EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0027841 (Gene tree)
Gene ID: 42239
Gene Symbol: CstF64
Alias: -
Full Name: Cleavage stimulation factor 64 kD subunit
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: confidence
Strand: Plus strand
Length: 1509 bases
Position: chr3R:18659618-18661126
Accession: FBgn0027841
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0083075	RRM_1	PF00076.22	1.4e-24	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27378189	Global changes of the RNA bound proteome during the maternal-to-zygotic transition in Drosophila	IC & embryos.MZT	2016 Jul 5	Sysoev VO	DOI: 10.1038/ncomms12128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0083660	-	1446	-	FBpp0083075	419 (aa)	-	A8E6L0

Gene Model

Click here to download FBgn0027841's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0027841's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0027841	CstF64	50	52.074	WBGene00000774	cpf-2	54	54.839	Caenorhabditis_elegans
FBgn0027841	CstF64	55	66.667	ENSCSAVG00000010770	-	51	65.803	Ciona_savignyi

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	21873635.	IBA	Function
GO:0003729	mRNA binding	21873635.	IBA	Function
GO:0003729	mRNA binding	10908586.	ISS	Function
GO:0005847	mRNA cleavage and polyadenylation specificity factor complex	21873635.	IBA	Component
GO:0005848	mRNA cleavage stimulating factor complex	19450530.	IDA	Component
GO:0006378	mRNA polyadenylation	-	IEA	Process
GO:0010508	positive regulation of autophagy	29606597.	IGI	Process
GO:0098789	pre-mRNA cleavage required for polyadenylation	21873635.	IBA	Process