EuRBPDB

Description

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0028689 (Gene tree)
Gene ID: 36638
Gene Symbol: Rpn6
Alias: -
Full Name: Regulatory particle non-ATPase 6
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Minus strand
Length: 2745
Position: chr2R: 14750166-14752910
Accession: FBgn0028689
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27378189	Global changes of the RNA bound proteome during the maternal-to-zygotic transition in Drosophila	IC & embryos.MZT	2016 Jul 5	Sysoev VO	DOI: 10.1038/ncomms12128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0306558	-	1662	-	FBpp0297513	422 (aa)	-	Q7KLV9
FBtr0087475	-	1827	-	FBpp0086604	422 (aa)	-	Q7KLV9
FBtr0087474	-	1612	-	FBpp0086603	439 (aa)	-	Q7KLV9

Gene Model

Click here to download FBgn0028689's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0028689's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0028689	Rpn6	100	67.925	ENSG00000108671	PSMD11	97	85.057	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000502	proteasome complex	19581588.	IDA	Component
GO:0005198	structural molecule activity	21873635.	IBA	Function
GO:0005515	protein binding	22187461.	IPI	Function
GO:0005838	proteasome regulatory particle	10893261.14652013.	IDA	Component
GO:0005838	proteasome regulatory particle	10893261.	ISS	Component
GO:0006511	ubiquitin-dependent protein catabolic process	21873635.	IBA	Process
GO:0008541	proteasome regulatory particle, lid subcomplex	21873635.	IBA	Component
GO:0008541	proteasome regulatory particle, lid subcomplex	10893261.	ISS	Component
GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process	14652013.	IC	Process
GO:0043248	proteasome assembly	21873635.	IBA	Process