EuRBPDB

Description

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0027291 (Gene tree)
Gene ID: 32940
Gene Symbol: l(1)G0156
Alias: -
Full Name: lethal (1) G0156
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Minus strand
Length: 3383
Position: chrX: 19518428-19521810
Accession: FBgn0027291
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27378189	Global changes of the RNA bound proteome during the maternal-to-zygotic transition in Drosophila	IC & embryos.MZT	2016 Jul 5	Sysoev VO	DOI: 10.1038/ncomms12128
27197210	The mRNA-bound proteome of the early fly embryo	IC & embryos	2016 Apr 28	Wessels HH	DOI: 10.1101/gr.200386.115

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0307904	-	2029	-	FBpp0300338	354 (aa)	-	Q9VWH4-2
FBtr0336668	-	1395	-	FBpp0307649	377 (aa)	-	Q9VWH4
FBtr0074780	-	1332	-	FBpp0074549	354 (aa)	-	Q9VWH4-2

Gene Model

Click here to download FBgn0027291's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0027291's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0027291	l(1)G0156	100	70.141	WBGene00009664	idha-1	99	70.141	Caenorhabditis_elegans
FBgn0027291	l(1)G0156	97	40.220	WBGene00007993	idhb-1	94	40.220	Caenorhabditis_elegans
FBgn0027291	l(1)G0156	99	42.577	FBgn0038922	Idh3b	94	42.577	Drosophila_melanogaster
FBgn0027291	l(1)G0156	97	70.845	ENSMUSG00000032279	Idh3a	94	70.845	Mus_musculus
FBgn0027291	l(1)G0156	100	47.238	YNL037C		99	47.238	Saccharomyces_cerevisiae
FBgn0027291	l(1)G0156	97	35.440	YIL094C	LYS12	96	35.440	Saccharomyces_cerevisiae

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000287	magnesium ion binding	-	IEA	Function
GO:0004449	isocitrate dehydrogenase (NAD+) activity	-	ISS	Function
GO:0005739	mitochondrion	16212416.19317464.	HDA	Component
GO:0005739	mitochondrion	-	ISS	Component
GO:0006099	tricarboxylic acid cycle	-	ISS	Process
GO:0051287	NAD binding	-	IEA	Function