EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Gene Ontology

Description

Ensembl ID: FBgn0027616 (Gene tree)
Gene ID: 38420
Gene Symbol: YT521-B
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: confidence
Strand: Minus strand
Length: 3720 bases
Position: chr3L:3370451-3374170
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0072941	YTH	PF04146.15	2e-39	1	1
FBpp0072940	YTH	PF04146.15	2.1e-39	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27378189	Global changes of the RNA bound proteome during the maternal-to-zygotic transition in Drosophila	IC & embryos.MZT	2016 Jul 5	Sysoev VO	DOI: 10.1038/ncomms12128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0073078	-	3452	-	FBpp0072940	721 (aa)	-	Q8IH35
FBtr0073079	-	2502	-	FBpp0072941	710 (aa)	-	Q8IRD2

Gene Model

Click here to download FBgn0027616's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0027616's network

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000381	regulation of alternative mRNA splicing, via spliceosome	28675155.	IDA	Process
GO:0000381	regulation of alternative mRNA splicing, via spliceosome	27919077.27919081.	IMP	Process
GO:0003723	RNA binding	-	ISS	Function
GO:0003729	mRNA binding	27919081.	IDA	Function
GO:0005634	nucleus	27919077.27919081.28675155.	IDA	Component
GO:0007530	sex determination	27919081.	IGI	Process
GO:0016070	RNA metabolic process	-	ISS	Process
GO:0016604	nuclear body	-	ISS	Component
GO:0036002	pre-mRNA binding	28675155.	IDA	Function
GO:1990247	N6-methyladenosine-containing RNA binding	27919077.28675155.	IDA	Function