EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0029714 (Gene tree)
Gene ID: 31387
Gene Symbol: CG3527
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Plus strand
Length: 1034 bases
Position: chrX:4551973-4553006
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0070646	EMG1	PF03587.14	5.3e-84	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0070678	-	970	-	FBpp0070646	252 (aa)	-	Q9W4J5

Gene Model

Click here to download FBgn0029714's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0029714's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0029714	CG3527	84	63.679	ENSG00000126749	EMG1	99	50.485	Homo_sapiens
FBgn0029714	CG3527	89	61.161	ENSAPOG00000023213	emg1	91	61.161	Acanthochromis_polyacanthus
FBgn0029714	CG3527	94	58.333	ENSAMEG00000013753	EMG1	95	58.333	Ailuropoda_melanoleuca
FBgn0029714	CG3527	89	62.054	ENSACIG00000011786	emg1	91	62.054	Amphilophus_citrinellus
FBgn0029714	CG3527	89	61.778	ENSAOCG00000006520	emg1	88	61.778	Amphiprion_ocellaris
FBgn0029714	CG3527	89	61.778	ENSAPEG00000011094	emg1	88	61.778	Amphiprion_percula
FBgn0029714	CG3527	89	63.556	ENSATEG00000021642	emg1	91	63.556	Anabas_testudineus
FBgn0029714	CG3527	78	62.437	ENSAPLG00000005308	EMG1	100	62.437	Anas_platyrhynchos
FBgn0029714	CG3527	85	64.651	ENSACAG00000007210	EMG1	90	64.651	Anolis_carolinensis
FBgn0029714	CG3527	84	58.019	ENSANAG00000029536	-	83	58.019	Aotus_nancymaae
FBgn0029714	CG3527	84	62.911	ENSANAG00000022855	-	84	62.911	Aotus_nancymaae
FBgn0029714	CG3527	89	61.161	ENSACLG00000023688	emg1	91	61.161	Astatotilapia_calliptera
FBgn0029714	CG3527	89	62.054	ENSAMXG00000018994	emg1	91	62.054	Astyanax_mexicanus
FBgn0029714	CG3527	94	58.333	ENSBTAG00000013126	EMG1	67	58.333	Bos_taurus
FBgn0029714	CG3527	85	51.643	WBGene00012652	Y39A1A.14	90	51.643	Caenorhabditis_elegans
FBgn0029714	CG3527	84	63.208	ENSCJAG00000007120	EMG1	84	63.208	Callithrix_jacchus
FBgn0029714	CG3527	94	58.750	ENSCAFG00000014424	EMG1	95	58.750	Canis_familiaris
FBgn0029714	CG3527	94	58.750	ENSCAFG00020003127	EMG1	95	58.750	Canis_lupus_dingo
FBgn0029714	CG3527	94	58.750	ENSCHIG00000003188	EMG1	95	58.750	Capra_hircus
FBgn0029714	CG3527	63	59.119	ENSTSYG00000035847	EMG1	100	59.119	Carlito_syrichta
FBgn0029714	CG3527	63	61.006	ENSCAPG00000011212	EMG1	100	61.006	Cavia_aperea
FBgn0029714	CG3527	94	58.333	ENSCPOG00000025388	EMG1	95	58.333	Cavia_porcellus
FBgn0029714	CG3527	84	63.208	ENSCCAG00000033309	-	84	63.208	Cebus_capucinus
FBgn0029714	CG3527	61	45.455	ENSCCAG00000034889	-	85	45.455	Cebus_capucinus
FBgn0029714	CG3527	63	45.000	ENSCCAG00000024274	-	100	45.000	Cebus_capucinus
FBgn0029714	CG3527	84	63.208	ENSCATG00000016750	EMG1	84	63.208	Cercocebus_atys
FBgn0029714	CG3527	84	61.792	ENSCLAG00000015067	EMG1	84	61.792	Chinchilla_lanigera
FBgn0029714	CG3527	84	63.208	ENSCSAG00000010140	EMG1	84	63.208	Chlorocebus_sabaeus
FBgn0029714	CG3527	94	58.750	ENSCHOG00000002886	EMG1	95	58.750	Choloepus_hoffmanni
FBgn0029714	CG3527	71	61.798	ENSCPBG00000005167	EMG1	59	61.798	Chrysemys_picta_bellii
FBgn0029714	CG3527	97	57.551	ENSCING00000022202	-	99	57.551	Ciona_intestinalis
FBgn0029714	CG3527	97	58.197	ENSCSAVG00000005612	-	99	58.197	Ciona_savignyi
FBgn0029714	CG3527	100	56.250	ENSCANG00000043101	-	100	56.250	Colobus_angolensis_palliatus
FBgn0029714	CG3527	84	54.717	ENSCANG00000042498	-	100	56.757	Colobus_angolensis_palliatus
FBgn0029714	CG3527	96	58.704	ENSCGRG00001018228	Emg1	96	58.704	Cricetulus_griseus_chok1gshd
FBgn0029714	CG3527	96	58.704	ENSCGRG00000018238	Emg1	96	58.704	Cricetulus_griseus_crigri
FBgn0029714	CG3527	89	60.793	ENSCSEG00000020136	emg1	91	60.793	Cynoglossus_semilaevis
FBgn0029714	CG3527	87	64.384	ENSCVAG00000001164	emg1	89	64.384	Cyprinodon_variegatus
FBgn0029714	CG3527	89	64.732	ENSDARG00000056914	emg1	91	64.732	Danio_rerio
FBgn0029714	CG3527	84	62.736	ENSDNOG00000005533	EMG1	95	58.091	Dasypus_novemcinctus
FBgn0029714	CG3527	79	60.101	ENSDORG00000009795	Emg1	81	60.101	Dipodomys_ordii
FBgn0029714	CG3527	63	41.509	ENSETEG00000009111	-	99	41.509	Echinops_telfairi
FBgn0029714	CG3527	84	61.792	ENSEBUG00000008287	emg1	80	61.792	Eptatretus_burgeri
FBgn0029714	CG3527	94	58.333	ENSEASG00005016018	EMG1	95	58.333	Equus_asinus_asinus
FBgn0029714	CG3527	94	58.750	ENSECAG00000022412	EMG1	95	58.750	Equus_caballus
FBgn0029714	CG3527	94	59.167	ENSEEUG00000000065	EMG1	95	59.167	Erinaceus_europaeus
FBgn0029714	CG3527	84	63.679	ENSFCAG00000004288	EMG1	84	63.679	Felis_catus
FBgn0029714	CG3527	92	60.776	ENSFALG00000004617	EMG1	99	57.371	Ficedula_albicollis
FBgn0029714	CG3527	84	62.264	ENSFDAG00000011086	EMG1	84	62.264	Fukomys_damarensis
FBgn0029714	CG3527	89	60.268	ENSGMOG00000011025	emg1	89	60.268	Gadus_morhua
FBgn0029714	CG3527	85	62.911	ENSGALG00000014568	EMG1	89	62.911	Gallus_gallus
FBgn0029714	CG3527	85	64.953	ENSGAFG00000014143	emg1	87	64.953	Gambusia_affinis
FBgn0029714	CG3527	99	57.769	ENSGACG00000010330	emg1	98	57.769	Gasterosteus_aculeatus
FBgn0029714	CG3527	78	62.944	ENSGAGG00000005641	EMG1	100	63.522	Gopherus_agassizii
FBgn0029714	CG3527	84	62.736	ENSGGOG00000004287	EMG1	84	62.736	Gorilla_gorilla
FBgn0029714	CG3527	89	61.161	ENSHBUG00000014862	emg1	91	61.161	Haplochromis_burtoni
FBgn0029714	CG3527	96	56.735	ENSHGLG00000001300	EMG1	96	56.735	Heterocephalus_glaber_female
FBgn0029714	CG3527	96	56.735	ENSHGLG00100011644	EMG1	96	56.735	Heterocephalus_glaber_male
FBgn0029714	CG3527	89	61.607	ENSHCOG00000017870	emg1	91	61.607	Hippocampus_comes
FBgn0029714	CG3527	89	64.286	ENSIPUG00000008261	emg1	91	64.286	Ictalurus_punctatus
FBgn0029714	CG3527	84	62.736	ENSSTOG00000000387	EMG1	84	62.736	Ictidomys_tridecemlineatus
FBgn0029714	CG3527	84	62.736	ENSJJAG00000018448	Emg1	83	62.736	Jaculus_jaculus
FBgn0029714	CG3527	87	64.545	ENSKMAG00000007069	emg1	88	64.545	Kryptolebias_marmoratus
FBgn0029714	CG3527	89	60.714	ENSLBEG00000007424	emg1	91	60.714	Labrus_bergylta
FBgn0029714	CG3527	96	59.756	ENSLOCG00000008451	emg1	97	59.756	Lepisosteus_oculatus
FBgn0029714	CG3527	94	58.333	ENSLAFG00000001314	EMG1	95	58.333	Loxodonta_africana
FBgn0029714	CG3527	84	63.208	ENSMFAG00000037142	EMG1	84	63.208	Macaca_fascicularis
FBgn0029714	CG3527	84	63.208	ENSMMUG00000010207	EMG1	84	63.208	Macaca_mulatta
FBgn0029714	CG3527	84	63.208	ENSMNEG00000040907	EMG1	84	63.208	Macaca_nemestrina
FBgn0029714	CG3527	84	63.208	ENSMLEG00000026029	EMG1	84	63.208	Mandrillus_leucophaeus
FBgn0029714	CG3527	89	63.111	ENSMAMG00000001888	emg1	91	63.111	Mastacembelus_armatus
FBgn0029714	CG3527	89	61.161	ENSMZEG00005017546	emg1	91	61.161	Maylandia_zebra
FBgn0029714	CG3527	85	62.441	ENSMGAG00000014145	EMG1	85	62.441	Meleagris_gallopavo
FBgn0029714	CG3527	91	60.684	ENSMAUG00000011093	Emg1	93	60.684	Mesocricetus_auratus
FBgn0029714	CG3527	94	59.167	ENSMICG00000001790	EMG1	95	59.167	Microcebus_murinus
FBgn0029714	CG3527	96	57.202	ENSMOCG00000022570	Emg1	96	57.202	Microtus_ochrogaster
FBgn0029714	CG3527	89	62.500	ENSMMOG00000016090	emg1	91	62.500	Mola_mola
FBgn0029714	CG3527	84	60.849	ENSMODG00000018161	EMG1	98	54.297	Monodelphis_domestica
FBgn0029714	CG3527	89	62.500	ENSMALG00000022477	emg1	91	62.500	Monopterus_albus
FBgn0029714	CG3527	96	58.300	MGP_CAROLIEiJ_G0028844	Emg1	96	58.300	Mus_caroli
FBgn0029714	CG3527	94	59.583	ENSMUSG00000004268	Emg1	95	59.583	Mus_musculus
FBgn0029714	CG3527	84	64.151	MGP_PahariEiJ_G0022605	Emg1	84	64.151	Mus_pahari
FBgn0029714	CG3527	84	63.679	MGP_SPRETEiJ_G0029886	Emg1	84	63.679	Mus_spretus
FBgn0029714	CG3527	94	58.333	ENSMPUG00000016763	EMG1	95	58.333	Mustela_putorius_furo
FBgn0029714	CG3527	94	58.264	ENSMLUG00000009196	EMG1	95	58.264	Myotis_lucifugus
FBgn0029714	CG3527	84	62.736	ENSNGAG00000022592	Emg1	85	62.736	Nannospalax_galili
FBgn0029714	CG3527	89	61.161	ENSNBRG00000001192	emg1	91	61.161	Neolamprologus_brichardi
FBgn0029714	CG3527	84	63.208	ENSNLEG00000005080	EMG1	84	63.208	Nomascus_leucogenys
FBgn0029714	CG3527	87	58.559	ENSMEUG00000000831	EMG1	95	58.559	Notamacropus_eugenii
FBgn0029714	CG3527	58	60.131	ENSOPRG00000004071	-	97	60.131	Ochotona_princeps
FBgn0029714	CG3527	78	62.245	ENSOPRG00000016878	-	100	62.245	Ochotona_princeps
FBgn0029714	CG3527	84	61.321	ENSODEG00000004059	EMG1	84	61.321	Octodon_degus
FBgn0029714	CG3527	89	61.161	ENSONIG00000012893	emg1	90	61.161	Oreochromis_niloticus
FBgn0029714	CG3527	93	57.741	ENSOCUG00000003603	EMG1	95	57.741	Oryctolagus_cuniculus
FBgn0029714	CG3527	89	62.946	ENSORLG00000012146	emg1	88	62.946	Oryzias_latipes
FBgn0029714	CG3527	89	62.946	ENSORLG00020005499	emg1	91	62.946	Oryzias_latipes_hni
FBgn0029714	CG3527	89	62.946	ENSORLG00015011535	emg1	91	62.946	Oryzias_latipes_hsok
FBgn0029714	CG3527	89	63.393	ENSOMEG00000012687	emg1	91	63.393	Oryzias_melastigma
FBgn0029714	CG3527	91	60.256	ENSOGAG00000006975	EMG1	93	60.256	Otolemur_garnettii
FBgn0029714	CG3527	94	58.678	ENSOARG00000004923	EMG1	95	58.678	Ovis_aries
FBgn0029714	CG3527	84	63.679	ENSPPAG00000033046	EMG1	84	63.679	Pan_paniscus
FBgn0029714	CG3527	84	63.208	ENSPPRG00000012350	EMG1	84	63.208	Panthera_pardus
FBgn0029714	CG3527	84	63.208	ENSPTIG00000000358	EMG1	84	63.208	Panthera_tigris_altaica
FBgn0029714	CG3527	84	63.679	ENSPTRG00000048050	EMG1	84	63.679	Pan_troglodytes
FBgn0029714	CG3527	84	62.736	ENSPANG00000005523	-	84	62.736	Papio_anubis
FBgn0029714	CG3527	84	63.208	ENSPANG00000019398	-	84	63.208	Papio_anubis
FBgn0029714	CG3527	89	62.996	ENSPKIG00000025303	emg1	91	63.111	Paramormyrops_kingsleyae
FBgn0029714	CG3527	85	61.860	ENSPSIG00000011094	EMG1	89	61.860	Pelodiscus_sinensis
FBgn0029714	CG3527	89	61.161	ENSPMGG00000019918	emg1	91	61.161	Periophthalmus_magnuspinnatus
FBgn0029714	CG3527	96	58.300	ENSPEMG00000010244	Emg1	96	58.300	Peromyscus_maniculatus_bairdii
FBgn0029714	CG3527	84	61.792	ENSPCIG00000002814	EMG1	95	57.917	Phascolarctos_cinereus
FBgn0029714	CG3527	87	63.470	ENSPFOG00000013034	emg1	89	63.470	Poecilia_formosa
FBgn0029714	CG3527	87	63.470	ENSPLAG00000000125	emg1	89	63.470	Poecilia_latipinna
FBgn0029714	CG3527	87	63.927	ENSPMEG00000016802	emg1	89	63.927	Poecilia_mexicana
FBgn0029714	CG3527	87	63.014	ENSPREG00000010409	emg1	73	63.014	Poecilia_reticulata
FBgn0029714	CG3527	84	63.679	ENSPPYG00000004215	EMG1	84	63.679	Pongo_abelii
FBgn0029714	CG3527	84	53.302	ENSPCAG00000012368	EMG1	81	53.302	Procavia_capensis
FBgn0029714	CG3527	94	58.750	ENSPCOG00000028560	EMG1	95	58.750	Propithecus_coquereli
FBgn0029714	CG3527	94	58.750	ENSPVAG00000006030	EMG1	95	58.750	Pteropus_vampyrus
FBgn0029714	CG3527	89	61.161	ENSPNYG00000023172	emg1	91	61.161	Pundamilia_nyererei
FBgn0029714	CG3527	99	57.371	ENSPNAG00000019953	emg1	98	57.371	Pygocentrus_nattereri
FBgn0029714	CG3527	96	58.704	ENSRNOG00000012828	Emg1	96	58.704	Rattus_norvegicus
FBgn0029714	CG3527	84	63.679	ENSRBIG00000031315	EMG1	84	63.679	Rhinopithecus_bieti
FBgn0029714	CG3527	84	63.679	ENSRROG00000032961	EMG1	84	63.679	Rhinopithecus_roxellana
FBgn0029714	CG3527	84	48.636	YLR186W	EMG1	85	48.636	Saccharomyces_cerevisiae
FBgn0029714	CG3527	94	59.072	ENSSBOG00000029143	-	94	59.072	Saimiri_boliviensis_boliviensis
FBgn0029714	CG3527	84	47.393	ENSSBOG00000022895	-	81	47.393	Saimiri_boliviensis_boliviensis
FBgn0029714	CG3527	84	60.849	ENSSHAG00000016428	EMG1	95	56.667	Sarcophilus_harrisii
FBgn0029714	CG3527	89	63.877	ENSSFOG00015002421	emg1	91	63.877	Scleropages_formosus
FBgn0029714	CG3527	89	61.161	ENSSMAG00000011806	emg1	91	61.161	Scophthalmus_maximus
FBgn0029714	CG3527	99	57.769	ENSSDUG00000011345	emg1	96	57.769	Seriola_dumerili
FBgn0029714	CG3527	99	57.769	ENSSLDG00000023439	emg1	96	57.769	Seriola_lalandi_dorsalis
FBgn0029714	CG3527	84	50.943	ENSSARG00000002227	EMG1	84	50.943	Sorex_araneus
FBgn0029714	CG3527	85	63.721	ENSSPUG00000014446	EMG1	88	63.721	Sphenodon_punctatus
FBgn0029714	CG3527	88	63.393	ENSSPAG00000005460	emg1	91	63.393	Stegastes_partitus
FBgn0029714	CG3527	94	59.167	ENSSSCG00000026812	EMG1	95	59.167	Sus_scrofa
FBgn0029714	CG3527	85	64.319	ENSTGUG00000013271	EMG1	99	64.319	Taeniopygia_guttata
FBgn0029714	CG3527	89	62.500	ENSTRUG00000001906	emg1	91	62.500	Takifugu_rubripes
FBgn0029714	CG3527	89	61.607	ENSTNIG00000008047	emg1	89	61.607	Tetraodon_nigroviridis
FBgn0029714	CG3527	84	63.208	ENSTBEG00000015406	EMG1	98	63.208	Tupaia_belangeri
FBgn0029714	CG3527	94	50.833	ENSTTRG00000004810	EMG1	95	50.833	Tursiops_truncatus
FBgn0029714	CG3527	94	58.333	ENSUAMG00000026959	EMG1	95	58.333	Ursus_americanus
FBgn0029714	CG3527	84	62.736	ENSUMAG00000003248	EMG1	84	62.736	Ursus_maritimus
FBgn0029714	CG3527	84	62.736	ENSVVUG00000010807	EMG1	95	58.750	Vulpes_vulpes
FBgn0029714	CG3527	84	66.038	ENSXETG00000023917	emg1	99	66.038	Xenopus_tropicalis
FBgn0029714	CG3527	85	64.319	ENSXMAG00000011508	emg1	86	64.319	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005730	nucleolus	21873635.	IBA	Component
GO:0019843	rRNA binding	21873635.	IBA	Function
GO:0031167	rRNA methylation	-	ISS	Process
GO:0032040	small-subunit processome	21873635.	IBA	Component
GO:0042742	defense response to bacterium	18245331.	IMP	Process
GO:0070037	rRNA (pseudouridine) methyltransferase activity	21873635.	IBA	Function
GO:0070037	rRNA (pseudouridine) methyltransferase activity	-	ISS	Function
GO:0070475	rRNA base methylation	21873635.	IBA	Process