EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0028982 (Gene tree)
Gene ID: 44000
Gene Symbol: Spt6
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Plus strand
Length: 7188 bases
Position: chrX:6267797-6274984
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0070861	S1	PF00575.23	4.1e-10	1	1
FBpp0309041	S1	PF00575.23	4.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0340027	-	6070	-	FBpp0309041	1831 (aa)	-	Q9W420
FBtr0070896	-	6166	-	FBpp0070861	1831 (aa)	-	Q9W420

Gene Model

Click here to download FBgn0028982's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0028982's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0028982	Spt6	86	48.494	ENSG00000109111	SUPT6H	95	47.258	Homo_sapiens
FBgn0028982	Spt6	77	49.930	ENSAPOG00000019366	supt6h	94	47.415	Acanthochromis_polyacanthus
FBgn0028982	Spt6	86	48.494	ENSAMEG00000004744	SUPT6H	95	47.258	Ailuropoda_melanoleuca
FBgn0028982	Spt6	78	48.967	ENSACIG00000004887	supt6h	91	48.818	Amphilophus_citrinellus
FBgn0028982	Spt6	80	48.861	ENSAOCG00000007013	supt6h	92	48.088	Amphiprion_ocellaris
FBgn0028982	Spt6	80	48.861	ENSAPEG00000018434	supt6h	93	48.157	Amphiprion_percula
FBgn0028982	Spt6	81	47.477	ENSATEG00000006950	supt6h	89	48.699	Anabas_testudineus
FBgn0028982	Spt6	85	49.147	ENSAPLG00000001319	SUPT6H	91	48.589	Anas_platyrhynchos
FBgn0028982	Spt6	86	48.494	ENSANAG00000029355	SUPT6H	95	47.119	Aotus_nancymaae
FBgn0028982	Spt6	82	47.963	ENSACLG00000005753	supt6h	93	48.768	Astatotilapia_calliptera
FBgn0028982	Spt6	81	48.776	ENSAMXG00000006025	supt6h	96	47.553	Astyanax_mexicanus
FBgn0028982	Spt6	86	48.494	ENSBTAG00000009036	SUPT6H	95	47.076	Bos_taurus
FBgn0028982	Spt6	74	35.328	WBGene00001259	emb-5	89	35.091	Caenorhabditis_elegans
FBgn0028982	Spt6	84	49.041	ENSCJAG00000012982	SUPT6H	92	49.073	Callithrix_jacchus
FBgn0028982	Spt6	86	48.494	ENSCAFG00000018763	SUPT6H	95	47.258	Canis_familiaris
FBgn0028982	Spt6	86	48.494	ENSCAFG00020011752	SUPT6H	95	47.258	Canis_lupus_dingo
FBgn0028982	Spt6	86	48.432	ENSCHIG00000025101	SUPT6H	95	47.018	Capra_hircus
FBgn0028982	Spt6	86	48.683	ENSTSYG00000004539	SUPT6H	95	47.433	Carlito_syrichta
FBgn0028982	Spt6	74	49.167	ENSCAPG00000016785	SUPT6H	88	54.478	Cavia_aperea
FBgn0028982	Spt6	86	48.557	ENSCPOG00000001442	SUPT6H	95	47.316	Cavia_porcellus
FBgn0028982	Spt6	86	48.494	ENSCCAG00000031442	SUPT6H	95	47.316	Cebus_capucinus
FBgn0028982	Spt6	86	48.494	ENSCATG00000041242	SUPT6H	95	47.258	Cercocebus_atys
FBgn0028982	Spt6	86	48.557	ENSCLAG00000006422	SUPT6H	95	47.316	Chinchilla_lanigera
FBgn0028982	Spt6	70	51.441	ENSCSAG00000007178	SUPT6H	85	48.858	Chlorocebus_sabaeus
FBgn0028982	Spt6	85	49.462	ENSCPBG00000020288	SUPT6H	94	47.864	Chrysemys_picta_bellii
FBgn0028982	Spt6	86	48.432	ENSCANG00000026929	SUPT6H	95	47.258	Colobus_angolensis_palliatus
FBgn0028982	Spt6	87	48.562	ENSCGRG00000008708	Supt6	95	47.258	Cricetulus_griseus_crigri
FBgn0028982	Spt6	82	48.485	ENSCSEG00000018147	supt6h	95	48.792	Cynoglossus_semilaevis
FBgn0028982	Spt6	81	48.451	ENSCVAG00000021195	supt6h	95	48.965	Cyprinodon_variegatus
FBgn0028982	Spt6	81	48.575	ENSDARG00000006524	supt6h	93	47.876	Danio_rerio
FBgn0028982	Spt6	86	48.557	ENSDNOG00000019476	SUPT6H	95	47.316	Dasypus_novemcinctus
FBgn0028982	Spt6	86	48.557	ENSEASG00005009905	SUPT6H	95	47.316	Equus_asinus_asinus
FBgn0028982	Spt6	86	48.557	ENSECAG00000020521	SUPT6H	95	47.316	Equus_caballus
FBgn0028982	Spt6	55	47.587	ENSEEUG00000008265	-	57	47.587	Erinaceus_europaeus
FBgn0028982	Spt6	78	49.656	ENSELUG00000022246	SUPT6H	96	47.793	Esox_lucius
FBgn0028982	Spt6	80	48.818	ENSELUG00000005639	supt6h	90	48.372	Esox_lucius
FBgn0028982	Spt6	86	48.557	ENSFCAG00000004014	SUPT6H	95	47.316	Felis_catus
FBgn0028982	Spt6	85	49.240	ENSFALG00000006393	SUPT6H	92	48.198	Ficedula_albicollis
FBgn0028982	Spt6	86	48.683	ENSFDAG00000016453	SUPT6H	95	47.375	Fukomys_damarensis
FBgn0028982	Spt6	81	48.374	ENSFHEG00000004556	supt6h	90	48.564	Fundulus_heteroclitus
FBgn0028982	Spt6	82	48.255	ENSGMOG00000007109	supt6h	92	47.834	Gadus_morhua
FBgn0028982	Spt6	85	49.462	ENSGALG00000000146	SUPT6H	91	48.893	Gallus_gallus
FBgn0028982	Spt6	81	47.823	ENSGAFG00000000803	supt6h	92	49.105	Gambusia_affinis
FBgn0028982	Spt6	83	47.925	ENSGACG00000020513	supt6h	99	51.244	Gasterosteus_aculeatus
FBgn0028982	Spt6	85	49.398	ENSGAGG00000016728	SUPT6H	94	47.097	Gopherus_agassizii
FBgn0028982	Spt6	86	48.557	ENSGGOG00000016688	SUPT6H	95	47.316	Gorilla_gorilla
FBgn0028982	Spt6	82	48.029	ENSHBUG00000021694	supt6h	92	49.207	Haplochromis_burtoni
FBgn0028982	Spt6	86	48.557	ENSHGLG00000018764	SUPT6H	95	47.258	Heterocephalus_glaber_female
FBgn0028982	Spt6	86	48.557	ENSHGLG00100018216	SUPT6H	95	47.258	Heterocephalus_glaber_male
FBgn0028982	Spt6	86	47.625	ENSIPUG00000024533	supt6h	94	48.444	Ictalurus_punctatus
FBgn0028982	Spt6	86	48.716	ENSSTOG00000000577	SUPT6H	95	47.491	Ictidomys_tridecemlineatus
FBgn0028982	Spt6	86	48.557	ENSJJAG00000013309	Supt6	95	47.316	Jaculus_jaculus
FBgn0028982	Spt6	86	47.190	ENSKMAG00000019294	supt6h	89	48.240	Kryptolebias_marmoratus
FBgn0028982	Spt6	86	47.785	ENSLBEG00000027907	supt6h	95	47.444	Labrus_bergylta
FBgn0028982	Spt6	87	48.585	ENSLACG00000003186	SUPT6H	92	49.076	Latimeria_chalumnae
FBgn0028982	Spt6	86	48.557	ENSLAFG00000017945	SUPT6H	95	47.375	Loxodonta_africana
FBgn0028982	Spt6	86	48.494	ENSMFAG00000040784	SUPT6H	95	47.258	Macaca_fascicularis
FBgn0028982	Spt6	86	48.494	ENSMMUG00000004708	SUPT6H	95	47.258	Macaca_mulatta
FBgn0028982	Spt6	86	48.494	ENSMLEG00000030076	SUPT6H	97	47.258	Mandrillus_leucophaeus
FBgn0028982	Spt6	81	49.508	ENSMAMG00000020232	supt6h	94	48.329	Mastacembelus_armatus
FBgn0028982	Spt6	82	47.963	ENSMZEG00005024774	supt6h	93	48.768	Maylandia_zebra
FBgn0028982	Spt6	85	49.462	ENSMGAG00000005881	SUPT6H	91	49.077	Meleagris_gallopavo
FBgn0028982	Spt6	87	48.625	ENSMAUG00000012146	Supt6	95	47.258	Mesocricetus_auratus
FBgn0028982	Spt6	86	48.252	ENSMICG00000016884	SUPT6H	95	47.062	Microcebus_murinus
FBgn0028982	Spt6	87	48.500	ENSMOCG00000021959	Supt6	95	47.227	Microtus_ochrogaster
FBgn0028982	Spt6	81	48.173	ENSMMOG00000010942	supt6h	89	48.650	Mola_mola
FBgn0028982	Spt6	90	47.596	ENSMODG00000019291	SUPT6H	95	47.436	Monodelphis_domestica
FBgn0028982	Spt6	81	48.980	ENSMALG00000000093	supt6h	91	48.802	Monopterus_albus
FBgn0028982	Spt6	87	48.500	MGP_CAROLIEiJ_G0016796	Supt6	95	47.213	Mus_caroli
FBgn0028982	Spt6	87	48.500	ENSMUSG00000002052	Supt6	95	47.213	Mus_musculus
FBgn0028982	Spt6	87	48.023	MGP_PahariEiJ_G0017933	Supt6	95	46.643	Mus_pahari
FBgn0028982	Spt6	87	48.500	MGP_SPRETEiJ_G0017639	Supt6	95	47.213	Mus_spretus
FBgn0028982	Spt6	86	48.557	ENSMPUG00000014195	SUPT6H	95	47.316	Mustela_putorius_furo
FBgn0028982	Spt6	86	48.620	ENSMLUG00000012423	SUPT6H	95	47.375	Myotis_lucifugus
FBgn0028982	Spt6	86	48.620	ENSNGAG00000012801	Supt6	95	47.375	Nannospalax_galili
FBgn0028982	Spt6	80	48.789	ENSNBRG00000001035	supt6h	97	48.582	Neolamprologus_brichardi
FBgn0028982	Spt6	86	47.637	ENSNLEG00000002730	SUPT6H	95	46.573	Nomascus_leucogenys
FBgn0028982	Spt6	80	47.876	ENSMEUG00000009404	SUPT6H	85	47.876	Notamacropus_eugenii
FBgn0028982	Spt6	87	48.500	ENSOPRG00000012549	SUPT6H	95	47.433	Ochotona_princeps
FBgn0028982	Spt6	86	48.432	ENSODEG00000011930	SUPT6H	95	47.200	Octodon_degus
FBgn0028982	Spt6	82	47.961	ENSONIG00000005512	supt6h	90	48.297	Oreochromis_niloticus
FBgn0028982	Spt6	87	48.222	ENSOCUG00000000848	SUPT6H	95	46.942	Oryctolagus_cuniculus
FBgn0028982	Spt6	82	48.682	ENSORLG00000003098	supt6h	88	48.895	Oryzias_latipes
FBgn0028982	Spt6	82	48.682	ENSORLG00020016222	supt6h	89	47.719	Oryzias_latipes_hni
FBgn0028982	Spt6	82	48.682	ENSORLG00015021046	supt6h	89	47.719	Oryzias_latipes_hsok
FBgn0028982	Spt6	81	48.943	ENSOMEG00000010277	supt6h	91	47.750	Oryzias_melastigma
FBgn0028982	Spt6	86	46.475	ENSOGAG00000012089	SUPT6H	95	45.407	Otolemur_garnettii
FBgn0028982	Spt6	86	48.434	ENSOARG00000002727	SUPT6H	95	47.028	Ovis_aries
FBgn0028982	Spt6	86	48.620	ENSPPAG00000036720	SUPT6H	92	48.931	Pan_paniscus
FBgn0028982	Spt6	86	48.341	ENSPPRG00000024588	SUPT6H	95	47.258	Panthera_pardus
FBgn0028982	Spt6	86	48.058	ENSPTIG00000014860	SUPT6H	95	46.853	Panthera_tigris_altaica
FBgn0028982	Spt6	86	48.620	ENSPTRG00000008929	SUPT6H	92	48.931	Pan_troglodytes
FBgn0028982	Spt6	82	49.829	ENSPANG00000023444	SUPT6H	93	48.837	Papio_anubis
FBgn0028982	Spt6	89	47.482	ENSPKIG00000013468	supt6h	95	46.578	Paramormyrops_kingsleyae
FBgn0028982	Spt6	87	48.562	ENSPEMG00000009972	Supt6	95	46.849	Peromyscus_maniculatus_bairdii
FBgn0028982	Spt6	90	47.656	ENSPCIG00000017943	SUPT6H	95	47.494	Phascolarctos_cinereus
FBgn0028982	Spt6	81	48.441	ENSPFOG00000011171	supt6h	87	48.579	Poecilia_formosa
FBgn0028982	Spt6	78	49.139	ENSPLAG00000005137	supt6h	89	49.289	Poecilia_latipinna
FBgn0028982	Spt6	81	48.441	ENSPMEG00000013302	supt6h	87	48.579	Poecilia_mexicana
FBgn0028982	Spt6	81	48.308	ENSPREG00000009725	supt6h	90	48.166	Poecilia_reticulata
FBgn0028982	Spt6	86	45.922	ENSPPYG00000008105	SUPT6H	94	44.866	Pongo_abelii
FBgn0028982	Spt6	86	48.053	ENSPCOG00000021329	SUPT6H	95	46.866	Propithecus_coquereli
FBgn0028982	Spt6	82	47.800	ENSPNYG00000017271	supt6h	95	48.446	Pundamilia_nyererei
FBgn0028982	Spt6	80	48.803	ENSPNAG00000015154	supt6h	89	48.708	Pygocentrus_nattereri
FBgn0028982	Spt6	87	48.562	ENSRNOG00000012240	Supt6h	95	47.271	Rattus_norvegicus
FBgn0028982	Spt6	86	48.494	ENSRBIG00000015392	SUPT6H	95	47.258	Rhinopithecus_bieti
FBgn0028982	Spt6	86	48.494	ENSRROG00000035461	SUPT6H	95	47.258	Rhinopithecus_roxellana
FBgn0028982	Spt6	88	46.016	ENSSBOG00000028535	SUPT6H	95	46.188	Saimiri_boliviensis_boliviensis
FBgn0028982	Spt6	90	47.271	ENSSHAG00000014414	SUPT6H	98	47.273	Sarcophilus_harrisii
FBgn0028982	Spt6	86	47.407	ENSSFOG00015005320	supt6h	92	47.077	Scleropages_formosus
FBgn0028982	Spt6	81	49.072	ENSSMAG00000000771	supt6h	96	48.177	Scophthalmus_maximus
FBgn0028982	Spt6	78	48.514	ENSSDUG00000016786	supt6h	86	48.190	Seriola_dumerili
FBgn0028982	Spt6	78	47.619	ENSSLDG00000014842	supt6h	86	47.337	Seriola_lalandi_dorsalis
FBgn0028982	Spt6	86	47.616	ENSSARG00000006988	SUPT6H	95	46.383	Sorex_araneus
FBgn0028982	Spt6	85	49.399	ENSSPUG00000006119	SUPT6H	95	46.963	Sphenodon_punctatus
FBgn0028982	Spt6	82	48.353	ENSSPAG00000016590	supt6h	93	48.591	Stegastes_partitus
FBgn0028982	Spt6	82	49.040	ENSSSCG00000017773	SUPT6H	98	47.163	Sus_scrofa
FBgn0028982	Spt6	85	49.144	ENSTGUG00000006101	SUPT6H	92	48.624	Taeniopygia_guttata
FBgn0028982	Spt6	82	48.024	ENSTRUG00000014399	supt6h	92	47.091	Takifugu_rubripes
FBgn0028982	Spt6	82	47.167	ENSTNIG00000016157	supt6h	93	46.407	Tetraodon_nigroviridis
FBgn0028982	Spt6	79	45.380	ENSTBEG00000001874	SUPT6H	86	45.844	Tupaia_belangeri
FBgn0028982	Spt6	86	48.062	ENSTTRG00000004092	SUPT6H	95	47.230	Tursiops_truncatus
FBgn0028982	Spt6	87	52.688	ENSUAMG00000003188	SUPT6H	96	49.668	Ursus_americanus
FBgn0028982	Spt6	86	48.432	ENSUMAG00000011783	SUPT6H	95	47.200	Ursus_maritimus
FBgn0028982	Spt6	86	48.494	ENSVVUG00000017049	SUPT6H	95	47.258	Vulpes_vulpes
FBgn0028982	Spt6	85	47.464	ENSXETG00000019265	supt6h	95	45.853	Xenopus_tropicalis
FBgn0028982	Spt6	80	47.861	ENSXMAG00000014242	supt6h	89	48.892	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000993	RNA polymerase II complex binding	12934007.	IDA	Function
GO:0003677	DNA binding	-	IEA	Function
GO:0003682	chromatin binding	17174895.	IDA	Function
GO:0005634	nucleus	17174895.	IDA	Component
GO:0005703	polytene chromosome puff	11040216.11040217.12934007.	IDA	Component
GO:0005705	polytene chromosome interband	11040216.	IDA	Component
GO:0006366	transcription by RNA polymerase II	11040216.	IEP	Process
GO:0006368	transcription elongation from RNA polymerase II promoter	21873635.	IBA	Process
GO:0006963	positive regulation of antibacterial peptide biosynthetic process	20421637.	IMP	Process
GO:0008023	transcription elongation factor complex	21873635.	IBA	Component
GO:0008023	transcription elongation factor complex	12934007.	IPI	Component
GO:0030707	ovarian follicle cell development	26205122.	IMP	Process
GO:0031491	nucleosome binding	21873635.	IBA	Function
GO:0032968	positive regulation of transcription elongation from RNA polymerase II promoter	21873635.	IBA	Process
GO:0032968	positive regulation of transcription elongation from RNA polymerase II promoter	17174895.19279664.	IMP	Process
GO:0034728	nucleosome organization	21873635.	IBA	Process
GO:0035327	transcriptionally active chromatin	21873635.	IBA	Component
GO:0035327	transcriptionally active chromatin	12490954.	IDA	Component
GO:0035363	histone locus body	21576393.	IDA	Component
GO:0042393	histone binding	21873635.	IBA	Function
GO:0042789	mRNA transcription by RNA polymerase II	21873635.	IBA	Process
GO:0050684	regulation of mRNA processing	21873635.	IBA	Process
GO:0070827	chromatin maintenance	21873635.	IBA	Process