EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0027835 (Gene tree)
Gene ID: 37116
Gene Symbol: Dp1
Alias: -
Full Name: Dodeca-satellite-binding protein 1
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: confidence
Strand: Plus strand
Length: 9098 bases
Position: chr2R:18412027-18421124
Accession: FBgn0027835
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0085860	KH_1	PF00013.29	3.2e-172	1	13
FBpp0085860	KH_1	PF00013.29	3.2e-172	2	13
FBpp0085860	KH_1	PF00013.29	3.2e-172	3	13
FBpp0085860	KH_1	PF00013.29	3.2e-172	4	13
FBpp0085860	KH_1	PF00013.29	3.2e-172	5	13
FBpp0085860	KH_1	PF00013.29	3.2e-172	6	13
FBpp0085860	KH_1	PF00013.29	3.2e-172	7	13
FBpp0085860	KH_1	PF00013.29	3.2e-172	8	13
FBpp0085860	KH_1	PF00013.29	3.2e-172	9	13
FBpp0085860	KH_1	PF00013.29	3.2e-172	10	13
FBpp0085860	KH_1	PF00013.29	3.2e-172	11	13
FBpp0085860	KH_1	PF00013.29	3.2e-172	12	13
FBpp0085860	KH_1	PF00013.29	3.2e-172	13	13
FBpp0085861	KH_1	PF00013.29	3.2e-172	1	13
FBpp0085861	KH_1	PF00013.29	3.2e-172	2	13
FBpp0085861	KH_1	PF00013.29	3.2e-172	3	13
FBpp0085861	KH_1	PF00013.29	3.2e-172	4	13
FBpp0085861	KH_1	PF00013.29	3.2e-172	5	13
FBpp0085861	KH_1	PF00013.29	3.2e-172	6	13
FBpp0085861	KH_1	PF00013.29	3.2e-172	7	13
FBpp0085861	KH_1	PF00013.29	3.2e-172	8	13
FBpp0085861	KH_1	PF00013.29	3.2e-172	9	13
FBpp0085861	KH_1	PF00013.29	3.2e-172	10	13
FBpp0085861	KH_1	PF00013.29	3.2e-172	11	13
FBpp0085861	KH_1	PF00013.29	3.2e-172	12	13
FBpp0085861	KH_1	PF00013.29	3.2e-172	13	13
FBpp0085862	KH_1	PF00013.29	3.2e-172	1	13
FBpp0085862	KH_1	PF00013.29	3.2e-172	2	13
FBpp0085862	KH_1	PF00013.29	3.2e-172	3	13
FBpp0085862	KH_1	PF00013.29	3.2e-172	4	13
FBpp0085862	KH_1	PF00013.29	3.2e-172	5	13
FBpp0085862	KH_1	PF00013.29	3.2e-172	6	13
FBpp0085862	KH_1	PF00013.29	3.2e-172	7	13
FBpp0085862	KH_1	PF00013.29	3.2e-172	8	13
FBpp0085862	KH_1	PF00013.29	3.2e-172	9	13
FBpp0085862	KH_1	PF00013.29	3.2e-172	10	13
FBpp0085862	KH_1	PF00013.29	3.2e-172	11	13
FBpp0085862	KH_1	PF00013.29	3.2e-172	12	13
FBpp0085862	KH_1	PF00013.29	3.2e-172	13	13
FBpp0089201	KH_1	PF00013.29	3.2e-172	1	13
FBpp0089201	KH_1	PF00013.29	3.2e-172	2	13
FBpp0089201	KH_1	PF00013.29	3.2e-172	3	13
FBpp0089201	KH_1	PF00013.29	3.2e-172	4	13
FBpp0089201	KH_1	PF00013.29	3.2e-172	5	13
FBpp0089201	KH_1	PF00013.29	3.2e-172	6	13
FBpp0089201	KH_1	PF00013.29	3.2e-172	7	13
FBpp0089201	KH_1	PF00013.29	3.2e-172	8	13
FBpp0089201	KH_1	PF00013.29	3.2e-172	9	13
FBpp0089201	KH_1	PF00013.29	3.2e-172	10	13
FBpp0089201	KH_1	PF00013.29	3.2e-172	11	13
FBpp0089201	KH_1	PF00013.29	3.2e-172	12	13
FBpp0089201	KH_1	PF00013.29	3.2e-172	13	13
FBpp0089202	KH_1	PF00013.29	3.2e-172	1	13
FBpp0089202	KH_1	PF00013.29	3.2e-172	2	13
FBpp0089202	KH_1	PF00013.29	3.2e-172	3	13
FBpp0089202	KH_1	PF00013.29	3.2e-172	4	13
FBpp0089202	KH_1	PF00013.29	3.2e-172	5	13
FBpp0089202	KH_1	PF00013.29	3.2e-172	6	13
FBpp0089202	KH_1	PF00013.29	3.2e-172	7	13
FBpp0089202	KH_1	PF00013.29	3.2e-172	8	13
FBpp0089202	KH_1	PF00013.29	3.2e-172	9	13
FBpp0089202	KH_1	PF00013.29	3.2e-172	10	13
FBpp0089202	KH_1	PF00013.29	3.2e-172	11	13
FBpp0089202	KH_1	PF00013.29	3.2e-172	12	13
FBpp0089202	KH_1	PF00013.29	3.2e-172	13	13
FBpp0309290	KH_1	PF00013.29	3.2e-172	1	13
FBpp0309290	KH_1	PF00013.29	3.2e-172	2	13
FBpp0309290	KH_1	PF00013.29	3.2e-172	3	13
FBpp0309290	KH_1	PF00013.29	3.2e-172	4	13
FBpp0309290	KH_1	PF00013.29	3.2e-172	5	13
FBpp0309290	KH_1	PF00013.29	3.2e-172	6	13
FBpp0309290	KH_1	PF00013.29	3.2e-172	7	13
FBpp0309290	KH_1	PF00013.29	3.2e-172	8	13
FBpp0309290	KH_1	PF00013.29	3.2e-172	9	13
FBpp0309290	KH_1	PF00013.29	3.2e-172	10	13
FBpp0309290	KH_1	PF00013.29	3.2e-172	11	13
FBpp0309290	KH_1	PF00013.29	3.2e-172	12	13
FBpp0309290	KH_1	PF00013.29	3.2e-172	13	13
FBpp0311418	KH_1	PF00013.29	3.2e-172	1	13
FBpp0311418	KH_1	PF00013.29	3.2e-172	2	13
FBpp0311418	KH_1	PF00013.29	3.2e-172	3	13
FBpp0311418	KH_1	PF00013.29	3.2e-172	4	13
FBpp0311418	KH_1	PF00013.29	3.2e-172	5	13
FBpp0311418	KH_1	PF00013.29	3.2e-172	6	13
FBpp0311418	KH_1	PF00013.29	3.2e-172	7	13
FBpp0311418	KH_1	PF00013.29	3.2e-172	8	13
FBpp0311418	KH_1	PF00013.29	3.2e-172	9	13
FBpp0311418	KH_1	PF00013.29	3.2e-172	10	13
FBpp0311418	KH_1	PF00013.29	3.2e-172	11	13
FBpp0311418	KH_1	PF00013.29	3.2e-172	12	13
FBpp0311418	KH_1	PF00013.29	3.2e-172	13	13

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27378189	Global changes of the RNA bound proteome during the maternal-to-zygotic transition in Drosophila	IC & embryos.MZT	2016 Jul 5	Sysoev VO	DOI: 10.1038/ncomms12128
27197210	The mRNA-bound proteome of the early fly embryo	IC & embryos	2016 Apr 28	Wessels HH	DOI: 10.1101/gr.200386.115

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0340329	-	5456	-	FBpp0309290	1301 (aa)	-	Q7KN75
FBtr0345226	-	5811	-	FBpp0311418	1301 (aa)	-	Q7KN75
FBtr0086679	-	5680	-	FBpp0085860	1301 (aa)	-	Q7KN75
FBtr0086681	-	5453	-	FBpp0085862	1301 (aa)	-	Q7KN75
FBtr0086680	-	5608	-	FBpp0085861	1301 (aa)	-	Q7KN75
FBtr0086683	-	5762	-	FBpp0089202	1301 (aa)	-	Q7KN75
FBtr0086682	-	5377	-	FBpp0089201	1301 (aa)	-	Q7KN75

Gene Model

Click here to download FBgn0027835's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0027835's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0027835	Dp1	90	36.864	WBGene00007463	vgln-1	98	35.543	Caenorhabditis_elegans
FBgn0027835	Dp1	97	41.274	ENSCING00000004580	-	98	41.587	Ciona_intestinalis
FBgn0027835	Dp1	92	43.503	ENSCSAVG00000009989	-	99	42.951	Ciona_savignyi

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000792	heterochromatin	10393197.	IDA	Component
GO:0003696	satellite DNA binding	10805729.	IDA	Function
GO:0003697	single-stranded DNA binding	10393197.10805729.	IDA	Function
GO:0003697	single-stranded DNA binding	15380087.	TAS	Function
GO:0003730	mRNA 3'-UTR binding	17890223.	IDA	Function
GO:0005634	nucleus	10393197.	IDA	Component
GO:0005701	polytene chromosome chromocenter	10393197.	IDA	Component
GO:0007059	chromosome segregation	15380062.	IMP	Process
GO:0030261	chromosome condensation	15380062.	IMP	Process
GO:0031507	heterochromatin assembly	15723802.	IDA	Process
GO:0045727	positive regulation of translation	17890223.	IDA	Process
GO:1990904	ribonucleoprotein complex	17890223.	IDA	Component