EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0028648 (Gene tree)
Gene ID: 38796
Gene Symbol: mRpL50
Alias: -
Full Name: mitochondrial ribosomal protein L50
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: confidence
Strand: Minus strand
Length: 854 bases
Position: chr3L:7243080-7243933
Accession: FBgn0028648
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0076601	Ribosomal_L50	PF10501.9	5.3e-08	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27378189	Global changes of the RNA bound proteome during the maternal-to-zygotic transition in Drosophila	IC & embryos.MZT	2016 Jul 5	Sysoev VO	DOI: 10.1038/ncomms12128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0076891	-	739	-	FBpp0076601	189 (aa)	-	Q9V3E3

Gene Model

Click here to download FBgn0028648's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0028648's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0028648	mRpL50	74	32.215	ENSAMEG00000000650	MRPL50	91	31.544	Ailuropoda_melanoleuca
FBgn0028648	mRpL50	50	35.644	ENSACAG00000017435	MRPL50	63	35.644	Anolis_carolinensis
FBgn0028648	mRpL50	77	30.769	ENSANAG00000000786	-	97	30.769	Aotus_nancymaae
FBgn0028648	mRpL50	77	33.544	ENSBTAG00000008962	MRPL50	97	33.544	Bos_taurus
FBgn0028648	mRpL50	81	32.143	WBGene00011883	mrpl-50	56	32.298	Caenorhabditis_elegans
FBgn0028648	mRpL50	72	32.192	ENSCJAG00000048689	MRPL50	89	31.034	Callithrix_jacchus
FBgn0028648	mRpL50	77	31.210	ENSCAFG00000032597	MRPL50	62	33.663	Canis_familiaris
FBgn0028648	mRpL50	77	31.847	ENSCAFG00020019468	MRPL50	62	34.653	Canis_lupus_dingo
FBgn0028648	mRpL50	77	32.278	ENSCHIG00000015308	MRPL50	62	35.644	Capra_hircus
FBgn0028648	mRpL50	74	32.192	ENSCPOG00000034033	MRPL50	91	32.192	Cavia_porcellus
FBgn0028648	mRpL50	77	31.013	ENSCCAG00000033569	MRPL50	97	31.013	Cebus_capucinus
FBgn0028648	mRpL50	75	31.126	ENSETEG00000001589	MRPL50	61	34.653	Echinops_telfairi
FBgn0028648	mRpL50	74	33.333	ENSEASG00005022900	MRPL50	91	32.653	Equus_asinus_asinus
FBgn0028648	mRpL50	63	30.534	ENSEEUG00000014898	MRPL50	80	30.508	Erinaceus_europaeus
FBgn0028648	mRpL50	74	32.432	ENSFCAG00000030003	MRPL50	91	32.432	Felis_catus
FBgn0028648	mRpL50	77	33.333	ENSSTOG00000026770	MRPL50	78	34.400	Ictidomys_tridecemlineatus
FBgn0028648	mRpL50	74	31.757	ENSLAFG00000031753	MRPL50	62	35.644	Loxodonta_africana
FBgn0028648	mRpL50	77	31.056	ENSMAUG00000002882	Mrpl50	62	33.333	Mesocricetus_auratus
FBgn0028648	mRpL50	72	34.014	ENSMICG00000045766	-	90	33.333	Microcebus_murinus
FBgn0028648	mRpL50	72	33.333	ENSMICG00000045179	-	90	33.333	Microcebus_murinus
FBgn0028648	mRpL50	72	32.653	ENSMICG00000049266	-	90	32.653	Microcebus_murinus
FBgn0028648	mRpL50	69	30.216	ENSMOCG00000016919	Mrpl50	63	34.000	Microtus_ochrogaster
FBgn0028648	mRpL50	69	31.884	MGP_CAROLIEiJ_G0026011	Mrpl50	78	32.000	Mus_caroli
FBgn0028648	mRpL50	77	31.056	ENSMUSG00000044018	Mrpl50	78	32.000	Mus_musculus
FBgn0028648	mRpL50	69	31.884	MGP_PahariEiJ_G0028347	Mrpl50	78	32.000	Mus_pahari
FBgn0028648	mRpL50	69	31.159	MGP_SPRETEiJ_G0026974	Mrpl50	78	31.200	Mus_spretus
FBgn0028648	mRpL50	74	32.215	ENSMPUG00000006899	MRPL50	91	31.544	Mustela_putorius_furo
FBgn0028648	mRpL50	74	34.228	ENSMLUG00000006011	MRPL50	91	32.432	Myotis_lucifugus
FBgn0028648	mRpL50	72	30.345	ENSNGAG00000021876	Mrpl50	78	32.000	Nannospalax_galili
FBgn0028648	mRpL50	77	30.625	ENSODEG00000005275	MRPL50	100	30.625	Octodon_degus
FBgn0028648	mRpL50	77	30.065	ENSOANG00000004770	MRPL50	65	36.893	Ornithorhynchus_anatinus
FBgn0028648	mRpL50	72	31.973	ENSOGAG00000025381	MRPL50	90	31.507	Otolemur_garnettii
FBgn0028648	mRpL50	77	32.278	ENSOARG00000007538	MRPL50	97	31.210	Ovis_aries
FBgn0028648	mRpL50	74	31.757	ENSPPRG00000002099	MRPL50	91	31.757	Panthera_pardus
FBgn0028648	mRpL50	74	31.757	ENSPTIG00000014107	MRPL50	91	31.757	Panthera_tigris_altaica
FBgn0028648	mRpL50	62	32.031	ENSPCAG00000006809	MRPL50	97	32.283	Procavia_capensis
FBgn0028648	mRpL50	74	34.014	ENSPVAG00000000934	MRPL50	95	31.507	Pteropus_vampyrus
FBgn0028648	mRpL50	77	30.380	ENSSBOG00000022031	MRPL50	78	33.858	Saimiri_boliviensis_boliviensis
FBgn0028648	mRpL50	50	33.010	ENSSHAG00000012132	-	63	33.010	Sarcophilus_harrisii
FBgn0028648	mRpL50	50	34.951	ENSSARG00000013111	MRPL50	97	30.128	Sorex_araneus
FBgn0028648	mRpL50	72	34.483	ENSSPUG00000008348	MRPL50	67	38.095	Sphenodon_punctatus
FBgn0028648	mRpL50	62	32.800	ENSTBEG00000009729	-	97	33.065	Tupaia_belangeri
FBgn0028648	mRpL50	62	32.800	ENSTBEG00000004543	-	97	33.065	Tupaia_belangeri
FBgn0028648	mRpL50	62	31.746	ENSTTRG00000014349	MRPL50	97	32.000	Tursiops_truncatus
FBgn0028648	mRpL50	74	33.557	ENSUAMG00000020927	MRPL50	91	32.886	Ursus_americanus
FBgn0028648	mRpL50	74	33.557	ENSUMAG00000012974	MRPL50	91	32.886	Ursus_maritimus
FBgn0028648	mRpL50	77	32.911	ENSVPAG00000002242	MRPL50	91	34.228	Vicugna_pacos
FBgn0028648	mRpL50	77	30.573	ENSVVUG00000019255	MRPL50	62	33.663	Vulpes_vulpes

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003735	structural constituent of ribosome	17927810.	TAS	Function
GO:0005739	mitochondrion	-	IEA	Component
GO:0005762	mitochondrial large ribosomal subunit	17927810.	TAS	Component
GO:0032543	mitochondrial translation	17927810.	TAS	Process