EuRBPDB

Description

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0027580 (Gene tree)
Gene ID: 36020
Gene Symbol: PCB
Alias: -
Full Name: Pyruvate carboxylase
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Minus strand
Length: 10841
Position: chr2R: 9850703-9861543
Accession: FBgn0027580
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27197210	The mRNA-bound proteome of the early fly embryo	IC & embryos	2016 Apr 28	Wessels HH	DOI: 10.1101/gr.200386.115

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0088456	-	4276	-	FBpp0087541	1181 (aa)	-	Q7KN97
FBtr0088460	-	4191	-	FBpp0087545	1197 (aa)	-	Q0E9E2
FBtr0088457	-	4398	-	FBpp0087542	1181 (aa)	-	Q7KN97
FBtr0088454	-	4149	-	FBpp0087539	1197 (aa)	-	Q0E9E2
FBtr0088455	-	4101	-	FBpp0087540	1181 (aa)	-	Q7KN97
FBtr0088461	-	4256	-	FBpp0087546	1197 (aa)	-	Q0E9E2
FBtr0300850	-	4374	-	FBpp0290074	1197 (aa)	-	Q0E9E2
FBtr0088462	-	4208	-	FBpp0087547	1181 (aa)	-	Q7KN97
FBtr0088458	-	4446	-	FBpp0087543	1197 (aa)	-	Q0E9E2
FBtr0088459	-	4143	-	FBpp0087544	1181 (aa)	-	Q7KN97

Gene Model

Click here to download FBgn0027580's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0027580's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0027580	PCB	97	54.514	YGL062W		97	54.514	Saccharomyces_cerevisiae

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0004736	pyruvate carboxylase activity	21873635.	IBA	Function
GO:0004736	pyruvate carboxylase activity	25447741.	IDA	Function
GO:0004736	pyruvate carboxylase activity	-	ISS	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0005739	mitochondrion	19317464.	HDA	Component
GO:0005759	mitochondrial matrix	-	ISS	Component
GO:0006090	pyruvate metabolic process	21873635.	IBA	Process
GO:0006090	pyruvate metabolic process	-	ISS	Process
GO:0006094	gluconeogenesis	21873635.	IBA	Process
GO:0009374	biotin binding	-	IEA	Function
GO:0046872	metal ion binding	-	IEA	Function