EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0027330 (Gene tree)
Gene ID: 31811
Gene Symbol: l(1)G0020
Alias: -
Full Name: lethal (1) G0020
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: confidence
Strand: Minus strand
Length: 3565 bases
Position: chrX:8716713-8720277
Accession: FBgn0027330
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0310578	tRNA_bind_2	PF13725.6	5.6e-65	1	1
FBpp0071217	tRNA_bind_2	PF13725.6	5.9e-65	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27197210	The mRNA-bound proteome of the early fly embryo	IC & embryos	2016 Apr 28	Wessels HH	DOI: 10.1101/gr.200386.115

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0344164	-	3250	-	FBpp0310578	967 (aa)	-	A9YK42
FBtr0071280	-	3246	-	FBpp0071217	1008 (aa)	-	Q9W3C1

Gene Model

Click here to download FBgn0027330's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0027330's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0027330	l(1)G0020	99	52.947	ENSG00000135372	NAT10	100	59.589	Homo_sapiens
FBgn0027330	l(1)G0020	99	52.700	ENSAPOG00000010634	nat10	94	53.144	Acanthochromis_polyacanthus
FBgn0027330	l(1)G0020	99	52.947	ENSAMEG00000008124	NAT10	95	53.347	Ailuropoda_melanoleuca
FBgn0027330	l(1)G0020	99	50.951	ENSACIG00000017852	nat10	94	51.269	Amphilophus_citrinellus
FBgn0027330	l(1)G0020	99	52.600	ENSAOCG00000004556	nat10	94	53.043	Amphiprion_ocellaris
FBgn0027330	l(1)G0020	99	52.600	ENSAPEG00000001116	nat10	94	53.043	Amphiprion_percula
FBgn0027330	l(1)G0020	99	52.500	ENSATEG00000015592	nat10	97	52.409	Anabas_testudineus
FBgn0027330	l(1)G0020	96	51.606	ENSAPLG00000007638	NAT10	96	52.000	Anas_platyrhynchos
FBgn0027330	l(1)G0020	99	51.796	ENSACAG00000013465	NAT10	96	52.280	Anolis_carolinensis
FBgn0027330	l(1)G0020	99	52.947	ENSANAG00000026850	NAT10	95	53.347	Aotus_nancymaae
FBgn0027330	l(1)G0020	99	51.900	ENSACLG00000007336	nat10	94	52.333	Astatotilapia_calliptera
FBgn0027330	l(1)G0020	99	52.300	ENSAMXG00000038087	nat10	99	53.038	Astyanax_mexicanus
FBgn0027330	l(1)G0020	99	53.593	ENSBTAG00000016747	NAT10	95	54.002	Bos_taurus
FBgn0027330	l(1)G0020	99	48.177	WBGene00018866	nath-10	98	47.573	Caenorhabditis_elegans
FBgn0027330	l(1)G0020	99	53.447	ENSCJAG00000010585	NAT10	95	53.854	Callithrix_jacchus
FBgn0027330	l(1)G0020	99	53.147	ENSCAFG00000007028	NAT10	95	53.550	Canis_familiaris
FBgn0027330	l(1)G0020	100	53.194	ENSCAFG00020004530	NAT10	99	53.550	Canis_lupus_dingo
FBgn0027330	l(1)G0020	99	53.194	ENSCHIG00000026081	NAT10	95	53.597	Capra_hircus
FBgn0027330	l(1)G0020	99	51.948	ENSTSYG00000013519	NAT10	95	52.434	Carlito_syrichta
FBgn0027330	l(1)G0020	99	53.792	ENSCPOG00000015736	NAT10	95	53.909	Cavia_porcellus
FBgn0027330	l(1)G0020	99	53.047	ENSCCAG00000003512	NAT10	95	53.448	Cebus_capucinus
FBgn0027330	l(1)G0020	99	53.047	ENSCATG00000037820	NAT10	95	53.448	Cercocebus_atys
FBgn0027330	l(1)G0020	99	53.047	ENSCLAG00000016692	NAT10	95	53.550	Chinchilla_lanigera
FBgn0027330	l(1)G0020	99	52.947	ENSCSAG00000005383	NAT10	95	53.347	Chlorocebus_sabaeus
FBgn0027330	l(1)G0020	92	45.015	ENSCHOG00000001629	NAT10	88	45.015	Choloepus_hoffmanni
FBgn0027330	l(1)G0020	100	52.248	ENSCPBG00000012518	NAT10	98	52.690	Chrysemys_picta_bellii
FBgn0027330	l(1)G0020	95	51.458	ENSCING00000003567	-	100	51.458	Ciona_intestinalis
FBgn0027330	l(1)G0020	99	52.947	ENSCANG00000033310	NAT10	95	53.347	Colobus_angolensis_palliatus
FBgn0027330	l(1)G0020	100	52.695	ENSCGRG00001010534	NAT10	99	53.144	Cricetulus_griseus_chok1gshd
FBgn0027330	l(1)G0020	99	52.647	ENSCGRG00000012271	NAT10	95	53.144	Cricetulus_griseus_crigri
FBgn0027330	l(1)G0020	99	53.100	ENSCSEG00000013106	nat10	97	52.849	Cynoglossus_semilaevis
FBgn0027330	l(1)G0020	99	52.753	ENSDARG00000054259	nat10	95	53.198	Danio_rerio
FBgn0027330	l(1)G0020	99	52.684	ENSDNOG00000042452	NAT10	95	53.078	Dasypus_novemcinctus
FBgn0027330	l(1)G0020	99	53.041	ENSDORG00000006567	Nat10	95	53.441	Dipodomys_ordii
FBgn0027330	l(1)G0020	60	55.556	ENSETEG00000020037	-	62	55.556	Echinops_telfairi
FBgn0027330	l(1)G0020	99	52.472	ENSEBUG00000012661	nat10	96	52.530	Eptatretus_burgeri
FBgn0027330	l(1)G0020	99	53.247	ENSEASG00005020208	NAT10	95	53.651	Equus_asinus_asinus
FBgn0027330	l(1)G0020	99	52.947	ENSECAG00000011621	NAT10	99	54.171	Equus_caballus
FBgn0027330	l(1)G0020	94	59.677	ENSEEUG00000006899	NAT10	89	59.677	Erinaceus_europaeus
FBgn0027330	l(1)G0020	99	52.305	ENSELUG00000000189	nat10	94	52.947	Esox_lucius
FBgn0027330	l(1)G0020	99	52.847	ENSFCAG00000002028	NAT10	95	53.245	Felis_catus
FBgn0027330	l(1)G0020	99	51.900	ENSFALG00000001264	NAT10	93	52.386	Ficedula_albicollis
FBgn0027330	l(1)G0020	99	53.347	ENSFDAG00000010525	NAT10	95	53.854	Fukomys_damarensis
FBgn0027330	l(1)G0020	99	52.800	ENSFHEG00000009197	NAT10	94	53.144	Fundulus_heteroclitus
FBgn0027330	l(1)G0020	99	49.800	ENSGMOG00000002783	nat10	95	50.203	Gadus_morhua
FBgn0027330	l(1)G0020	99	52.000	ENSGALG00000014573	NAT10	96	52.386	Gallus_gallus
FBgn0027330	l(1)G0020	99	51.900	ENSGACG00000009849	nat10	94	52.333	Gasterosteus_aculeatus
FBgn0027330	l(1)G0020	99	52.104	ENSGAGG00000002160	NAT10	97	51.267	Gopherus_agassizii
FBgn0027330	l(1)G0020	99	53.047	ENSGGOG00000014560	NAT10	95	53.448	Gorilla_gorilla
FBgn0027330	l(1)G0020	99	51.900	ENSHBUG00000003769	nat10	94	52.333	Haplochromis_burtoni
FBgn0027330	l(1)G0020	99	53.047	ENSHGLG00000016891	NAT10	95	53.550	Heterocephalus_glaber_female
FBgn0027330	l(1)G0020	99	53.047	ENSHGLG00100016949	NAT10	95	53.550	Heterocephalus_glaber_male
FBgn0027330	l(1)G0020	99	52.204	ENSHCOG00000016765	nat10	94	52.642	Hippocampus_comes
FBgn0027330	l(1)G0020	99	53.047	ENSSTOG00000001817	-	95	53.448	Ictidomys_tridecemlineatus
FBgn0027330	l(1)G0020	99	52.847	ENSJJAG00000023042	Nat10	95	53.245	Jaculus_jaculus
FBgn0027330	l(1)G0020	99	52.100	ENSKMAG00000001467	nat10	94	52.535	Kryptolebias_marmoratus
FBgn0027330	l(1)G0020	99	52.200	ENSLBEG00000013233	nat10	94	52.535	Labrus_bergylta
FBgn0027330	l(1)G0020	99	53.141	ENSLACG00000004636	NAT10	95	53.488	Latimeria_chalumnae
FBgn0027330	l(1)G0020	99	52.438	ENSLOCG00000002896	nat10	98	53.078	Lepisosteus_oculatus
FBgn0027330	l(1)G0020	99	52.542	ENSLAFG00000012393	NAT10	95	52.935	Loxodonta_africana
FBgn0027330	l(1)G0020	99	52.947	ENSMFAG00000041013	NAT10	95	53.347	Macaca_fascicularis
FBgn0027330	l(1)G0020	99	52.947	ENSMMUG00000021646	NAT10	95	53.347	Macaca_mulatta
FBgn0027330	l(1)G0020	99	52.847	ENSMNEG00000041284	NAT10	95	53.245	Macaca_nemestrina
FBgn0027330	l(1)G0020	99	50.200	ENSMLEG00000017199	NAT10	95	50.558	Mandrillus_leucophaeus
FBgn0027330	l(1)G0020	99	52.200	ENSMAMG00000000316	nat10	94	52.535	Mastacembelus_armatus
FBgn0027330	l(1)G0020	99	51.800	ENSMZEG00005004998	nat10	94	52.231	Maylandia_zebra
FBgn0027330	l(1)G0020	94	52.013	ENSMGAG00000010206	NAT10	94	52.013	Meleagris_gallopavo
FBgn0027330	l(1)G0020	80	50.744	ENSMAUG00000010653	-	98	50.809	Mesocricetus_auratus
FBgn0027330	l(1)G0020	99	51.996	ENSMICG00000003627	NAT10	99	52.524	Microcebus_murinus
FBgn0027330	l(1)G0020	99	52.647	ENSMOCG00000021454	Nat10	95	53.144	Microtus_ochrogaster
FBgn0027330	l(1)G0020	82	53.390	ENSMMOG00000012266	nat10	91	53.632	Mola_mola
FBgn0027330	l(1)G0020	99	53.141	ENSMODG00000009890	NAT10	95	53.644	Monodelphis_domestica
FBgn0027330	l(1)G0020	99	51.200	ENSMALG00000008766	nat10	96	51.239	Monopterus_albus
FBgn0027330	l(1)G0020	99	53.247	ENSMUSG00000027185	Nat10	95	53.753	Mus_musculus
FBgn0027330	l(1)G0020	99	52.747	MGP_PahariEiJ_G0025454	Nat10	95	53.245	Mus_pahari
FBgn0027330	l(1)G0020	99	53.247	MGP_SPRETEiJ_G0024928	Nat10	95	53.753	Mus_spretus
FBgn0027330	l(1)G0020	99	53.247	ENSMPUG00000011636	NAT10	95	53.651	Mustela_putorius_furo
FBgn0027330	l(1)G0020	99	52.234	ENSMLUG00000016473	NAT10	95	52.621	Myotis_lucifugus
FBgn0027330	l(1)G0020	99	52.747	ENSNGAG00000013486	Nat10	95	53.144	Nannospalax_galili
FBgn0027330	l(1)G0020	99	51.900	ENSNBRG00000002262	nat10	95	52.333	Neolamprologus_brichardi
FBgn0027330	l(1)G0020	99	53.247	ENSNLEG00000017916	NAT10	98	52.524	Nomascus_leucogenys
FBgn0027330	l(1)G0020	63	61.667	ENSMEUG00000012722	-	65	61.667	Notamacropus_eugenii
FBgn0027330	l(1)G0020	99	52.647	ENSOPRG00000009758	NAT10	99	53.043	Ochotona_princeps
FBgn0027330	l(1)G0020	99	53.347	ENSODEG00000017069	NAT10	95	53.854	Octodon_degus
FBgn0027330	l(1)G0020	99	52.000	ENSONIG00000008445	nat10	94	52.434	Oreochromis_niloticus
FBgn0027330	l(1)G0020	100	52.295	ENSOANG00000007400	-	99	52.535	Ornithorhynchus_anatinus
FBgn0027330	l(1)G0020	99	52.847	ENSOCUG00000001398	NAT10	99	53.245	Oryctolagus_cuniculus
FBgn0027330	l(1)G0020	99	52.200	ENSORLG00000004830	nat10	94	52.840	Oryzias_latipes
FBgn0027330	l(1)G0020	99	52.100	ENSORLG00020012458	nat10	94	52.738	Oryzias_latipes_hni
FBgn0027330	l(1)G0020	99	52.300	ENSORLG00015005731	nat10	94	52.738	Oryzias_latipes_hsok
FBgn0027330	l(1)G0020	99	52.800	ENSOMEG00000013901	nat10	94	54.123	Oryzias_melastigma
FBgn0027330	l(1)G0020	99	53.147	ENSOGAG00000016737	NAT10	95	53.550	Otolemur_garnettii
FBgn0027330	l(1)G0020	99	53.293	ENSOARG00000018290	NAT10	95	53.698	Ovis_aries
FBgn0027330	l(1)G0020	99	53.047	ENSPPAG00000036069	NAT10	95	53.448	Pan_paniscus
FBgn0027330	l(1)G0020	99	52.847	ENSPPRG00000010254	NAT10	95	53.245	Panthera_pardus
FBgn0027330	l(1)G0020	99	52.847	ENSPTIG00000010705	NAT10	95	53.245	Panthera_tigris_altaica
FBgn0027330	l(1)G0020	99	53.047	ENSPTRG00000003494	NAT10	95	53.448	Pan_troglodytes
FBgn0027330	l(1)G0020	99	53.047	ENSPANG00000013723	NAT10	95	53.448	Papio_anubis
FBgn0027330	l(1)G0020	99	52.348	ENSPKIG00000004093	nat10	97	52.475	Paramormyrops_kingsleyae
FBgn0027330	l(1)G0020	99	52.300	ENSPSIG00000006469	NAT10	96	52.690	Pelodiscus_sinensis
FBgn0027330	l(1)G0020	99	52.947	ENSPEMG00000009451	Nat10	95	53.448	Peromyscus_maniculatus_bairdii
FBgn0027330	l(1)G0020	99	52.923	ENSPMAG00000003621	nat10	95	53.084	Petromyzon_marinus
FBgn0027330	l(1)G0020	99	52.547	ENSPCIG00000026378	NAT10	95	52.941	Phascolarctos_cinereus
FBgn0027330	l(1)G0020	99	52.200	ENSPFOG00000012532	nat10	94	52.637	Poecilia_formosa
FBgn0027330	l(1)G0020	99	52.100	ENSPLAG00000014361	nat10	94	52.535	Poecilia_latipinna
FBgn0027330	l(1)G0020	99	52.200	ENSPMEG00000003182	nat10	94	52.637	Poecilia_mexicana
FBgn0027330	l(1)G0020	96	50.312	ENSPREG00000016112	nat10	96	50.686	Poecilia_reticulata
FBgn0027330	l(1)G0020	87	48.059	ENSPCAG00000004327	NAT10	86	48.432	Procavia_capensis
FBgn0027330	l(1)G0020	99	53.047	ENSPCOG00000009633	NAT10	95	53.448	Propithecus_coquereli
FBgn0027330	l(1)G0020	89	59.811	ENSPVAG00000005560	NAT10	86	59.811	Pteropus_vampyrus
FBgn0027330	l(1)G0020	99	51.900	ENSPNYG00000021872	nat10	94	52.333	Pundamilia_nyererei
FBgn0027330	l(1)G0020	99	53.053	ENSPNAG00000019299	nat10	95	53.401	Pygocentrus_nattereri
FBgn0027330	l(1)G0020	99	52.747	ENSRNOG00000008663	Nat10	95	53.245	Rattus_norvegicus
FBgn0027330	l(1)G0020	99	53.047	ENSRBIG00000028922	NAT10	95	53.448	Rhinopithecus_bieti
FBgn0027330	l(1)G0020	99	52.947	ENSRROG00000011811	NAT10	95	53.347	Rhinopithecus_roxellana
FBgn0027330	l(1)G0020	99	47.476	YNL132W	-	95	47.671	Saccharomyces_cerevisiae
FBgn0027330	l(1)G0020	99	53.447	ENSSBOG00000023643	NAT10	95	53.854	Saimiri_boliviensis_boliviensis
FBgn0027330	l(1)G0020	94	53.481	ENSSHAG00000003443	NAT10	100	53.871	Sarcophilus_harrisii
FBgn0027330	l(1)G0020	99	53.153	ENSSFOG00015015371	nat10	95	53.604	Scleropages_formosus
FBgn0027330	l(1)G0020	99	52.600	ENSSMAG00000010588	nat10	97	52.507	Scophthalmus_maximus
FBgn0027330	l(1)G0020	99	52.500	ENSSDUG00000021879	nat10	96	52.626	Seriola_dumerili
FBgn0027330	l(1)G0020	99	52.200	ENSSLDG00000005278	nat10	96	52.329	Seriola_lalandi_dorsalis
FBgn0027330	l(1)G0020	63	64.407	ENSSARG00000013457	NAT10	81	64.407	Sorex_araneus
FBgn0027330	l(1)G0020	99	51.900	ENSSPUG00000010599	-	96	52.386	Sphenodon_punctatus
FBgn0027330	l(1)G0020	99	52.400	ENSSPAG00000013867	nat10	94	52.840	Stegastes_partitus
FBgn0027330	l(1)G0020	99	52.647	ENSSSCG00000013304	NAT10	96	55.716	Sus_scrofa
FBgn0027330	l(1)G0020	99	52.000	ENSTGUG00000005638	-	96	52.487	Taeniopygia_guttata
FBgn0027330	l(1)G0020	99	52.000	ENSTRUG00000017064	nat10	97	51.917	Takifugu_rubripes
FBgn0027330	l(1)G0020	99	52.300	ENSTNIG00000016044	nat10	97	52.059	Tetraodon_nigroviridis
FBgn0027330	l(1)G0020	84	77.049	ENSTBEG00000010311	NAT10	82	77.049	Tupaia_belangeri
FBgn0027330	l(1)G0020	86	80.328	ENSTTRG00000007748	NAT10	82	80.328	Tursiops_truncatus
FBgn0027330	l(1)G0020	99	52.847	ENSUAMG00000010017	NAT10	98	52.549	Ursus_americanus
FBgn0027330	l(1)G0020	99	52.847	ENSUMAG00000018144	NAT10	98	52.549	Ursus_maritimus
FBgn0027330	l(1)G0020	100	53.194	ENSVVUG00000010185	NAT10	99	53.550	Vulpes_vulpes
FBgn0027330	l(1)G0020	99	51.600	ENSXETG00000003782	nat10	95	51.927	Xenopus_tropicalis
FBgn0027330	l(1)G0020	82	54.722	ENSXCOG00000016365	nat10	89	54.722	Xiphophorus_couchianus
FBgn0027330	l(1)G0020	99	52.300	ENSXMAG00000007325	nat10	94	52.738	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005524	ATP binding	-	IEA	Function
GO:0005730	nucleolus	21873635.	IBA	Component
GO:0016573	histone acetylation	25578876.	IMP	Process
GO:1904812	rRNA acetylation involved in maturation of SSU-rRNA	21873635.	IBA	Process
GO:1990883	rRNA cytidine N-acetyltransferase activity	21873635.	IBA	Function