS	93	55.539	Macaca_nemestrina
FBgn0027088	GlyRS	100	60.294	ENSMLEG00000044430	GARS	93	60.058	Mandrillus_leucophaeus
FBgn0027088	GlyRS	99	60.889	ENSMAMG00000001894	gars	98	60.272	Mastacembelus_armatus
FBgn0027088	GlyRS	99	59.704	ENSMZEG00005019754	gars	99	59.704	Maylandia_zebra
FBgn0027088	GlyRS	99	61.185	ENSMZEG00005019740	gars	93	60.000	Maylandia_zebra
FBgn0027088	GlyRS	100	58.824	ENSMGAG00000003162	GARS	93	58.491	Meleagris_gallopavo
FBgn0027088	GlyRS	99	61.128	ENSMAUG00000016852	Gars	92	61.128	Mesocricetus_auratus
FBgn0027088	GlyRS	100	60.441	ENSMICG00000046006	GARS	99	60.441	Microcebus_murinus
FBgn0027088	GlyRS	99	61.276	ENSMOCG00000017680	Gars	92	61.276	Microtus_ochrogaster
FBgn0027088	GlyRS	99	58.407	ENSMMOG00000009695	gars	93	57.163	Mola_mola
FBgn0027088	GlyRS	99	60.444	ENSMALG00000006592	gars	86	59.483	Monopterus_albus
FBgn0027088	GlyRS	99	60.979	MGP_CAROLIEiJ_G0028410	Gars	95	59.885	Mus_caroli
FBgn0027088	GlyRS	99	60.979	ENSMUSG00000029777	Gars	92	60.979	Mus_musculus
FBgn0027088	GlyRS	99	60.831	MGP_PahariEiJ_G0022160	Gars	92	60.831	Mus_pahari
FBgn0027088	GlyRS	99	60.979	MGP_SPRETEiJ_G0029412	Gars	98	67.692	Mus_spretus
FBgn0027088	GlyRS	100	60.441	ENSMPUG00000005116	GARS	93	60.116	Mustela_putorius_furo
FBgn0027088	GlyRS	99	60.386	ENSMLUG00000002043	GARS	92	60.386	Myotis_lucifugus
FBgn0027088	GlyRS	99	60.979	ENSNGAG00000021844	Gars	94	60.408	Nannospalax_galili
FBgn0027088	GlyRS	57	53.608	ENSNBRG00000018643	gars	99	53.608	Neolamprologus_brichardi
FBgn0027088	GlyRS	99	61.333	ENSNBRG00000018585	gars	93	60.144	Neolamprologus_brichardi
FBgn0027088	GlyRS	100	60.441	ENSNLEG00000015152	GARS	94	59.827	Nomascus_leucogenys
FBgn0027088	GlyRS	97	55.000	ENSMEUG00000001741	GARS	99	55.000	Notamacropus_eugenii
FBgn0027088	GlyRS	86	65.163	ENSOPRG00000005342	GARS	80	64.532	Ochotona_princeps
FBgn0027088	GlyRS	100	59.854	ENSODEG00000008246	GARS	87	59.538	Octodon_degus
FBgn0027088	GlyRS	96	59.327	ENSOANG00000006262	GARS	89	59.174	Ornithorhynchus_anatinus
FBgn0027088	GlyRS	100	60.735	ENSOCUG00000005295	GARS	99	60.735	Oryctolagus_cuniculus
FBgn0027088	GlyRS	100	60.704	ENSORLG00000009470	gars	91	60.704	Oryzias_latipes
FBgn0027088	GlyRS	94	63.166	ENSORLG00020013036	gars	98	54.453	Oryzias_latipes_hni
FBgn0027088	GlyRS	99	61.778	ENSORLG00015012886	gars	90	61.778	Oryzias_latipes_hsok
FBgn0027088	GlyRS	57	51.928	ENSOMEG00000000133	gars	98	51.928	Oryzias_melastigma
FBgn0027088	GlyRS	100	60.294	ENSOGAG00000013321	GARS	93	59.971	Otolemur_garnettii
FBgn0027088	GlyRS	100	60.735	ENSOARG00000008017	GARS	93	60.408	Ovis_aries
FBgn0027088	GlyRS	100	60.294	ENSPPAG00000037266	GARS	94	59.768	Pan_paniscus
FBgn0027088	GlyRS	100	60.294	ENSPPRG00000001917	GARS	93	59.971	Panthera_pardus
FBgn0027088	GlyRS	100	60.294	ENSPTIG00000016096	GARS	99	60.294	Panthera_tigris_altaica
FBgn0027088	GlyRS	100	60.294	ENSPTRG00000019042	GARS	93	59.768	Pan_troglodytes
FBgn0027088	GlyRS	100	60.294	ENSPANG00000026231	GARS	93	60.058	Papio_anubis
FBgn0027088	GlyRS	99	60.593	ENSPKIG00000014863	gars	87	60.593	Paramormyrops_kingsleyae
FBgn0027088	GlyRS	97	59.758	ENSPSIG00000010935	GARS	98	59.758	Pelodiscus_sinensis
FBgn0027088	GlyRS	57	53.435	ENSPMGG00000023648	gars	99	53.435	Periophthalmus_magnuspinnatus
FBgn0027088	GlyRS	99	58.892	ENSPMGG00000023644	gars	90	58.892	Periophthalmus_magnuspinnatus
FBgn0027088	GlyRS	97	61.212	ENSPEMG00000019930	Gars	99	61.212	Peromyscus_maniculatus_bairdii
FBgn0027088	GlyRS	99	58.997	ENSPMAG00000006586	gars	98	58.997	Petromyzon_marinus
FBgn0027088	GlyRS	100	58.529	ENSPCIG00000017010	GARS	89	58.529	Phascolarctos_cinereus
FBgn0027088	GlyRS	100	60.588	ENSPFOG00000004593	gars	90	60.588	Poecilia_formosa
FBgn0027088	GlyRS	100	60.441	ENSPLAG00000008038	gars	90	60.441	Poecilia_latipinna
FBgn0027088	GlyRS	100	60.735	ENSPMEG00000005901	gars	90	60.735	Poecilia_mexicana
FBgn0027088	GlyRS	100	60.294	ENSPREG00000020960	gars	90	59.312	Poecilia_reticulata
FBgn0027088	GlyRS	100	59.853	ENSPPYG00000017673	GARS	93	58.900	Pongo_abelii
FBgn0027088	GlyRS	100	59.412	ENSPCAG00000007199	GARS	92	59.098	Procavia_capensis
FBgn0027088	GlyRS	100	59.412	ENSPCOG00000008887	GARS	93	59.098	Propithecus_coquereli
FBgn0027088	GlyRS	100	60.294	ENSPVAG00000013565	GARS	93	60.116	Pteropus_vampyrus
FBgn0027088	GlyRS	99	61.037	ENSPNYG00000005017	gars	93	59.856	Pundamilia_nyererei
FBgn0027088	GlyRS	99	59.615	ENSPNYG00000004960	gars	99	59.615	Pundamilia_nyererei
FBgn0027088	GlyRS	99	60.148	ENSPNAG00000020164	gars	91	60.148	Pygocentrus_nattereri
FBgn0027088	GlyRS	99	61.128	ENSRNOG00000011052	Gars	92	61.128	Rattus_norvegicus
FBgn0027088	GlyRS	99	58.754	ENSRBIG00000040287	GARS	93	58.163	Rhinopithecus_bieti
FBgn0027088	GlyRS	99	60.831	ENSRROG00000044600	GARS	93	60.204	Rhinopithecus_roxellana
FBgn0027088	GlyRS	91	47.706	YBR121C	GRS1	98	48.012	Saccharomyces_cerevisiae
FBgn0027088	GlyRS	89	49.100	YPR081C	-	94	50.769	Saccharomyces_cerevisiae
FBgn0027088	GlyRS	100	60.147	ENSSBOG00000022287	GARS	93	59.624	Saimiri_boliviensis_boliviensis
FBgn0027088	GlyRS	99	55.637	ENSSHAG00000003419	GARS	99	55.637	Sarcophilus_harrisii
FBgn0027088	GlyRS	99	61.185	ENSSFOG00015000573	gars	92	59.433	Scleropages_formosus
FBgn0027088	GlyRS	99	60.741	ENSSMAG00000013672	gars	92	59.684	Scophthalmus_maximus
FBgn0027088	GlyRS	99	60.741	ENSSMAG00000013709	gars	99	60.741	Scophthalmus_maximus
FBgn0027088	GlyRS	99	51.846	ENSSDUG00000016758	gars	99	51.846	Seriola_dumerili
FBgn0027088	GlyRS	99	60.741	ENSSDUG00000016795	gars	93	59.541	Seriola_dumerili
FBgn0027088	GlyRS	99	60.593	ENSSLDG00000014279	gars	93	59.397	Seriola_lalandi_dorsalis
FBgn0027088	GlyRS	99	60.000	ENSSLDG00000014238	gars	99	60.000	Seriola_lalandi_dorsalis
FBgn0027088	GlyRS	75	57.249	ENSSARG00000008410	GARS	82	57.249	Sorex_araneus
FBgn0027088	GlyRS	99	60.148	ENSSPUG00000001815	-	92	59.361	Sphenodon_punctatus
FBgn0027088	GlyRS	99	57.630	ENSSPAG00000012003	gars	92	56.528	Stegastes_partitus
FBgn0027088	GlyRS	99	60.979	ENSSSCG00000016677	GARS	92	60.262	Sus_scrofa
FBgn0027088	GlyRS	97	58.195	ENSTGUG00000000364	GARS	99	58.195	Taeniopygia_guttata
FBgn0027088	GlyRS	99	60.889	ENSTRUG00000017557	gars	93	59.770	Takifugu_rubripes
FBgn0027088	GlyRS	99	60.444	ENSTNIG00000012738	gars	98	59.254	Tetraodon_nigroviridis
FBgn0027088	GlyRS	92	56.661	ENSTBEG00000008972	GARS	83	56.661	Tupaia_belangeri
FBgn0027088	GlyRS	97	61.061	ENSTTRG00000000334	GARS	99	61.061	Tursiops_truncatus
FBgn0027088	GlyRS	100	60.588	ENSUAMG00000016756	GARS	93	60.262	Ursus_americanus
FBgn0027088	GlyRS	98	60.210	ENSUMAG00000002158	GARS	99	60.720	Ursus_maritimus
FBgn0027088	GlyRS	100	56.029	ENSVPAG00000009438	GARS	96	55.158	Vicugna_pacos
FBgn0027088	GlyRS	99	60.266	ENSVVUG00000020981	GARS	87	60.266	Vulpes_vulpes
FBgn0027088	GlyRS	100	59.884	ENSXETG00000018474	gars	94	59.207	Xenopus_tropicalis
FBgn0027088	GlyRS	100	59.211	ENSXCOG00000010005	gars	90	59.211	Xiphophorus_couchianus
FBgn0027088	GlyRS	100	60.294	ENSXMAG00000009402	gars	89	60.294	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0004820	glycine-tRNA ligase activity	21873635.	IBA	Function
GO:0004820	glycine-tRNA ligase activity	26761199.	TAS	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0005737	cytoplasm	17529987.	IDA	Component
GO:0005737	cytoplasm	26761199.	TAS	Component
GO:0005739	mitochondrion	21873635.	IBA	Component
GO:0005739	mitochondrion	17529987.	IDA	Component
GO:0005739	mitochondrion	26761199.	TAS	Component
GO:0006426	glycyl-tRNA aminoacylation	21873635.	IBA	Process
GO:0006426	glycyl-tRNA aminoacylation	26761199.	TAS	Process
GO:0035167	larval lymph gland hemopoiesis	25201876.	IMP	Process
GO:0048813	dendrite morphogenesis	17529987.	IMP	Process
GO:0070150	mitochondrial glycyl-tRNA aminoacylation	21873635.	IBA	Process