EuRBPDB

Description

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0028688 (Gene tree)
Gene ID: 42641
Gene Symbol: Rpn7
Alias: -
Full Name: Regulatory particle non-ATPase 7
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Minus strand
Length: 1393
Position: chr3R: 22460662-22462054
Accession: FBgn0028688
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27378189	Global changes of the RNA bound proteome during the maternal-to-zygotic transition in Drosophila	IC & embryos.MZT	2016 Jul 5	Sysoev VO	DOI: 10.1038/ncomms12128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0084294	-	1393	-	FBpp0083687	389 (aa)	-	Q9V3G7

Gene Model

Click here to download FBgn0028688's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0028688's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0028688	Rpn7	99	47.089	WBGene00004463	rpn-7	96	47.089	Caenorhabditis_elegans
FBgn0028688	Rpn7	100	70.180	ENSG00000163636	PSMD6	99	71.552	Homo_sapiens
FBgn0028688	Rpn7	96	34.406	YPR108W		94	35.149	Saccharomyces_cerevisiae

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000502	proteasome complex	19581588.	IDA	Component
GO:0005515	protein binding	22187461.	IPI	Function
GO:0005838	proteasome regulatory particle	21873635.	IBA	Component
GO:0005838	proteasome regulatory particle	10893261.14652013.15946124.	IDA	Component
GO:0005838	proteasome regulatory particle	10893261.	ISS	Component
GO:0008541	proteasome regulatory particle, lid subcomplex	10893261.	ISS	Component
GO:0030234	enzyme regulator activity	-	IEA	Function
GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process	21873635.	IBA	Process
GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process	14652013.	IC	Process
GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process	23800266.	IMP	Process