EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0029672 (Gene tree)
Gene ID: 31326
Gene Symbol: CG2875
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Minus strand
Length: 2167 bases
Position: chrX:3571456-3573622
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0070561	CBF	PF03914.17	7.1e-29	1	1
FBpp0070562	CBF	PF03914.17	7.3e-29	1	1
FBpp0305927	CBF	PF03914.17	7.3e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0070587	-	1710	-	FBpp0070562	496 (aa)	-	Q9W4R2
FBtr0333793	-	1975	-	FBpp0305927	496 (aa)	-	Q9W4R2
FBtr0070586	-	1713	-	FBpp0070561	497 (aa)	-	Q9W4R1

Gene Model

Click here to download FBgn0029672's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0029672's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0029672	CG2875	73	30.585	ENSG00000184967	NOC4L	72	30.851	Homo_sapiens
FBgn0029672	CG2875	73	32.626	ENSAMEG00000013649	NOC4L	74	32.626	Ailuropoda_melanoleuca
FBgn0029672	CG2875	78	32.832	ENSACAG00000007479	NOC4L	72	32.832	Anolis_carolinensis
FBgn0029672	CG2875	73	31.034	ENSANAG00000035196	NOC4L	72	31.034	Aotus_nancymaae
FBgn0029672	CG2875	75	31.026	ENSACLG00000020832	noc4l	73	31.026	Astatotilapia_calliptera
FBgn0029672	CG2875	82	30.496	ENSAMXG00000008720	noc4l	80	30.496	Astyanax_mexicanus
FBgn0029672	CG2875	93	30.081	ENSBTAG00000011889	NOC4L	94	30.081	Bos_taurus
FBgn0029672	CG2875	73	33.333	ENSCAFG00000006300	NOC4L	72	33.333	Canis_familiaris
FBgn0029672	CG2875	73	33.333	ENSCAFG00020010316	NOC4L	72	33.333	Canis_lupus_dingo
FBgn0029672	CG2875	64	36.533	ENSTSYG00000025452	NOC4L	78	33.690	Carlito_syrichta
FBgn0029672	CG2875	73	32.011	ENSCAPG00000011665	NOC4L	86	32.011	Cavia_aperea
FBgn0029672	CG2875	73	32.011	ENSCPOG00000021166	NOC4L	72	32.011	Cavia_porcellus
FBgn0029672	CG2875	73	31.467	ENSCATG00000035699	NOC4L	72	31.915	Cercocebus_atys
FBgn0029672	CG2875	73	32.708	ENSCLAG00000007550	NOC4L	72	32.708	Chinchilla_lanigera
FBgn0029672	CG2875	78	31.095	ENSCPBG00000024642	NOC4L	78	31.095	Chrysemys_picta_bellii
FBgn0029672	CG2875	56	34.397	ENSCING00000011753	-	53	34.397	Ciona_intestinalis
FBgn0029672	CG2875	73	32.888	ENSCGRG00001004291	Noc4l	72	32.888	Cricetulus_griseus_chok1gshd
FBgn0029672	CG2875	73	32.888	ENSCGRG00000005706	Noc4l	75	32.888	Cricetulus_griseus_crigri
FBgn0029672	CG2875	75	31.620	ENSCSEG00000003635	noc4l	73	31.620	Cynoglossus_semilaevis
FBgn0029672	CG2875	82	31.043	ENSDARG00000045565	noc4l	80	31.043	Danio_rerio
FBgn0029672	CG2875	73	34.309	ENSDORG00000015155	Noc4l	94	30.060	Dipodomys_ordii
FBgn0029672	CG2875	83	31.354	ENSEBUG00000001980	noc4l	93	31.354	Eptatretus_burgeri
FBgn0029672	CG2875	73	32.021	ENSEASG00005016651	NOC4L	73	32.021	Equus_asinus_asinus
FBgn0029672	CG2875	74	32.454	ENSECAG00000024217	NOC4L	74	31.606	Equus_caballus
FBgn0029672	CG2875	82	30.733	ENSELUG00000010483	noc4l	79	30.733	Esox_lucius
FBgn0029672	CG2875	73	32.979	ENSFCAG00000010783	NOC4L	72	32.979	Felis_catus
FBgn0029672	CG2875	78	31.841	ENSFALG00000008259	NOC4L	94	31.841	Ficedula_albicollis
FBgn0029672	CG2875	72	33.333	ENSFDAG00000001178	NOC4L	73	33.333	Fukomys_damarensis
FBgn0029672	CG2875	85	30.137	ENSFHEG00000010492	noc4l	83	30.137	Fundulus_heteroclitus
FBgn0029672	CG2875	81	30.641	ENSGMOG00000003087	noc4l	78	30.641	Gadus_morhua
FBgn0029672	CG2875	77	32.405	ENSGAGG00000016459	NOC4L	83	32.234	Gopherus_agassizii
FBgn0029672	CG2875	73	31.034	ENSGGOG00000010266	NOC4L	72	31.300	Gorilla_gorilla
FBgn0029672	CG2875	73	33.156	ENSHGLG00000011672	NOC4L	72	33.156	Heterocephalus_glaber_female
FBgn0029672	CG2875	73	33.156	ENSHGLG00100017890	NOC4L	72	33.156	Heterocephalus_glaber_male
FBgn0029672	CG2875	82	30.930	ENSIPUG00000010363	noc4l	80	30.930	Ictalurus_punctatus
FBgn0029672	CG2875	73	32.626	ENSSTOG00000022612	NOC4L	72	32.626	Ictidomys_tridecemlineatus
FBgn0029672	CG2875	73	32.520	ENSJJAG00000020377	Noc4l	72	32.520	Jaculus_jaculus
FBgn0029672	CG2875	87	30.704	ENSKMAG00000012718	noc4l	88	30.704	Kryptolebias_marmoratus
FBgn0029672	CG2875	78	30.788	ENSLACG00000018559	NOC4L	77	30.788	Latimeria_chalumnae
FBgn0029672	CG2875	54	40.221	ENSLOCG00000006060	noc4l	51	40.221	Lepisosteus_oculatus
FBgn0029672	CG2875	73	34.133	ENSLAFG00000027295	NOC4L	72	34.133	Loxodonta_africana
FBgn0029672	CG2875	73	30.851	ENSMFAG00000046313	NOC4L	72	31.117	Macaca_fascicularis
FBgn0029672	CG2875	73	30.851	ENSMMUG00000006735	NOC4L	72	31.117	Macaca_mulatta
FBgn0029672	CG2875	73	30.851	ENSMNEG00000043745	NOC4L	72	31.117	Macaca_nemestrina
FBgn0029672	CG2875	73	31.117	ENSMLEG00000032574	NOC4L	78	31.383	Mandrillus_leucophaeus
FBgn0029672	CG2875	82	30.260	ENSMAMG00000007207	noc4l	79	30.260	Mastacembelus_armatus
FBgn0029672	CG2875	75	31.026	ENSMZEG00005017749	noc4l	73	31.026	Maylandia_zebra
FBgn0029672	CG2875	63	34.395	ENSMGAG00000001901	NOC4L	85	34.395	Meleagris_gallopavo
FBgn0029672	CG2875	73	32.353	ENSMAUG00000018153	Noc4l	72	32.353	Mesocricetus_auratus
FBgn0029672	CG2875	73	33.156	ENSMICG00000011789	NOC4L	69	33.156	Microcebus_murinus
FBgn0029672	CG2875	67	34.006	ENSMOCG00000022696	-	69	34.006	Microtus_ochrogaster
FBgn0029672	CG2875	73	33.773	ENSMOCG00000015072	-	72	33.773	Microtus_ochrogaster
FBgn0029672	CG2875	94	30.339	ENSMALG00000013174	noc4l	93	30.339	Monopterus_albus
FBgn0029672	CG2875	73	32.086	MGP_CAROLIEiJ_G0027548	Noc4l	72	32.086	Mus_caroli
FBgn0029672	CG2875	73	32.353	ENSMUSG00000033294	Noc4l	72	32.353	Mus_musculus
FBgn0029672	CG2875	73	32.086	MGP_PahariEiJ_G0024130	Noc4l	72	32.086	Mus_pahari
FBgn0029672	CG2875	73	32.086	MGP_SPRETEiJ_G0028546	Noc4l	72	32.086	Mus_spretus
FBgn0029672	CG2875	75	31.969	ENSMPUG00000002415	NOC4L	88	31.969	Mustela_putorius_furo
FBgn0029672	CG2875	73	30.769	ENSMLUG00000028195	NOC4L	72	30.769	Myotis_lucifugus
FBgn0029672	CG2875	75	30.769	ENSNBRG00000020542	noc4l	73	30.769	Neolamprologus_brichardi
FBgn0029672	CG2875	72	31.250	ENSMEUG00000004020	NOC4L	71	31.250	Notamacropus_eugenii
FBgn0029672	CG2875	73	31.635	ENSODEG00000007796	NOC4L	73	31.635	Octodon_degus
FBgn0029672	CG2875	75	30.591	ENSONIG00000003800	noc4l	73	30.591	Oreochromis_niloticus
FBgn0029672	CG2875	78	30.562	ENSOANG00000007306	NOC4L	94	30.562	Ornithorhynchus_anatinus
FBgn0029672	CG2875	78	31.111	ENSORLG00000010804	noc4l	75	31.111	Oryzias_latipes
FBgn0029672	CG2875	78	31.358	ENSORLG00020000286	noc4l	75	31.358	Oryzias_latipes_hni
FBgn0029672	CG2875	75	30.513	ENSOMEG00000022646	noc4l	72	30.513	Oryzias_melastigma
FBgn0029672	CG2875	73	34.043	ENSOGAG00000001727	NOC4L	71	34.043	Otolemur_garnettii
FBgn0029672	CG2875	73	34.133	ENSOARG00000011688	NOC4L	68	34.133	Ovis_aries
FBgn0029672	CG2875	73	30.851	ENSPPAG00000042504	NOC4L	74	31.117	Pan_paniscus
FBgn0029672	CG2875	73	32.979	ENSPPRG00000014742	NOC4L	72	32.979	Panthera_pardus
FBgn0029672	CG2875	73	31.383	ENSPTRG00000050596	NOC4L	72	31.649	Pan_troglodytes
FBgn0029672	CG2875	73	31.467	ENSPANG00000011004	NOC4L	72	31.915	Papio_anubis
FBgn0029672	CG2875	84	30.023	ENSPKIG00000017628	noc4l	81	30.023	Paramormyrops_kingsleyae
FBgn0029672	CG2875	77	32.323	ENSPSIG00000007614	NOC4L	92	32.323	Pelodiscus_sinensis
FBgn0029672	CG2875	73	33.957	ENSPEMG00000011021	Noc4l	72	33.957	Peromyscus_maniculatus_bairdii
FBgn0029672	CG2875	76	32.481	ENSPCIG00000004756	NOC4L	77	32.481	Phascolarctos_cinereus
FBgn0029672	CG2875	54	37.868	ENSPFOG00000019666	noc4l	51	37.868	Poecilia_formosa
FBgn0029672	CG2875	73	34.043	ENSPCAG00000009845	NOC4L	72	34.043	Procavia_capensis
FBgn0029672	CG2875	73	32.447	ENSPCOG00000020675	NOC4L	72	32.447	Propithecus_coquereli
FBgn0029672	CG2875	57	35.336	ENSPVAG00000000458	NOC4L	54	35.336	Pteropus_vampyrus
FBgn0029672	CG2875	75	31.026	ENSPNYG00000013588	noc4l	73	31.026	Pundamilia_nyererei
FBgn0029672	CG2875	82	30.496	ENSPNAG00000025632	noc4l	80	30.496	Pygocentrus_nattereri
FBgn0029672	CG2875	85	30.088	ENSRNOG00000037478	Noc4l	87	30.088	Rattus_norvegicus
FBgn0029672	CG2875	73	31.117	ENSRBIG00000037584	NOC4L	72	31.383	Rhinopithecus_bieti
FBgn0029672	CG2875	73	30.851	ENSRROG00000033324	NOC4L	72	31.117	Rhinopithecus_roxellana
FBgn0029672	CG2875	68	32.194	ENSSBOG00000031768	NOC4L	75	32.194	Saimiri_boliviensis_boliviensis
FBgn0029672	CG2875	78	31.605	ENSSHAG00000011598	NOC4L	84	31.605	Sarcophilus_harrisii
FBgn0029672	CG2875	84	30.377	ENSSMAG00000019065	noc4l	85	30.377	Scophthalmus_maximus
FBgn0029672	CG2875	95	30.040	ENSSLDG00000022859	noc4l	94	30.040	Seriola_lalandi_dorsalis
FBgn0029672	CG2875	77	34.837	ENSSPUG00000009730	NOC4L	76	34.837	Sphenodon_punctatus
FBgn0029672	CG2875	73	34.043	ENSSSCG00000009739	NOC4L	85	34.043	Sus_scrofa
FBgn0029672	CG2875	78	31.343	ENSTGUG00000008115	-	78	31.343	Taeniopygia_guttata
FBgn0029672	CG2875	50	42.972	ENSTGUG00000017015	-	98	42.972	Taeniopygia_guttata
FBgn0029672	CG2875	73	33.952	ENSUAMG00000001296	NOC4L	74	33.244	Ursus_americanus
FBgn0029672	CG2875	73	33.952	ENSUMAG00000002643	NOC4L	74	33.952	Ursus_maritimus
FBgn0029672	CG2875	91	31.183	ENSVVUG00000004449	NOC4L	91	31.183	Vulpes_vulpes
FBgn0029672	CG2875	76	33.081	ENSXETG00000002043	noc4l	75	33.081	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005730	nucleolus	21873635.	IBA	Component
GO:0030692	Noc4p-Nop14p complex	21873635.	IBA	Component
GO:0032040	small-subunit processome	21873635.	IBA	Component
GO:0042254	ribosome biogenesis	-	IEA	Process