EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0028683 (Gene tree)
Gene ID: 36387
Gene Symbol: spt4
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Plus strand
Length: 584 bases
Position: chr2R:12633589-12634172
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0086953	Spt4	PF06093.13	9.9e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0087840	-	457	-	FBpp0086953	116 (aa)	-	Q9TVQ5

Gene Model

Click here to download FBgn0028683's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0028683's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0028683	spt4	97	62.500	ENSG00000213246	SUPT4H1	96	62.500	Homo_sapiens
FBgn0028683	spt4	77	57.303	ENSAPOG00000006828	supt4h1	95	57.303	Acanthochromis_polyacanthus
FBgn0028683	spt4	97	62.500	ENSAMEG00000011686	SUPT4H1	96	62.500	Ailuropoda_melanoleuca
FBgn0028683	spt4	77	57.303	ENSACIG00000012162	supt4h1	95	57.303	Amphilophus_citrinellus
FBgn0028683	spt4	97	60.714	ENSAOCG00000022349	supt4h1	96	60.714	Amphiprion_ocellaris
FBgn0028683	spt4	97	60.714	ENSAPEG00000013170	supt4h1	96	60.714	Amphiprion_percula
FBgn0028683	spt4	100	58.621	ENSATEG00000005317	supt4h1	99	58.621	Anabas_testudineus
FBgn0028683	spt4	97	49.558	ENSAPLG00000012497	SUPT4H1	96	49.558	Anas_platyrhynchos
FBgn0028683	spt4	97	61.607	ENSANAG00000026628	SUPT4H1	96	61.607	Aotus_nancymaae
FBgn0028683	spt4	100	58.621	ENSACLG00000005475	supt4h1	99	58.621	Astatotilapia_calliptera
FBgn0028683	spt4	97	57.143	ENSAMXG00000041272	supt4h1	96	57.143	Astyanax_mexicanus
FBgn0028683	spt4	94	51.376	WBGene00005014	spt-4	91	51.376	Caenorhabditis_elegans
FBgn0028683	spt4	97	62.500	ENSCJAG00000017369	SUPT4H1	96	62.500	Callithrix_jacchus
FBgn0028683	spt4	97	62.500	ENSCAFG00000017524	SUPT4H1	96	62.500	Canis_familiaris
FBgn0028683	spt4	97	62.500	ENSCAFG00020025803	SUPT4H1	75	62.500	Canis_lupus_dingo
FBgn0028683	spt4	97	62.500	ENSCHIG00000026783	SUPT4H1	96	62.500	Capra_hircus
FBgn0028683	spt4	97	62.500	ENSTSYG00000030004	SUPT4H1	96	62.500	Carlito_syrichta
FBgn0028683	spt4	97	62.500	ENSCPOG00000031227	SUPT4H1	96	62.500	Cavia_porcellus
FBgn0028683	spt4	97	62.500	ENSCCAG00000034799	SUPT4H1	96	62.500	Cebus_capucinus
FBgn0028683	spt4	100	46.552	ENSCATG00000024314	-	99	46.552	Cercocebus_atys
FBgn0028683	spt4	97	62.500	ENSCATG00000042435	SUPT4H1	96	62.500	Cercocebus_atys
FBgn0028683	spt4	97	62.500	ENSCLAG00000011223	SUPT4H1	96	62.500	Chinchilla_lanigera
FBgn0028683	spt4	97	62.500	ENSCSAG00000005761	SUPT4H1	96	62.500	Chlorocebus_sabaeus
FBgn0028683	spt4	97	50.893	ENSCHOG00000000246	SUPT4H1	96	50.893	Choloepus_hoffmanni
FBgn0028683	spt4	51	64.407	ENSCPBG00000015876	SUPT4H1	100	64.407	Chrysemys_picta_bellii
FBgn0028683	spt4	99	58.261	ENSCING00000019520	spt4	94	58.261	Ciona_intestinalis
FBgn0028683	spt4	99	57.391	ENSCSAVG00000009479	-	94	57.391	Ciona_savignyi
FBgn0028683	spt4	97	62.500	ENSCANG00000034430	SUPT4H1	96	62.500	Colobus_angolensis_palliatus
FBgn0028683	spt4	97	63.393	ENSCGRG00001018056	Supt4a	96	63.393	Cricetulus_griseus_chok1gshd
FBgn0028683	spt4	97	63.393	ENSCGRG00000014047	Supt4a	96	63.393	Cricetulus_griseus_crigri
FBgn0028683	spt4	97	59.821	ENSCSEG00000010897	supt4h1	96	59.821	Cynoglossus_semilaevis
FBgn0028683	spt4	100	57.759	ENSCVAG00000014190	supt4h1	99	57.759	Cyprinodon_variegatus
FBgn0028683	spt4	97	58.036	ENSDARG00000113969	supt4h1	96	58.036	Danio_rerio
FBgn0028683	spt4	97	62.500	ENSDNOG00000032349	SUPT4H1	96	62.500	Dasypus_novemcinctus
FBgn0028683	spt4	97	62.500	ENSDORG00000002826	-	96	62.500	Dipodomys_ordii
FBgn0028683	spt4	95	51.304	ENSDORG00000030049	-	100	52.174	Dipodomys_ordii
FBgn0028683	spt4	65	58.667	ENSEBUG00000006884	supt4h1	99	58.667	Eptatretus_burgeri
FBgn0028683	spt4	97	62.500	ENSEASG00005002787	SUPT4H1	76	62.500	Equus_asinus_asinus
FBgn0028683	spt4	97	62.500	ENSECAG00000016585	SUPT4H1	96	62.500	Equus_caballus
FBgn0028683	spt4	97	60.714	ENSELUG00000019831	supt4h1	96	60.714	Esox_lucius
FBgn0028683	spt4	97	62.500	ENSFCAG00000018732	SUPT4H1	96	62.500	Felis_catus
FBgn0028683	spt4	77	59.551	ENSFALG00000013757	SUPT4H1	95	59.551	Ficedula_albicollis
FBgn0028683	spt4	97	62.500	ENSFDAG00000016718	SUPT4H1	96	62.500	Fukomys_damarensis
FBgn0028683	spt4	100	58.621	ENSFHEG00000009114	supt4h1	99	58.621	Fundulus_heteroclitus
FBgn0028683	spt4	97	58.036	ENSGMOG00000014619	supt4h1	96	58.036	Gadus_morhua
FBgn0028683	spt4	97	61.607	ENSGALG00000000944	SUPT4H1	96	61.607	Gallus_gallus
FBgn0028683	spt4	97	58.929	ENSGAFG00000014374	supt4h1	96	58.929	Gambusia_affinis
FBgn0028683	spt4	97	59.821	ENSGACG00000020237	supt4h1	96	59.821	Gasterosteus_aculeatus
FBgn0028683	spt4	97	45.133	ENSGAGG00000008561	SUPT4H1	87	45.133	Gopherus_agassizii
FBgn0028683	spt4	97	62.500	ENSGGOG00000007232	SUPT4H1	96	62.500	Gorilla_gorilla
FBgn0028683	spt4	96	55.856	ENSHBUG00000000848	-	93	55.856	Haplochromis_burtoni
FBgn0028683	spt4	77	57.303	ENSHBUG00000022528	supt4h1	95	57.303	Haplochromis_burtoni
FBgn0028683	spt4	97	62.500	ENSHGLG00000005007	SUPT4H1	96	62.500	Heterocephalus_glaber_female
FBgn0028683	spt4	97	62.500	ENSHGLG00100018961	SUPT4H1	96	62.500	Heterocephalus_glaber_male
FBgn0028683	spt4	97	61.607	ENSHCOG00000010739	supt4h1	96	61.607	Hippocampus_comes
FBgn0028683	spt4	97	58.036	ENSIPUG00000012062	supt4h1	96	58.036	Ictalurus_punctatus
FBgn0028683	spt4	98	47.863	ENSSTOG00000032338	SUPT4H1	97	47.863	Ictidomys_tridecemlineatus
FBgn0028683	spt4	97	62.500	ENSJJAG00000010938	Supt4a	96	62.500	Jaculus_jaculus
FBgn0028683	spt4	100	59.483	ENSKMAG00000013119	supt4h1	99	59.483	Kryptolebias_marmoratus
FBgn0028683	spt4	97	59.821	ENSLBEG00000018308	supt4h1	96	59.821	Labrus_bergylta
FBgn0028683	spt4	98	62.281	ENSLACG00000016364	SUPT4H1	97	62.281	Latimeria_chalumnae
FBgn0028683	spt4	100	59.483	ENSLOCG00000002970	supt4h1	99	59.483	Lepisosteus_oculatus
FBgn0028683	spt4	97	62.500	ENSLAFG00000020718	SUPT4H1	96	62.500	Loxodonta_africana
FBgn0028683	spt4	97	62.500	ENSMFAG00000003856	SUPT4H1	96	62.500	Macaca_fascicularis
FBgn0028683	spt4	100	45.690	ENSMFAG00000045087	-	99	45.690	Macaca_fascicularis
FBgn0028683	spt4	100	47.414	ENSMMUG00000049176	-	99	47.414	Macaca_mulatta
FBgn0028683	spt4	97	62.500	ENSMMUG00000040655	SUPT4H1	96	62.500	Macaca_mulatta
FBgn0028683	spt4	98	46.491	ENSMNEG00000032891	-	97	46.491	Macaca_nemestrina
FBgn0028683	spt4	97	49.107	ENSMNEG00000034957	-	95	49.107	Macaca_nemestrina
FBgn0028683	spt4	97	62.500	ENSMNEG00000037471	SUPT4H1	96	62.500	Macaca_nemestrina
FBgn0028683	spt4	100	42.241	ENSMLEG00000031477	-	99	42.241	Mandrillus_leucophaeus
FBgn0028683	spt4	97	50.000	ENSMLEG00000040145	-	95	50.000	Mandrillus_leucophaeus
FBgn0028683	spt4	97	62.500	ENSMLEG00000013750	SUPT4H1	96	62.500	Mandrillus_leucophaeus
FBgn0028683	spt4	100	57.759	ENSMAMG00000006148	supt4h1	99	57.759	Mastacembelus_armatus
FBgn0028683	spt4	100	58.621	ENSMZEG00005023783	supt4h1	99	58.621	Maylandia_zebra
FBgn0028683	spt4	97	63.393	ENSMAUG00000013090	Supt4a	96	63.393	Mesocricetus_auratus
FBgn0028683	spt4	97	62.500	ENSMICG00000043219	SUPT4H1	96	62.500	Microcebus_murinus
FBgn0028683	spt4	97	63.393	ENSMOCG00000005545	Supt4a	96	63.393	Microtus_ochrogaster
FBgn0028683	spt4	77	56.180	ENSMMOG00000005411	supt4h1	95	56.180	Mola_mola
FBgn0028683	spt4	97	61.062	ENSMODG00000024427	-	97	61.062	Monodelphis_domestica
FBgn0028683	spt4	97	63.393	ENSMODG00000024938	-	96	63.393	Monodelphis_domestica
FBgn0028683	spt4	100	58.621	ENSMALG00000013156	supt4h1	99	58.621	Monopterus_albus
FBgn0028683	spt4	97	62.500	ENSMUSG00000020485	Supt4a	96	62.500	Mus_musculus
FBgn0028683	spt4	97	62.500	ENSMPUG00000015326	SUPT4H1	93	62.500	Mustela_putorius_furo
FBgn0028683	spt4	97	58.929	ENSMLUG00000027172	-	96	58.929	Myotis_lucifugus
FBgn0028683	spt4	97	58.929	ENSMLUG00000028057	-	96	58.929	Myotis_lucifugus
FBgn0028683	spt4	97	59.821	ENSMLUG00000024867	-	96	59.821	Myotis_lucifugus
FBgn0028683	spt4	97	62.500	ENSMLUG00000025583	-	96	62.500	Myotis_lucifugus
FBgn0028683	spt4	97	62.500	ENSNGAG00000015537	-	96	62.500	Nannospalax_galili
FBgn0028683	spt4	65	44.000	ENSNGAG00000014401	-	99	44.000	Nannospalax_galili
FBgn0028683	spt4	100	58.621	ENSNBRG00000016146	supt4h1	99	58.621	Neolamprologus_brichardi
FBgn0028683	spt4	89	53.398	ENSNLEG00000033851	-	93	53.398	Nomascus_leucogenys
FBgn0028683	spt4	98	45.614	ENSNLEG00000028366	-	80	45.614	Nomascus_leucogenys
FBgn0028683	spt4	97	62.500	ENSNLEG00000008159	-	96	62.500	Nomascus_leucogenys
FBgn0028683	spt4	97	63.393	ENSMEUG00000010164	SUPT4H1	96	63.393	Notamacropus_eugenii
FBgn0028683	spt4	97	43.750	ENSOPRG00000018779	-	96	43.750	Ochotona_princeps
FBgn0028683	spt4	97	62.500	ENSODEG00000011183	SUPT4H1	96	62.500	Octodon_degus
FBgn0028683	spt4	97	62.500	ENSOCUG00000025823	SUPT4H1	96	62.500	Oryctolagus_cuniculus
FBgn0028683	spt4	97	60.714	ENSORLG00000011097	supt4h1	96	60.714	Oryzias_latipes
FBgn0028683	spt4	97	60.714	ENSORLG00020018918	supt4h1	96	60.714	Oryzias_latipes_hni
FBgn0028683	spt4	97	60.714	ENSORLG00015001908	supt4h1	96	60.714	Oryzias_latipes_hsok
FBgn0028683	spt4	100	58.621	ENSOMEG00000009103	supt4h1	99	58.621	Oryzias_melastigma
FBgn0028683	spt4	97	62.500	ENSOGAG00000031972	SUPT4H1	96	62.500	Otolemur_garnettii
FBgn0028683	spt4	97	62.500	ENSOARG00000010021	SUPT4H1	96	62.500	Ovis_aries
FBgn0028683	spt4	97	62.500	ENSPPRG00000010997	SUPT4H1	96	62.500	Panthera_pardus
FBgn0028683	spt4	97	62.500	ENSPTIG00000006503	SUPT4H1	96	62.500	Panthera_tigris_altaica
FBgn0028683	spt4	97	62.500	ENSPTRG00000009451	SUPT4H1	96	62.500	Pan_troglodytes
FBgn0028683	spt4	97	47.321	ENSPANG00000031534	-	95	47.321	Papio_anubis
FBgn0028683	spt4	97	62.500	ENSPANG00000022280	SUPT4H1	96	62.500	Papio_anubis
FBgn0028683	spt4	100	50.862	ENSPKIG00000017008	supt4h1	99	50.862	Paramormyrops_kingsleyae
FBgn0028683	spt4	80	56.989	ENSPSIG00000008272	SUPT4H1	95	56.989	Pelodiscus_sinensis
FBgn0028683	spt4	79	55.435	ENSPMGG00000013558	supt4h1	95	55.435	Periophthalmus_magnuspinnatus
FBgn0028683	spt4	97	63.393	ENSPEMG00000001651	Supt4a	96	63.393	Peromyscus_maniculatus_bairdii
FBgn0028683	spt4	76	48.864	ENSPCIG00000007509	-	77	48.864	Phascolarctos_cinereus
FBgn0028683	spt4	97	63.393	ENSPCIG00000015610	-	96	63.393	Phascolarctos_cinereus
FBgn0028683	spt4	97	58.929	ENSPFOG00000018406	supt4h1	96	58.929	Poecilia_formosa
FBgn0028683	spt4	97	58.929	ENSPLAG00000012498	supt4h1	96	58.929	Poecilia_latipinna
FBgn0028683	spt4	97	58.929	ENSPMEG00000011887	supt4h1	96	58.929	Poecilia_mexicana
FBgn0028683	spt4	81	60.638	ENSPREG00000008031	supt4h1	75	52.128	Poecilia_reticulata
FBgn0028683	spt4	97	62.500	ENSPPYG00000008233	SUPT4H1	96	62.500	Pongo_abelii
FBgn0028683	spt4	97	62.500	ENSPCOG00000016589	SUPT4H1	96	62.500	Propithecus_coquereli
FBgn0028683	spt4	97	62.500	ENSPVAG00000002320	SUPT4H1	96	62.500	Pteropus_vampyrus
FBgn0028683	spt4	100	58.621	ENSPNYG00000016837	supt4h1	99	58.621	Pundamilia_nyererei
FBgn0028683	spt4	77	55.056	ENSPNAG00000009422	supt4h1	95	55.056	Pygocentrus_nattereri
FBgn0028683	spt4	97	62.500	ENSRNOG00000007845	Supt4h1	96	62.500	Rattus_norvegicus
FBgn0028683	spt4	97	62.500	ENSRBIG00000043489	SUPT4H1	96	62.500	Rhinopithecus_bieti
FBgn0028683	spt4	97	62.500	ENSRROG00000045659	SUPT4H1	96	62.500	Rhinopithecus_roxellana
FBgn0028683	spt4	88	36.275	YGR063C	-	94	36.275	Saccharomyces_cerevisiae
FBgn0028683	spt4	97	62.500	ENSSBOG00000031578	SUPT4H1	96	62.500	Saimiri_boliviensis_boliviensis
FBgn0028683	spt4	61	56.338	ENSSFOG00015001230	supt4h1	93	56.338	Scleropages_formosus
FBgn0028683	spt4	100	58.621	ENSSMAG00000000422	supt4h1	99	58.621	Scophthalmus_maximus
FBgn0028683	spt4	100	58.621	ENSSDUG00000017639	supt4h1	99	58.621	Seriola_dumerili
FBgn0028683	spt4	100	58.621	ENSSLDG00000019831	supt4h1	99	58.621	Seriola_lalandi_dorsalis
FBgn0028683	spt4	97	61.607	ENSSPUG00000001513	SUPT4H1	96	61.607	Sphenodon_punctatus
FBgn0028683	spt4	100	58.621	ENSSPAG00000017849	supt4h1	99	58.621	Stegastes_partitus
FBgn0028683	spt4	97	62.500	ENSSSCG00000034752	SUPT4H1	96	62.500	Sus_scrofa
FBgn0028683	spt4	100	58.621	ENSTRUG00000021118	supt4h1	99	58.621	Takifugu_rubripes
FBgn0028683	spt4	100	56.897	ENSTNIG00000008553	supt4h1	99	56.897	Tetraodon_nigroviridis
FBgn0028683	spt4	97	62.500	ENSUAMG00000005160	SUPT4H1	96	62.500	Ursus_americanus
FBgn0028683	spt4	97	62.500	ENSUMAG00000022805	SUPT4H1	96	62.500	Ursus_maritimus
FBgn0028683	spt4	77	59.551	ENSVPAG00000009628	SUPT4H1	95	59.551	Vicugna_pacos
FBgn0028683	spt4	97	62.500	ENSVVUG00000012505	SUPT4H1	96	62.500	Vulpes_vulpes
FBgn0028683	spt4	98	50.435	ENSXETG00000025331	supt4h1	97	50.435	Xenopus_tropicalis
FBgn0028683	spt4	77	55.056	ENSXCOG00000005652	supt4h1	95	55.056	Xiphophorus_couchianus
FBgn0028683	spt4	97	58.929	ENSXMAG00000005633	supt4h1	96	58.929	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000122	negative regulation of transcription by RNA polymerase II	12782658.28213523.	IDA	Process
GO:0000122	negative regulation of transcription by RNA polymerase II	-	ISS	Process
GO:0000993	RNA polymerase II complex binding	21873635.	IBA	Function
GO:0000993	RNA polymerase II complex binding	28213523.	IDA	Function
GO:0003727	single-stranded RNA binding	21873635.	IBA	Function
GO:0005634	nucleus	15056674.	IDA	Component
GO:0005634	nucleus	-	ISS	Component
GO:0005703	polytene chromosome puff	12782658.	IDA	Component
GO:0005705	polytene chromosome interband	12782658.	IDA	Component
GO:0006325	chromatin organization	21873635.	IBA	Process
GO:0006368	transcription elongation from RNA polymerase II promoter	12782658.	IDA	Process
GO:0006368	transcription elongation from RNA polymerase II promoter	-	ISS	Process
GO:0008023	transcription elongation factor complex	15056674.	IDA	Component
GO:0008270	zinc ion binding	-	IEA	Function
GO:0032044	DSIF complex	21873635.	IBA	Component
GO:0032044	DSIF complex	28213523.	IDA	Component
GO:0032785	negative regulation of DNA-templated transcription, elongation	12782658.	IDA	Process
GO:0032785	negative regulation of DNA-templated transcription, elongation	-	ISS	Process
GO:0032786	positive regulation of DNA-templated transcription, elongation	-	ISS	Process
GO:0045944	positive regulation of transcription by RNA polymerase II	-	ISS	Process
GO:0046982	protein heterodimerization activity	-	ISS	Function