EuRBPDB

Description

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0027338 (Gene tree)
Gene ID: 41158
Gene Symbol: Kap-alpha3
Alias: -
Full Name: karyopherin alpha3
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Minus strand
Length: 3250
Position: chr3R: 9574484-9577733
Accession: FBgn0027338
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27378189	Global changes of the RNA bound proteome during the maternal-to-zygotic transition in Drosophila	IC & embryos.MZT	2016 Jul 5	Sysoev VO	DOI: 10.1038/ncomms12128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0082106	-	2280	-	FBpp0081584	514 (aa)	-	Q9V455
FBtr0082107	-	2728	-	FBpp0081585	514 (aa)	-	Q9V455
FBtr0082108	-	2663	-	FBpp0081586	514 (aa)	-	Q9V455
FBtr0301189	-	2261	-	FBpp0290407	514 (aa)	-	O76522

Gene Model

Click here to download FBgn0027338's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0027338's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0027338	Kap-alpha3	96	61.972	WBGene00002074	ima-3	96	61.972	Caenorhabditis_elegans
FBgn0027338	Kap-alpha3	100	44.656	FBgn0267727	Pen	100	44.551	Drosophila_melanogaster
FBgn0027338	Kap-alpha3	99	67.954	ENSG00000102753	KPNA3	99	67.892	Homo_sapiens
FBgn0027338	Kap-alpha3	99	45.265	ENSG00000025800	KPNA6	98	45.265	Homo_sapiens
FBgn0027338	Kap-alpha3	96	45.753	ENSG00000114030	KPNA1	98	45.342	Homo_sapiens
FBgn0027338	Kap-alpha3	99	44.717	YNL189W	SRP1	97	44.173	Saccharomyces_cerevisiae

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005112	Notch binding	23840889.	IDA	Function
GO:0005634	nucleus	-	IEA	Component
GO:0005737	cytoplasm	-	IEA	Component
GO:0006606	protein import into nucleus	-	IEA	Process
GO:0008565	protein transporter activity	-	IEA	Function
GO:0009411	response to UV	18054857.	IDA	Process
GO:0017022	myosin binding	18045836.	IPI	Function
GO:0061608	nuclear import signal receptor activity	-	IEA	Function