EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
FBgn0028577 (Gene tree)
Gene ID
38173
Gene Symbol
hfp
Alias
-
Full Name
half pint
Gene Type
protein_coding
Species
Drosophila_melanogaster
Status
putative
Strand
Minus strand
Length
5738 bases
Position
chr3L:1496853-1502590
Accession
FBgn0028577
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
FBpp0072591RRM_1PF00076.221.6e-4012
FBpp0072591RRM_1PF00076.221.6e-4022
FBpp0072592RRM_1PF00076.221.6e-4012
FBpp0072592RRM_1PF00076.221.6e-4022
FBpp0072594RRM_1PF00076.221.6e-4012
FBpp0072594RRM_1PF00076.221.6e-4022
FBpp0289645RRM_1PF00076.221.6e-4012
FBpp0289645RRM_1PF00076.221.6e-4022
FBpp0289646RRM_1PF00076.221.6e-4012
FBpp0289646RRM_1PF00076.221.6e-4022
FBpp0289647RRM_1PF00076.221.6e-4012
FBpp0289647RRM_1PF00076.221.6e-4022
FBpp0289648RRM_1PF00076.221.6e-4012
FBpp0289648RRM_1PF00076.221.6e-4022
FBpp0289649RRM_1PF00076.221.6e-4012
FBpp0289649RRM_1PF00076.221.6e-4022
FBpp0290738RRM_1PF00076.221.6e-4012
FBpp0290738RRM_1PF00076.221.6e-4022
FBpp0072593RRM_1PF00076.223.4e-4012
FBpp0072593RRM_1PF00076.223.4e-4022
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
FBtr0300420-3081-FBpp0289649545 (aa)-A4V193
FBtr0300418-2776-FBpp0289647545 (aa)-A4V193
FBtr0300417-2442-FBpp0289646545 (aa)-A4V193
FBtr0300416-4856-FBpp0289645545 (aa)-A4V193
FBtr0072710-2503-FBpp0072594545 (aa)-Q8T6B9
FBtr0301523-2447-FBpp0290738545 (aa)-A4V193
FBtr0072707-2456-FBpp0072591545 (aa)-A4V193
FBtr0300419-4455-FBpp0289648545 (aa)-A4V193
FBtr0072709-2395-FBpp0072593637 (aa)-Q8T6B9
FBtr0072708-2703-FBpp0072592545 (aa)-A4V193
Gene Model
Click here to download FBgn0028577's gene model file
Protein-Protein Interaction (PPI)

Clik here to download FBgn0028577's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
FBgn0028577hfp5134.375FBgn0005411U2af508334.375
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
FBgn0028577hfp9949.644ENSG00000179950PUF608168.321Homo_sapiens
FBgn0028577hfp9951.103ENSAPOG00000001713puf60b7968.235Acanthochromis_polyacanthus
FBgn0028577hfp9944.563ENSAMEG00000006406PUF609048.021Ailuropoda_melanoleuca
FBgn0028577hfp9948.754ENSACIG00000021705puf60b8563.103Amphilophus_citrinellus
FBgn0028577hfp9942.096ENSACIG00000003263-9746.127Amphilophus_citrinellus
FBgn0028577hfp9951.103ENSAOCG00000005395puf60b8267.033Amphiprion_ocellaris
FBgn0028577hfp9944.742ENSAOCG00000015558-8464.706Amphiprion_ocellaris
FBgn0028577hfp9949.265ENSAPEG00000011923puf60b8263.370Amphiprion_percula
FBgn0028577hfp7559.317ENSAPEG00000001836-7469.732Amphiprion_percula
FBgn0028577hfp9948.850ENSATEG00000001730puf60b9549.050Anabas_testudineus
FBgn0028577hfp9949.288ENSATEG00000006303-8563.668Anabas_testudineus
FBgn0028577hfp9949.733ENSANAG00000018626PUF609551.150Aotus_nancymaae
FBgn0028577hfp9950.092ENSACLG00000004462puf60b8466.667Astatotilapia_calliptera
FBgn0028577hfp8059.306ENSAMXG00000036570puf60a6058.485Astyanax_mexicanus
FBgn0028577hfp7758.805ENSAMXG00000041030puf60b7963.051Astyanax_mexicanus
FBgn0028577hfp8658.580ENSBTAG00000037493PUF609648.969Bos_taurus
FBgn0028577hfp7552.347WBGene00004389rnp-69551.534Caenorhabditis_elegans
FBgn0028577hfp9949.554ENSCJAG00000021485PUF609548.969Callithrix_jacchus
FBgn0028577hfp9946.346ENSCAFG00000001400PUF609050.973Canis_familiaris
FBgn0028577hfp9945.989ENSCAFG00020018754PUF609548.969Canis_lupus_dingo
FBgn0028577hfp9946.346ENSCHIG00000001618PUF608449.742Capra_hircus
FBgn0028577hfp9946.751ENSTSYG00000011912PUF609748.969Carlito_syrichta
FBgn0028577hfp9947.993ENSCPOG00000014613PUF607865.704Cavia_porcellus
FBgn0028577hfp9947.426ENSCCAG00000007744PUF609549.141Cebus_capucinus
FBgn0028577hfp9949.644ENSCATG00000035405PUF609548.797Cercocebus_atys
FBgn0028577hfp8658.580ENSCLAG00000009154PUF608950.973Chinchilla_lanigera
FBgn0028577hfp9946.263ENSCSAG00000008878PUF609748.797Chlorocebus_sabaeus
FBgn0028577hfp9950.534ENSCPBG00000005595PUF609549.313Chrysemys_picta_bellii
FBgn0028577hfp5752.215ENSCING00000002156-7458.519Ciona_intestinalis
FBgn0028577hfp10055.020ENSCING00000008436-8054.682Ciona_intestinalis
FBgn0028577hfp10042.755ENSCSAVG00000001385-9253.030Ciona_savignyi
FBgn0028577hfp6459.447ENSCSAVG00000004765-8057.872Ciona_savignyi
FBgn0028577hfp6158.683ENSCANG00000041843PUF607063.103Colobus_angolensis_palliatus
FBgn0028577hfp9949.466ENSCGRG00001017442Puf608951.064Cricetulus_griseus_chok1gshd
FBgn0028577hfp9946.346ENSCGRG00000003717Puf608949.742Cricetulus_griseus_crigri
FBgn0028577hfp9944.771ENSCSEG00000014845-5162.105Cynoglossus_semilaevis
FBgn0028577hfp9950.089ENSCSEG00000019887puf60b8949.741Cynoglossus_semilaevis
FBgn0028577hfp9646.449ENSCVAG00000001560-8763.889Cyprinodon_variegatus
FBgn0028577hfp9948.624ENSDARG00000001241puf60b9467.373Danio_rerio
FBgn0028577hfp8657.664ENSDARG00000032175puf60a9463.964Danio_rerio
FBgn0028577hfp9644.253ENSDNOG00000043278PUF606655.102Dasypus_novemcinctus
FBgn0028577hfp9951.009ENSDORG00000004585Puf609151.064Dipodomys_ordii
FBgn0028577hfp10048.352ENSEBUG00000005470-7963.177Eptatretus_burgeri
FBgn0028577hfp9946.346ENSEASG00005009695PUF609548.969Equus_asinus_asinus
FBgn0028577hfp9951.009ENSECAG00000024681PUF608162.034Equus_caballus
FBgn0028577hfp7263.971ENSELUG00000006507puf60b9749.066Esox_lucius
FBgn0028577hfp9948.168ENSELUG00000018443-9751.681Esox_lucius
FBgn0028577hfp9946.346ENSFCAG00000001045PUF609748.969Felis_catus
FBgn0028577hfp9942.527ENSFALG00000001136PUF608654.110Ficedula_albicollis
FBgn0028577hfp8658.580ENSFDAG00000017177PUF608950.796Fukomys_damarensis
FBgn0028577hfp7267.843ENSFHEG00000020046puf60b8466.667Fundulus_heteroclitus
FBgn0028577hfp9940.801ENSGMOG00000006392puf60b8955.263Gadus_morhua
FBgn0028577hfp5161.092ENSGALG00000039901PUF608559.486Gallus_gallus
FBgn0028577hfp8161.513ENSGAFG00000004334-9461.311Gambusia_affinis
FBgn0028577hfp7263.971ENSGAFG00000021040puf60b8563.103Gambusia_affinis
FBgn0028577hfp9944.345ENSGACG00000001484-8157.639Gasterosteus_aculeatus
FBgn0028577hfp9951.927ENSGAGG00000013289PUF608851.418Gopherus_agassizii
FBgn0028577hfp9949.644ENSGGOG00000004646PUF609548.797Gorilla_gorilla
FBgn0028577hfp9948.168ENSHBUG00000009634-8467.399Haplochromis_burtoni
FBgn0028577hfp9950.092ENSHBUG00000015118puf60b8466.667Haplochromis_burtoni
FBgn0028577hfp8658.580ENSHGLG00000006111PUF608950.796Heterocephalus_glaber_female
FBgn0028577hfp8658.580ENSHGLG00100012362PUF608950.796Heterocephalus_glaber_male
FBgn0028577hfp7354.455ENSHCOG00000000378-7361.355Hippocampus_comes
FBgn0028577hfp9149.079ENSHCOG00000015541puf60b9749.220Hippocampus_comes
FBgn0028577hfp7960.000ENSIPUG00000002453puf60a8760.518Ictalurus_punctatus
FBgn0028577hfp9948.995ENSIPUG00000004660puf60b9749.291Ictalurus_punctatus
FBgn0028577hfp8658.462ENSSTOG00000025037PUF609049.742Ictidomys_tridecemlineatus
FBgn0028577hfp9949.466ENSJJAG00000001076Puf608951.064Jaculus_jaculus
FBgn0028577hfp7263.971ENSKMAG00000016745puf60b9749.050Kryptolebias_marmoratus
FBgn0028577hfp7848.122ENSLACG00000005456PUF609546.919Latimeria_chalumnae
FBgn0028577hfp9945.811ENSLAFG00000022929PUF609049.225Loxodonta_africana
FBgn0028577hfp9949.644ENSMFAG00000043373PUF609548.797Macaca_fascicularis
FBgn0028577hfp9949.644ENSMMUG00000013558PUF609548.797Macaca_mulatta
FBgn0028577hfp9949.644ENSMNEG00000031099PUF609548.797Macaca_nemestrina
FBgn0028577hfp9947.523ENSMLEG00000040009PUF609750.796Mandrillus_leucophaeus
FBgn0028577hfp9949.541ENSMAMG00000010394puf60b8066.300Mastacembelus_armatus
FBgn0028577hfp9950.446ENSMAMG00000019476-9549.914Mastacembelus_armatus
FBgn0028577hfp9950.092ENSMZEG00005018515puf60b8466.667Maylandia_zebra
FBgn0028577hfp9947.331ENSMZEG00005019425-8364.360Maylandia_zebra
FBgn0028577hfp9949.466ENSMGAG00000013070PUF608660.383Meleagris_gallopavo
FBgn0028577hfp9941.455ENSMAUG00000018549-8053.731Mesocricetus_auratus
FBgn0028577hfp5861.146ENSMAUG00000014267-7564.865Mesocricetus_auratus
FBgn0028577hfp8658.754ENSMICG00000012226PUF609648.969Microcebus_murinus
FBgn0028577hfp9949.466ENSMOCG00000018780Puf608951.064Microtus_ochrogaster
FBgn0028577hfp9950.267ENSMMOG00000004217puf60b8463.448Mola_mola
FBgn0028577hfp9445.117ENSMMOG00000018059-9263.347Mola_mola
FBgn0028577hfp8658.754ENSMODG00000009161PUF609051.064Monodelphis_domestica
FBgn0028577hfp9948.663ENSMALG00000000200-8461.938Monopterus_albus
FBgn0028577hfp9945.826ENSMALG00000006797puf60b7863.136Monopterus_albus
FBgn0028577hfp9951.193MGP_CAROLIEiJ_G0019910Puf608951.241Mus_caroli
FBgn0028577hfp9951.193ENSMUSG00000002524Puf608951.241Mus_musculus
FBgn0028577hfp9951.193MGP_PahariEiJ_G0019920Puf608951.241Mus_pahari
FBgn0028577hfp9951.193MGP_SPRETEiJ_G0020812Puf608951.241Mus_spretus
FBgn0028577hfp9946.168ENSMPUG00000008137PUF608949.570Mustela_putorius_furo
FBgn0028577hfp9946.239ENSMLUG00000013032-9549.293Myotis_lucifugus
FBgn0028577hfp9949.110ENSMLUG00000000238-7862.034Myotis_lucifugus
FBgn0028577hfp9951.009ENSNGAG00000000712Puf609749.656Nannospalax_galili
FBgn0028577hfp7152.861ENSNBRG00000013047puf60b6861.724Neolamprologus_brichardi
FBgn0028577hfp8058.485ENSNBRG00000017223-8364.360Neolamprologus_brichardi
FBgn0028577hfp9949.644ENSNLEG00000002156PUF609550.796Nomascus_leucogenys
FBgn0028577hfp5963.673ENSOPRG00000002147PUF607264.516Ochotona_princeps
FBgn0028577hfp5165.468ENSODEG00000014024-7464.865Octodon_degus
FBgn0028577hfp7748.462ENSODEG00000015513-8645.890Octodon_degus
FBgn0028577hfp9947.331ENSONIG00000014030-8364.360Oreochromis_niloticus
FBgn0028577hfp9948.754ENSONIG00000006247puf60b8363.103Oreochromis_niloticus
FBgn0028577hfp9765.464ENSOANG00000006962PUF607364.623Ornithorhynchus_anatinus
FBgn0028577hfp9950.551ENSORLG00000012279puf60b7967.843Oryzias_latipes
FBgn0028577hfp8360.000ENSORLG00000028655-9163.576Oryzias_latipes
FBgn0028577hfp8057.704ENSORLG00020018144-8859.748Oryzias_latipes_hni
FBgn0028577hfp9950.089ENSORLG00020007333puf609749.050Oryzias_latipes_hni
FBgn0028577hfp8058.359ENSORLG00015016833-8960.625Oryzias_latipes_hsok
FBgn0028577hfp9949.110ENSORLG00015007718puf60b9749.050Oryzias_latipes_hsok
FBgn0028577hfp9949.110ENSOMEG00000001643puf60b8666.667Oryzias_melastigma
FBgn0028577hfp7961.022ENSOMEG00000022185-8762.583Oryzias_melastigma
FBgn0028577hfp9946.346ENSOGAG00000006259PUF607862.034Otolemur_garnettii
FBgn0028577hfp9943.627ENSOARG00000016235PUF609548.616Ovis_aries
FBgn0028577hfp9949.644ENSPPAG00000029933PUF609548.797Pan_paniscus
FBgn0028577hfp9946.346ENSPPRG00000003257PUF609750.973Panthera_pardus
FBgn0028577hfp9948.925ENSPTIG00000009795PUF609549.135Panthera_tigris_altaica
FBgn0028577hfp9947.523ENSPTRG00000043963-9548.969Pan_troglodytes
FBgn0028577hfp9947.890ENSPTRG00000020670PUF609548.969Pan_troglodytes
FBgn0028577hfp9949.644ENSPANG00000021936PUF609548.797Papio_anubis
FBgn0028577hfp8657.771ENSPKIG00000004295puf60a9161.342Paramormyrops_kingsleyae
FBgn0028577hfp6258.580ENSPKIG00000012204puf60b9750.775Paramormyrops_kingsleyae
FBgn0028577hfp9947.237ENSPSIG00000004679PUF609548.797Pelodiscus_sinensis
FBgn0028577hfp9949.726ENSPMGG00000013444puf60b8466.304Periophthalmus_magnuspinnatus
FBgn0028577hfp9949.466ENSPEMG00000008820Puf608951.064Peromyscus_maniculatus_bairdii
FBgn0028577hfp9949.288ENSPCIG00000020270PUF609648.969Phascolarctos_cinereus
FBgn0028577hfp9646.552ENSPFOG00000011118-8960.063Poecilia_formosa
FBgn0028577hfp7267.843ENSPFOG00000019217puf60b8366.667Poecilia_formosa
FBgn0028577hfp7267.843ENSPLAG00000010754puf60b8466.667Poecilia_latipinna
FBgn0028577hfp9945.633ENSPLAG00000017025-8259.748Poecilia_latipinna
FBgn0028577hfp9645.977ENSPMEG00000009767-8260.063Poecilia_mexicana
FBgn0028577hfp7267.843ENSPMEG00000000838puf60b8466.667Poecilia_mexicana
FBgn0028577hfp7267.843ENSPREG00000005440puf60b8466.667Poecilia_reticulata
FBgn0028577hfp6155.301ENSPPYG00000018951-6662.284Pongo_abelii
FBgn0028577hfp6156.695ENSPCAG00000014837PUF607560.383Procavia_capensis
FBgn0028577hfp9950.642ENSPCOG00000027981PUF609649.654Propithecus_coquereli
FBgn0028577hfp5766.142ENSPVAG00000016167PUF605266.142Pteropus_vampyrus
FBgn0028577hfp9947.331ENSPNYG00000004273-8364.360Pundamilia_nyererei
FBgn0028577hfp9948.754ENSPNYG00000002556puf60b8563.103Pundamilia_nyererei
FBgn0028577hfp9949.541ENSPNAG00000019415puf60b8263.390Pygocentrus_nattereri
FBgn0028577hfp5660.252ENSPNAG00000019909puf60a5865.657Pygocentrus_nattereri
FBgn0028577hfp9951.193ENSRNOG00000009960Puf608951.241Rattus_norvegicus
FBgn0028577hfp9949.644ENSRBIG00000035274PUF609548.797Rhinopithecus_bieti
FBgn0028577hfp9949.644ENSRROG00000029360PUF609548.797Rhinopithecus_roxellana
FBgn0028577hfp9948.991ENSSBOG00000027089PUF609547.766Saimiri_boliviensis_boliviensis
FBgn0028577hfp9044.379ENSSHAG00000006668PUF607761.661Sarcophilus_harrisii
FBgn0028577hfp9949.174ENSSFOG00015019619puf60b8265.441Scleropages_formosus
FBgn0028577hfp9951.332ENSSFOG00015019371puf60a9849.562Scleropages_formosus
FBgn0028577hfp6062.857ENSSMAG00000016381puf60b7263.441Scophthalmus_maximus
FBgn0028577hfp9948.754ENSSDUG00000009935puf60b8667.033Seriola_dumerili
FBgn0028577hfp9949.556ENSSLDG00000007366-9749.485Seriola_lalandi_dorsalis
FBgn0028577hfp9949.110ENSSLDG00000024011puf60b8063.448Seriola_lalandi_dorsalis
FBgn0028577hfp5155.245ENSSPUG00000013518PUF608455.263Sphenodon_punctatus
FBgn0028577hfp9947.610ENSSSCG00000038800PUF609550.973Sus_scrofa
FBgn0028577hfp8358.462ENSTGUG00000012797-9649.400Taeniopygia_guttata
FBgn0028577hfp9951.282ENSTRUG00000005420puf60b9748.161Takifugu_rubripes
FBgn0028577hfp9948.991ENSTRUG00000008843-8664.835Takifugu_rubripes
FBgn0028577hfp9949.381ENSTNIG00000013675puf60b9649.315Tetraodon_nigroviridis
FBgn0028577hfp7859.494ENSTNIG00000003069-9260.692Tetraodon_nigroviridis
FBgn0028577hfp5457.878ENSTBEG00000002751-8265.447Tupaia_belangeri
FBgn0028577hfp7243.846ENSTBEG00000001899-8651.010Tupaia_belangeri
FBgn0028577hfp9945.196ENSTTRG00000017088PUF609748.193Tursiops_truncatus
FBgn0028577hfp9945.989ENSUAMG00000024917PUF609548.969Ursus_americanus
FBgn0028577hfp8060.396ENSUMAG00000000272PUF607460.396Ursus_maritimus
FBgn0028577hfp9950.642ENSVVUG00000022527PUF609748.969Vulpes_vulpes
FBgn0028577hfp9951.927ENSXETG00000012469puf609652.305Xenopus_tropicalis
FBgn0028577hfp7267.843ENSXCOG00000012355puf60b8466.667Xiphophorus_couchianus
FBgn0028577hfp7760.526ENSXMAG00000010507-8663.028Xiphophorus_maculatus
FBgn0028577hfp7267.843ENSXMAG00000001862puf60b8563.103Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000380alternative mRNA splicing, via spliceosome11879639.IMPProcess
GO:0000381regulation of alternative mRNA splicing, via spliceosome15492211.HMPProcess
GO:0000381regulation of alternative mRNA splicing, via spliceosome19218244.IMPProcess
GO:0000398mRNA splicing, via spliceosome18981222.ICProcess
GO:0000398mRNA splicing, via spliceosome11879639.IMPProcess
GO:0000398mRNA splicing, via spliceosome10908584.ISSProcess
GO:0001558regulation of cell growth20667914.IMPProcess
GO:0003729mRNA binding10908586.ISSFunction
GO:0005515protein binding19013444.IPIFunction
GO:0005634nucleus15492211.ICComponent
GO:0005634nucleus11879639.20667914.IDAComponent
GO:0006376mRNA splice site selection11879639.IMPProcess
GO:0007282cystoblast division11879639.IMPProcess
GO:0008266poly(U) RNA binding10908584.ISSFunction
GO:0008285negative regulation of cell proliferation26074141.IMPProcess
GO:0032991protein-containing complex19013444.IPIComponent
GO:0045926negative regulation of growth26074141.IMPProcess
GO:0071011precatalytic spliceosome18981222.HDAComponent
GO:0071013catalytic step 2 spliceosome18981222.HDAComponent

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