EuRBPDB

Description

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0028695 (Gene tree)
Gene ID: 40174
Gene Symbol: Rpn1
Alias: -
Full Name: Regulatory particle non-ATPase 1
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Plus strand
Length: 3110
Position: chr3L: 19915051-19918160
Accession: FBgn0028695
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27197210	The mRNA-bound proteome of the early fly embryo	IC & embryos	2016 Apr 28	Wessels HH	DOI: 10.1101/gr.200386.115

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0074893	-	3041	-	FBpp0074662	919 (aa)	-	Q9VW54

Gene Model

Click here to download FBgn0028695's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0028695's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0028695	Rpn1	99	61.304	ENSG00000175166	PSMD2	99	63.553	Homo_sapiens
FBgn0028695	Rpn1	95	40.580	YHR027C	RPN1	85	51.575	Saccharomyces_cerevisiae

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000502	proteasome complex	19581588.	IDA	Component
GO:0004175	endopeptidase activity	21873635.	IBA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005838	proteasome regulatory particle	10893261.14652013.15946124.	IDA	Component
GO:0005838	proteasome regulatory particle	10893261.	ISS	Component
GO:0008270	zinc ion binding	15946124.	IDA	Function
GO:0008540	proteasome regulatory particle, base subcomplex	21873635.	IBA	Component
GO:0008540	proteasome regulatory particle, base subcomplex	10893261.	ISS	Component
GO:0030234	enzyme regulator activity	-	IEA	Function
GO:0034515	proteasome storage granule	21873635.	IBA	Component
GO:0042176	regulation of protein catabolic process	-	IEA	Process
GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process	21873635.	IBA	Process
GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process	14652013.	IC	Process
GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process	23800266.	IMP	Process