EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0027784 (Gene tree)
Gene ID: 42285
Gene Symbol: Prp18
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Minus strand
Length: 1304 bases
Position: chr3R:19029968-19031271
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0083131	PRP4	PF08799.11	3.7e-11	1	1
FBpp0083131	Prp18	PF02840.15	6.8e-60	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0083717	-	1304	-	FBpp0083131	340 (aa)	-	Q9V437

Gene Model

Click here to download FBgn0027784's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0027784's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0027784	Prp18	98	51.327	ENSG00000165630	PRPF18	99	51.622	Homo_sapiens
FBgn0027784	Prp18	98	52.738	ENSAPOG00000024177	prpf18	99	53.890	Acanthochromis_polyacanthus
FBgn0027784	Prp18	98	51.032	ENSAMEG00000013591	-	99	51.327	Ailuropoda_melanoleuca
FBgn0027784	Prp18	98	52.071	ENSACIG00000001186	prpf18	99	52.663	Amphilophus_citrinellus
FBgn0027784	Prp18	99	50.712	ENSAOCG00000006572	prpf18	96	51.852	Amphiprion_ocellaris
FBgn0027784	Prp18	98	52.663	ENSAPEG00000004564	prpf18	99	53.602	Amphiprion_percula
FBgn0027784	Prp18	98	51.479	ENSATEG00000000303	prpf18	99	52.367	Anabas_testudineus
FBgn0027784	Prp18	97	50.148	ENSAPLG00000003387	-	99	50.148	Anas_platyrhynchos
FBgn0027784	Prp18	98	51.026	ENSACAG00000000818	-	99	51.320	Anolis_carolinensis
FBgn0027784	Prp18	98	51.327	ENSANAG00000037445	-	99	51.622	Aotus_nancymaae
FBgn0027784	Prp18	98	51.183	ENSACLG00000026296	prpf18	99	51.775	Astatotilapia_calliptera
FBgn0027784	Prp18	98	52.450	ENSAMXG00000012848	prpf18	99	52.450	Astyanax_mexicanus
FBgn0027784	Prp18	98	51.032	ENSBTAG00000017244	PRPF18	99	51.327	Bos_taurus
FBgn0027784	Prp18	98	35.465	WBGene00009320	F32B6.3	98	35.465	Caenorhabditis_elegans
FBgn0027784	Prp18	98	51.327	ENSCJAG00000009432	-	99	51.622	Callithrix_jacchus
FBgn0027784	Prp18	98	51.032	ENSCAFG00000004735	-	99	51.327	Canis_familiaris
FBgn0027784	Prp18	98	51.032	ENSCAFG00020007712	-	99	51.327	Canis_lupus_dingo
FBgn0027784	Prp18	98	51.032	ENSCHIG00000000499	-	99	51.327	Capra_hircus
FBgn0027784	Prp18	98	51.327	ENSTSYG00000003517	-	99	51.622	Carlito_syrichta
FBgn0027784	Prp18	98	51.327	ENSCPOG00000021069	-	99	51.622	Cavia_porcellus
FBgn0027784	Prp18	98	51.327	ENSCCAG00000036822	-	99	51.622	Cebus_capucinus
FBgn0027784	Prp18	98	44.776	ENSCATG00000016633	-	99	45.210	Cercocebus_atys
FBgn0027784	Prp18	98	50.737	ENSCLAG00000011770	-	99	51.032	Chinchilla_lanigera
FBgn0027784	Prp18	98	49.713	ENSCSAG00000013109	-	99	49.713	Chlorocebus_sabaeus
FBgn0027784	Prp18	98	49.292	ENSCPBG00000003100	-	99	50.142	Chrysemys_picta_bellii
FBgn0027784	Prp18	97	47.929	ENSCING00000020481	-	97	47.929	Ciona_intestinalis
FBgn0027784	Prp18	99	47.647	ENSCSAVG00000010546	-	99	47.647	Ciona_savignyi
FBgn0027784	Prp18	98	51.327	ENSCANG00000034900	-	99	51.622	Colobus_angolensis_palliatus
FBgn0027784	Prp18	98	51.032	ENSCGRG00001023665	Prpf18	99	51.327	Cricetulus_griseus_chok1gshd
FBgn0027784	Prp18	98	51.032	ENSCGRG00000014690	Prpf18	99	51.327	Cricetulus_griseus_crigri
FBgn0027784	Prp18	98	51.479	ENSCSEG00000005536	prpf18	99	51.479	Cynoglossus_semilaevis
FBgn0027784	Prp18	98	52.959	ENSCVAG00000012401	prpf18	99	52.959	Cyprinodon_variegatus
FBgn0027784	Prp18	98	51.917	ENSDARG00000058306	prpf18	99	52.212	Danio_rerio
FBgn0027784	Prp18	98	51.327	ENSDNOG00000035607	-	99	51.622	Dasypus_novemcinctus
FBgn0027784	Prp18	98	51.032	ENSDORG00000000858	Prpf18	99	51.327	Dipodomys_ordii
FBgn0027784	Prp18	98	44.543	ENSETEG00000015060	-	99	44.543	Echinops_telfairi
FBgn0027784	Prp18	98	48.688	ENSEBUG00000016502	prpf18	98	48.688	Eptatretus_burgeri
FBgn0027784	Prp18	98	51.327	ENSEASG00005019373	-	99	51.622	Equus_asinus_asinus
FBgn0027784	Prp18	98	51.327	ENSECAG00000006997	PRPF18	99	51.622	Equus_caballus
FBgn0027784	Prp18	72	92.308	ENSEEUG00000001171	-	79	92.308	Erinaceus_europaeus
FBgn0027784	Prp18	98	53.235	ENSELUG00000022190	prpf18	99	53.235	Esox_lucius
FBgn0027784	Prp18	98	51.032	ENSFCAG00000004436	-	99	51.327	Felis_catus
FBgn0027784	Prp18	91	47.385	ENSFALG00000001912	-	97	47.385	Ficedula_albicollis
FBgn0027784	Prp18	64	44.240	ENSFDAG00000010713	-	66	44.240	Fukomys_damarensis
FBgn0027784	Prp18	91	50.473	ENSFDAG00000014026	-	99	50.789	Fukomys_damarensis
FBgn0027784	Prp18	76	54.789	ENSFHEG00000020125	prpf18	96	54.789	Fundulus_heteroclitus
FBgn0027784	Prp18	98	51.642	ENSGMOG00000012210	prpf18	99	51.642	Gadus_morhua
FBgn0027784	Prp18	98	51.327	ENSGALG00000043593	-	99	51.327	Gallus_gallus
FBgn0027784	Prp18	98	51.775	ENSGAFG00000006034	prpf18	99	51.775	Gambusia_affinis
FBgn0027784	Prp18	98	50.592	ENSGACG00000012232	prpf18	99	50.592	Gasterosteus_aculeatus
FBgn0027784	Prp18	98	51.327	ENSGAGG00000016878	-	99	51.327	Gopherus_agassizii
FBgn0027784	Prp18	91	48.734	ENSGGOG00000025188	-	96	49.051	Gorilla_gorilla
FBgn0027784	Prp18	98	51.183	ENSHBUG00000010264	prpf18	99	51.775	Haplochromis_burtoni
FBgn0027784	Prp18	98	51.032	ENSHGLG00000018534	PRPF18	99	51.327	Heterocephalus_glaber_female
FBgn0027784	Prp18	91	50.473	ENSHGLG00100012161	-	97	50.789	Heterocephalus_glaber_male
FBgn0027784	Prp18	98	52.096	ENSHCOG00000015987	prpf18	99	52.994	Hippocampus_comes
FBgn0027784	Prp18	98	50.286	ENSIPUG00000007432	prpf18	99	50.857	Ictalurus_punctatus
FBgn0027784	Prp18	98	51.622	ENSSTOG00000008735	-	99	51.917	Ictidomys_tridecemlineatus
FBgn0027784	Prp18	98	51.327	ENSJJAG00000024041	-	99	51.622	Jaculus_jaculus
FBgn0027784	Prp18	98	36.795	ENSJJAG00000015191	-	99	37.389	Jaculus_jaculus
FBgn0027784	Prp18	98	51.775	ENSKMAG00000012124	prpf18	99	51.775	Kryptolebias_marmoratus
FBgn0027784	Prp18	96	48.949	ENSLBEG00000028466	prpf18	99	48.949	Labrus_bergylta
FBgn0027784	Prp18	98	51.622	ENSLACG00000009885	prpf18	99	51.917	Latimeria_chalumnae
FBgn0027784	Prp18	98	51.917	ENSLOCG00000016736	prpf18	99	51.917	Lepisosteus_oculatus
FBgn0027784	Prp18	98	51.327	ENSLAFG00000007753	-	99	51.622	Loxodonta_africana
FBgn0027784	Prp18	98	51.327	ENSMFAG00000000540	-	99	51.622	Macaca_fascicularis
FBgn0027784	Prp18	98	51.327	ENSMMUG00000015071	PRPF18	96	63.057	Macaca_mulatta
FBgn0027784	Prp18	98	51.327	ENSMNEG00000024679	-	99	51.622	Macaca_nemestrina
FBgn0027784	Prp18	98	37.168	ENSMLEG00000031715	-	99	37.758	Mandrillus_leucophaeus
FBgn0027784	Prp18	98	52.367	ENSMAMG00000006610	prpf18	99	52.367	Mastacembelus_armatus
FBgn0027784	Prp18	98	51.183	ENSMZEG00005019392	prpf18	99	51.775	Maylandia_zebra
FBgn0027784	Prp18	98	51.327	ENSMGAG00000005023	-	99	51.327	Meleagris_gallopavo
FBgn0027784	Prp18	98	51.622	ENSMICG00000006572	-	99	51.917	Microcebus_murinus
FBgn0027784	Prp18	98	51.327	ENSMOCG00000021468	Prpf18	99	51.622	Microtus_ochrogaster
FBgn0027784	Prp18	98	51.775	ENSMMOG00000013012	prpf18	99	52.663	Mola_mola
FBgn0027784	Prp18	98	49.558	ENSMODG00000024043	-	99	49.558	Monodelphis_domestica
FBgn0027784	Prp18	91	47.077	ENSMODG00000016902	-	91	47.077	Monodelphis_domestica
FBgn0027784	Prp18	98	46.974	ENSMALG00000005486	prpf18	99	48.276	Monopterus_albus
FBgn0027784	Prp18	98	51.032	MGP_CAROLIEiJ_G0023143	Prpf18	99	51.032	Mus_caroli
FBgn0027784	Prp18	98	51.032	ENSMUSG00000039449	Prpf18	99	51.032	Mus_musculus
FBgn0027784	Prp18	98	51.327	MGP_PahariEiJ_G0019203	Prpf18	99	51.622	Mus_pahari
FBgn0027784	Prp18	98	51.032	MGP_SPRETEiJ_G0024061	Prpf18	99	51.032	Mus_spretus
FBgn0027784	Prp18	98	50.737	ENSMPUG00000000938	-	99	51.032	Mustela_putorius_furo
FBgn0027784	Prp18	98	51.032	ENSMLUG00000009200	-	99	51.032	Myotis_lucifugus
FBgn0027784	Prp18	98	51.622	ENSNGAG00000012500	-	99	51.917	Nannospalax_galili
FBgn0027784	Prp18	66	49.339	ENSNGAG00000023550	-	81	49.339	Nannospalax_galili
FBgn0027784	Prp18	98	51.183	ENSNBRG00000001778	prpf18	99	51.775	Neolamprologus_brichardi
FBgn0027784	Prp18	98	51.327	ENSNLEG00000012186	-	99	51.622	Nomascus_leucogenys
FBgn0027784	Prp18	75	43.922	ENSMEUG00000005032	-	74	43.922	Notamacropus_eugenii
FBgn0027784	Prp18	76	30.189	ENSOPRG00000002153	-	100	30.566	Ochotona_princeps
FBgn0027784	Prp18	98	50.737	ENSODEG00000003770	-	99	51.032	Octodon_degus
FBgn0027784	Prp18	97	50.299	ENSONIG00000014854	prpf18	96	50.898	Oreochromis_niloticus
FBgn0027784	Prp18	98	50.442	ENSOANG00000015404	-	99	50.442	Ornithorhynchus_anatinus
FBgn0027784	Prp18	98	51.032	ENSOCUG00000027756	-	94	50.625	Oryctolagus_cuniculus
FBgn0027784	Prp18	98	50.720	ENSORLG00000010293	prpf18	99	50.720	Oryzias_latipes
FBgn0027784	Prp18	98	51.183	ENSORLG00020001530	prpf18	99	51.183	Oryzias_latipes_hni
FBgn0027784	Prp18	98	50.888	ENSORLG00015013705	prpf18	99	50.888	Oryzias_latipes_hsok
FBgn0027784	Prp18	98	52.071	ENSOMEG00000009167	prpf18	99	52.071	Oryzias_melastigma
FBgn0027784	Prp18	98	50.442	ENSOGAG00000007294	-	99	50.737	Otolemur_garnettii
FBgn0027784	Prp18	98	49.425	ENSOARG00000006243	-	99	49.852	Ovis_aries
FBgn0027784	Prp18	98	51.327	ENSPPAG00000041959	-	99	51.622	Pan_paniscus
FBgn0027784	Prp18	98	51.032	ENSPPRG00000000107	-	99	51.327	Panthera_pardus
FBgn0027784	Prp18	98	51.032	ENSPTIG00000021094	-	99	51.327	Panthera_tigris_altaica
FBgn0027784	Prp18	98	51.327	ENSPTRG00000002306	PRPF18	99	51.622	Pan_troglodytes
FBgn0027784	Prp18	98	51.327	ENSPANG00000023346	-	99	51.622	Papio_anubis
FBgn0027784	Prp18	84	92.308	ENSPKIG00000014128	prpf18	69	92.308	Paramormyrops_kingsleyae
FBgn0027784	Prp18	98	51.032	ENSPSIG00000016064	-	99	51.032	Pelodiscus_sinensis
FBgn0027784	Prp18	98	50.442	ENSPMGG00000016486	prpf18	99	50.592	Periophthalmus_magnuspinnatus
FBgn0027784	Prp18	98	51.032	ENSPEMG00000013704	Prpf18	99	51.032	Peromyscus_maniculatus_bairdii
FBgn0027784	Prp18	98	50.585	ENSPMAG00000000204	prpf18	99	50.585	Petromyzon_marinus
FBgn0027784	Prp18	91	48.418	ENSPCIG00000012963	-	99	48.734	Phascolarctos_cinereus
FBgn0027784	Prp18	98	52.161	ENSPFOG00000017611	prpf18	99	51.873	Poecilia_formosa
FBgn0027784	Prp18	98	53.254	ENSPLAG00000000369	prpf18	99	53.254	Poecilia_latipinna
FBgn0027784	Prp18	98	53.254	ENSPMEG00000005183	prpf18	99	53.254	Poecilia_mexicana
FBgn0027784	Prp18	98	52.663	ENSPREG00000015232	prpf18	99	52.663	Poecilia_reticulata
FBgn0027784	Prp18	98	51.327	ENSPPYG00000002101	PRPF18	99	51.622	Pongo_abelii
FBgn0027784	Prp18	98	37.168	ENSPCAG00000010833	-	99	37.463	Procavia_capensis
FBgn0027784	Prp18	98	48.503	ENSPCOG00000013057	-	99	49.401	Propithecus_coquereli
FBgn0027784	Prp18	98	50.888	ENSPNYG00000003554	prpf18	99	51.479	Pundamilia_nyererei
FBgn0027784	Prp18	98	51.437	ENSPNAG00000023151	prpf18	99	51.437	Pygocentrus_nattereri
FBgn0027784	Prp18	98	50.737	ENSRNOG00000018396	Prpf18	99	51.032	Rattus_norvegicus
FBgn0027784	Prp18	98	51.622	ENSRBIG00000028028	-	99	51.917	Rhinopithecus_bieti
FBgn0027784	Prp18	98	51.327	ENSRROG00000040695	-	99	51.622	Rhinopithecus_roxellana
FBgn0027784	Prp18	98	51.327	ENSSBOG00000034482	-	99	51.622	Saimiri_boliviensis_boliviensis
FBgn0027784	Prp18	98	46.921	ENSSHAG00000009669	-	99	46.921	Sarcophilus_harrisii
FBgn0027784	Prp18	98	50.737	ENSSHAG00000016463	-	99	51.032	Sarcophilus_harrisii
FBgn0027784	Prp18	97	50.289	ENSSFOG00015022118	prpf18	99	48.397	Scleropages_formosus
FBgn0027784	Prp18	98	51.183	ENSSMAG00000005308	prpf18	99	51.183	Scophthalmus_maximus
FBgn0027784	Prp18	98	51.775	ENSSDUG00000015428	prpf18	99	52.663	Seriola_dumerili
FBgn0027784	Prp18	98	51.775	ENSSLDG00000023989	prpf18	99	52.663	Seriola_lalandi_dorsalis
FBgn0027784	Prp18	98	32.743	ENSSARG00000005307	-	99	33.038	Sorex_araneus
FBgn0027784	Prp18	98	50.147	ENSSPUG00000002619	-	99	50.147	Sphenodon_punctatus
FBgn0027784	Prp18	98	51.775	ENSSPAG00000019502	prpf18	99	52.663	Stegastes_partitus
FBgn0027784	Prp18	98	51.032	ENSSSCG00000026354	-	99	51.327	Sus_scrofa
FBgn0027784	Prp18	98	51.327	ENSTGUG00000002286	-	99	51.327	Taeniopygia_guttata
FBgn0027784	Prp18	98	51.775	ENSTRUG00000011278	prpf18	99	51.775	Takifugu_rubripes
FBgn0027784	Prp18	98	51.183	ENSTNIG00000000911	prpf18	99	51.183	Tetraodon_nigroviridis
FBgn0027784	Prp18	77	90.667	ENSTBEG00000013011	-	78	90.667	Tupaia_belangeri
FBgn0027784	Prp18	98	51.032	ENSTTRG00000011117	PRPF18	99	51.032	Tursiops_truncatus
FBgn0027784	Prp18	76	55.556	ENSUAMG00000001815	-	78	55.556	Ursus_americanus
FBgn0027784	Prp18	98	48.968	ENSUMAG00000012329	-	99	49.263	Ursus_maritimus
FBgn0027784	Prp18	98	46.313	ENSVPAG00000011486	-	99	46.608	Vicugna_pacos
FBgn0027784	Prp18	98	51.032	ENSVVUG00000005453	-	99	51.327	Vulpes_vulpes
FBgn0027784	Prp18	98	50.877	ENSXETG00000024057	prpf18	99	50.877	Xenopus_tropicalis
FBgn0027784	Prp18	98	52.059	ENSXCOG00000020414	prpf18	99	52.059	Xiphophorus_couchianus
FBgn0027784	Prp18	98	52.367	ENSXMAG00000004713	prpf18	90	52.367	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000350	generation of catalytic spliceosome for second transesterification step	21873635.	IBA	Process
GO:0000386	second spliceosomal transesterification activity	21873635.	IBA	Function
GO:0000398	mRNA splicing, via spliceosome	10908584.	ISS	Process
GO:0005681	spliceosomal complex	10908584.	ISS	Component
GO:0005682	U5 snRNP	21873635.	IBA	Component
GO:0046540	U4/U6 x U5 tri-snRNP complex	21873635.	IBA	Component
GO:0071021	U2-type post-spliceosomal complex	21873635.	IBA	Component
GO:0071048	nuclear retention of unspliced pre-mRNA at the site of transcription	21873635.	IBA	Process