EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0030007 (Gene tree)
Gene ID: 31740
Gene Symbol: alpha-PheRS
Alias: -
Full Name: Phenylalanyl-tRNA synthetase%2C alpha-subunit
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: confidence
Strand: Minus strand
Length: 1699 bases
Position: chrX:8143904-8145602
Accession: FBgn0030007
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0071138	tRNA-synt_2d	PF01409.20	9.8e-89	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27378189	Global changes of the RNA bound proteome during the maternal-to-zygotic transition in Drosophila	IC & embryos.MZT	2016 Jul 5	Sysoev VO	DOI: 10.1038/ncomms12128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0071190	-	1699	-	FBpp0071138	498 (aa)	-	Q9W3J5

Gene Model

Click here to download FBgn0030007's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0030007's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0030007	alpha-PheRS	99	62.753	ENSG00000179115	FARSA	97	62.753	Homo_sapiens
FBgn0030007	alpha-PheRS	99	65.992	ENSAPOG00000011465	farsa	99	65.992	Acanthochromis_polyacanthus
FBgn0030007	alpha-PheRS	99	62.753	ENSAMEG00000012446	FARSA	97	62.753	Ailuropoda_melanoleuca
FBgn0030007	alpha-PheRS	99	61.538	ENSACIG00000020499	farsa	99	61.538	Amphilophus_citrinellus
FBgn0030007	alpha-PheRS	99	66.397	ENSAOCG00000000581	farsa	99	66.397	Amphiprion_ocellaris
FBgn0030007	alpha-PheRS	99	66.397	ENSAPEG00000017695	farsa	99	66.397	Amphiprion_percula
FBgn0030007	alpha-PheRS	99	56.478	ENSATEG00000012633	farsa	99	56.478	Anabas_testudineus
FBgn0030007	alpha-PheRS	99	60.526	ENSATEG00000012807	farsa	99	60.526	Anabas_testudineus
FBgn0030007	alpha-PheRS	96	65.618	ENSACAG00000017166	FARSA	80	65.618	Anolis_carolinensis
FBgn0030007	alpha-PheRS	99	62.955	ENSANAG00000037420	FARSA	97	62.955	Aotus_nancymaae
FBgn0030007	alpha-PheRS	98	66.260	ENSACLG00000001716	farsa	98	66.260	Astatotilapia_calliptera
FBgn0030007	alpha-PheRS	99	65.587	ENSAMXG00000037912	farsa	99	65.587	Astyanax_mexicanus
FBgn0030007	alpha-PheRS	99	62.551	ENSBTAG00000021374	FARSA	97	62.551	Bos_taurus
FBgn0030007	alpha-PheRS	99	60.446	WBGene00001497	fars-1	98	60.446	Caenorhabditis_elegans
FBgn0030007	alpha-PheRS	99	63.179	ENSCJAG00000004686	FARSA	96	60.931	Callithrix_jacchus
FBgn0030007	alpha-PheRS	99	62.955	ENSCAFG00000017096	FARSA	97	62.955	Canis_familiaris
FBgn0030007	alpha-PheRS	99	62.955	ENSCAFG00020005315	FARSA	97	62.955	Canis_lupus_dingo
FBgn0030007	alpha-PheRS	99	59.432	ENSCHIG00000022617	FARSA	97	59.432	Capra_hircus
FBgn0030007	alpha-PheRS	92	62.391	ENSTSYG00000002595	FARSA	83	62.391	Carlito_syrichta
FBgn0030007	alpha-PheRS	91	62.939	ENSCAPG00000011353	FARSA	95	63.556	Cavia_aperea
FBgn0030007	alpha-PheRS	99	61.538	ENSCPOG00000000787	FARSA	97	61.538	Cavia_porcellus
FBgn0030007	alpha-PheRS	99	62.955	ENSCCAG00000028176	FARSA	97	62.955	Cebus_capucinus
FBgn0030007	alpha-PheRS	99	61.538	ENSCLAG00000015489	FARSA	97	61.538	Chinchilla_lanigera
FBgn0030007	alpha-PheRS	94	64.668	ENSCSAG00000006530	FARSA	97	64.668	Chlorocebus_sabaeus
FBgn0030007	alpha-PheRS	96	67.086	ENSCPBG00000023915	FARSA	98	65.795	Chrysemys_picta_bellii
FBgn0030007	alpha-PheRS	99	62.677	ENSCING00000002567	-	99	62.677	Ciona_intestinalis
FBgn0030007	alpha-PheRS	99	62.551	ENSCSAVG00000010683	-	98	62.551	Ciona_savignyi
FBgn0030007	alpha-PheRS	99	62.955	ENSCANG00000043649	-	97	62.955	Colobus_angolensis_palliatus
FBgn0030007	alpha-PheRS	96	63.389	ENSCGRG00001019769	Farsa	96	62.602	Cricetulus_griseus_chok1gshd
FBgn0030007	alpha-PheRS	96	63.389	ENSCGRG00000013415	Farsa	96	62.602	Cricetulus_griseus_crigri
FBgn0030007	alpha-PheRS	99	65.587	ENSCSEG00000016214	farsa	95	65.587	Cynoglossus_semilaevis
FBgn0030007	alpha-PheRS	99	65.789	ENSCVAG00000007907	farsa	99	65.789	Cyprinodon_variegatus
FBgn0030007	alpha-PheRS	99	66.599	ENSDARG00000098825	farsa	99	66.599	Danio_rerio
FBgn0030007	alpha-PheRS	96	63.180	ENSDNOG00000032350	FARSA	97	63.180	Dasypus_novemcinctus
FBgn0030007	alpha-PheRS	99	62.348	ENSDORG00000010118	Farsa	97	62.348	Dipodomys_ordii
FBgn0030007	alpha-PheRS	99	55.354	ENSETEG00000018673	FARSA	97	55.354	Echinops_telfairi
FBgn0030007	alpha-PheRS	58	58.362	ENSEBUG00000008545	farsa	97	58.362	Eptatretus_burgeri
FBgn0030007	alpha-PheRS	91	54.198	ENSEASG00005004093	FARSA	93	54.198	Equus_asinus_asinus
FBgn0030007	alpha-PheRS	98	63.061	ENSECAG00000015139	FARSA	91	63.061	Equus_caballus
FBgn0030007	alpha-PheRS	99	65.385	ENSELUG00000010183	farsa	98	67.406	Esox_lucius
FBgn0030007	alpha-PheRS	99	62.955	ENSFCAG00000023511	FARSA	97	62.955	Felis_catus
FBgn0030007	alpha-PheRS	99	61.943	ENSFDAG00000005987	FARSA	97	61.943	Fukomys_damarensis
FBgn0030007	alpha-PheRS	98	66.463	ENSFHEG00000009382	farsa	93	66.463	Fundulus_heteroclitus
FBgn0030007	alpha-PheRS	97	65.979	ENSGMOG00000018319	farsa	97	65.979	Gadus_morhua
FBgn0030007	alpha-PheRS	99	61.753	ENSGALG00000040258	FARSA	88	61.753	Gallus_gallus
FBgn0030007	alpha-PheRS	99	65.789	ENSGAFG00000014146	farsa	99	65.789	Gambusia_affinis
FBgn0030007	alpha-PheRS	99	65.051	ENSGACG00000006278	farsa	99	65.051	Gasterosteus_aculeatus
FBgn0030007	alpha-PheRS	99	66.197	ENSGAGG00000000753	FARSA	98	65.795	Gopherus_agassizii
FBgn0030007	alpha-PheRS	99	62.753	ENSGGOG00000003418	FARSA	97	62.753	Gorilla_gorilla
FBgn0030007	alpha-PheRS	98	66.260	ENSHBUG00000019852	farsa	98	66.260	Haplochromis_burtoni
FBgn0030007	alpha-PheRS	99	61.538	ENSHGLG00000005213	FARSA	97	61.538	Heterocephalus_glaber_female
FBgn0030007	alpha-PheRS	99	61.741	ENSHGLG00100009586	FARSA	97	61.741	Heterocephalus_glaber_male
FBgn0030007	alpha-PheRS	99	63.968	ENSHCOG00000019548	farsa	99	63.968	Hippocampus_comes
FBgn0030007	alpha-PheRS	99	67.004	ENSIPUG00000007635	farsa	99	67.004	Ictalurus_punctatus
FBgn0030007	alpha-PheRS	99	61.943	ENSSTOG00000008748	FARSA	97	61.943	Ictidomys_tridecemlineatus
FBgn0030007	alpha-PheRS	99	64.575	ENSKMAG00000010698	farsa	99	64.575	Kryptolebias_marmoratus
FBgn0030007	alpha-PheRS	99	65.789	ENSLBEG00000006757	-	99	65.789	Labrus_bergylta
FBgn0030007	alpha-PheRS	85	61.972	ENSLBEG00000001258	farsa	97	61.972	Labrus_bergylta
FBgn0030007	alpha-PheRS	92	63.341	ENSLOCG00000008389	farsa	95	63.341	Lepisosteus_oculatus
FBgn0030007	alpha-PheRS	99	62.146	ENSLAFG00000016154	FARSA	97	62.146	Loxodonta_africana
FBgn0030007	alpha-PheRS	99	62.955	ENSMFAG00000030595	FARSA	97	62.955	Macaca_fascicularis
FBgn0030007	alpha-PheRS	99	62.955	ENSMMUG00000004390	FARSA	97	62.955	Macaca_mulatta
FBgn0030007	alpha-PheRS	99	62.955	ENSMNEG00000043866	FARSA	97	62.955	Macaca_nemestrina
FBgn0030007	alpha-PheRS	99	62.828	ENSMLEG00000029157	FARSA	97	62.828	Mandrillus_leucophaeus
FBgn0030007	alpha-PheRS	99	65.789	ENSMAMG00000010636	farsa	99	65.789	Mastacembelus_armatus
FBgn0030007	alpha-PheRS	98	66.260	ENSMZEG00005002319	farsa	98	66.260	Maylandia_zebra
FBgn0030007	alpha-PheRS	96	63.808	ENSMAUG00000009188	Farsa	96	63.008	Mesocricetus_auratus
FBgn0030007	alpha-PheRS	99	62.955	ENSMICG00000016272	FARSA	97	62.955	Microcebus_murinus
FBgn0030007	alpha-PheRS	96	63.180	ENSMOCG00000011399	Farsa	96	62.398	Microtus_ochrogaster
FBgn0030007	alpha-PheRS	99	61.538	ENSMMOG00000006287	farsa	99	61.538	Mola_mola
FBgn0030007	alpha-PheRS	98	63.061	ENSMODG00000011519	FARSA	98	63.061	Monodelphis_domestica
FBgn0030007	alpha-PheRS	90	66.519	ENSMALG00000001972	farsa	95	66.519	Monopterus_albus
FBgn0030007	alpha-PheRS	96	63.808	MGP_CAROLIEiJ_G0031312	Farsa	97	62.753	Mus_caroli
FBgn0030007	alpha-PheRS	96	63.598	ENSMUSG00000003808	Farsa	96	62.805	Mus_musculus
FBgn0030007	alpha-PheRS	96	63.598	MGP_PahariEiJ_G0022917	Farsa	97	62.753	Mus_pahari
FBgn0030007	alpha-PheRS	96	63.808	MGP_SPRETEiJ_G0032431	Farsa	96	63.008	Mus_spretus
FBgn0030007	alpha-PheRS	99	63.158	ENSMPUG00000004400	FARSA	97	63.158	Mustela_putorius_furo
FBgn0030007	alpha-PheRS	99	63.158	ENSMLUG00000012767	FARSA	97	63.158	Myotis_lucifugus
FBgn0030007	alpha-PheRS	73	67.213	ENSNGAG00000018353	Farsa	99	67.213	Nannospalax_galili
FBgn0030007	alpha-PheRS	98	65.854	ENSNBRG00000010063	farsa	98	65.854	Neolamprologus_brichardi
FBgn0030007	alpha-PheRS	99	62.753	ENSNLEG00000012899	FARSA	97	62.753	Nomascus_leucogenys
FBgn0030007	alpha-PheRS	98	63.395	ENSMEUG00000014253	FARSA	98	63.395	Notamacropus_eugenii
FBgn0030007	alpha-PheRS	99	62.348	ENSOPRG00000005004	FARSA	97	62.348	Ochotona_princeps
FBgn0030007	alpha-PheRS	99	61.134	ENSODEG00000010433	FARSA	97	61.134	Octodon_degus
FBgn0030007	alpha-PheRS	98	66.463	ENSONIG00000008075	farsa	98	66.463	Oreochromis_niloticus
FBgn0030007	alpha-PheRS	98	66.870	ENSORLG00000016406	farsa	89	66.870	Oryzias_latipes
FBgn0030007	alpha-PheRS	98	66.870	ENSORLG00020021978	farsa	98	66.870	Oryzias_latipes_hni
FBgn0030007	alpha-PheRS	99	66.329	ENSORLG00015015045	farsa	99	66.191	Oryzias_latipes_hsok
FBgn0030007	alpha-PheRS	99	66.126	ENSOMEG00000017367	farsa	96	66.260	Oryzias_melastigma
FBgn0030007	alpha-PheRS	99	63.158	ENSOGAG00000012243	FARSA	97	63.158	Otolemur_garnettii
FBgn0030007	alpha-PheRS	99	62.551	ENSOARG00000009991	FARSA	91	62.551	Ovis_aries
FBgn0030007	alpha-PheRS	99	62.753	ENSPPAG00000034266	FARSA	97	62.753	Pan_paniscus
FBgn0030007	alpha-PheRS	99	62.955	ENSPPRG00000000346	FARSA	97	62.955	Panthera_pardus
FBgn0030007	alpha-PheRS	92	65.076	ENSPTIG00000011502	FARSA	94	65.076	Panthera_tigris_altaica
FBgn0030007	alpha-PheRS	99	62.753	ENSPTRG00000010550	FARSA	97	62.753	Pan_troglodytes
FBgn0030007	alpha-PheRS	99	62.753	ENSPANG00000010978	FARSA	96	60.526	Papio_anubis
FBgn0030007	alpha-PheRS	99	65.385	ENSPKIG00000007170	farsa	99	65.385	Paramormyrops_kingsleyae
FBgn0030007	alpha-PheRS	90	61.197	ENSPSIG00000012701	FARSA	97	61.197	Pelodiscus_sinensis
FBgn0030007	alpha-PheRS	99	60.729	ENSPMGG00000001401	farsa	99	60.729	Periophthalmus_magnuspinnatus
FBgn0030007	alpha-PheRS	96	63.389	ENSPEMG00000012560	Farsa	96	62.602	Peromyscus_maniculatus_bairdii
FBgn0030007	alpha-PheRS	99	65.720	ENSPMAG00000008453	farsa	99	65.720	Petromyzon_marinus
FBgn0030007	alpha-PheRS	99	63.360	ENSPCIG00000019294	FARSA	99	63.360	Phascolarctos_cinereus
FBgn0030007	alpha-PheRS	99	65.789	ENSPFOG00000001201	farsa	99	65.789	Poecilia_formosa
FBgn0030007	alpha-PheRS	99	65.789	ENSPLAG00000018191	farsa	99	65.789	Poecilia_latipinna
FBgn0030007	alpha-PheRS	99	65.789	ENSPMEG00000013547	farsa	99	65.789	Poecilia_mexicana
FBgn0030007	alpha-PheRS	99	61.538	ENSPREG00000013620	farsa	99	61.538	Poecilia_reticulata
FBgn0030007	alpha-PheRS	99	62.551	ENSPPYG00000009615	FARSA	97	62.551	Pongo_abelii
FBgn0030007	alpha-PheRS	99	62.551	ENSPCAG00000015721	FARSA	97	62.551	Procavia_capensis
FBgn0030007	alpha-PheRS	99	62.955	ENSPCOG00000014412	FARSA	97	62.955	Propithecus_coquereli
FBgn0030007	alpha-PheRS	85	76.389	ENSPVAG00000014714	FARSA	83	76.389	Pteropus_vampyrus
FBgn0030007	alpha-PheRS	98	66.260	ENSPNYG00000002144	farsa	98	66.260	Pundamilia_nyererei
FBgn0030007	alpha-PheRS	99	65.789	ENSPNAG00000000869	farsa	99	65.789	Pygocentrus_nattereri
FBgn0030007	alpha-PheRS	98	63.211	ENSRNOG00000003149	Farsa	96	63.211	Rattus_norvegicus
FBgn0030007	alpha-PheRS	99	62.955	ENSRBIG00000025585	FARSA	96	64.823	Rhinopithecus_bieti
FBgn0030007	alpha-PheRS	99	62.955	ENSRROG00000040046	FARSA	96	60.729	Rhinopithecus_roxellana
FBgn0030007	alpha-PheRS	97	49.701	YFL022C	FRS2	98	49.701	Saccharomyces_cerevisiae
FBgn0030007	alpha-PheRS	99	63.360	ENSSBOG00000031362	FARSA	97	63.360	Saimiri_boliviensis_boliviensis
FBgn0030007	alpha-PheRS	90	64.444	ENSSHAG00000015006	FARSA	100	64.444	Sarcophilus_harrisii
FBgn0030007	alpha-PheRS	99	64.777	ENSSFOG00015014864	farsa	99	64.777	Scleropages_formosus
FBgn0030007	alpha-PheRS	98	65.854	ENSSMAG00000002358	farsa	98	65.854	Scophthalmus_maximus
FBgn0030007	alpha-PheRS	99	65.385	ENSSDUG00000008631	farsa	99	65.385	Seriola_dumerili
FBgn0030007	alpha-PheRS	99	65.385	ENSSLDG00000017108	farsa	99	65.385	Seriola_lalandi_dorsalis
FBgn0030007	alpha-PheRS	66	75.758	ENSSARG00000006579	-	65	75.758	Sorex_araneus
FBgn0030007	alpha-PheRS	89	54.324	ENSSPUG00000012509	FARSA	100	53.602	Sphenodon_punctatus
FBgn0030007	alpha-PheRS	99	65.789	ENSSPAG00000018292	farsa	91	65.789	Stegastes_partitus
FBgn0030007	alpha-PheRS	98	63.008	ENSSSCG00000013745	FARSA	96	63.008	Sus_scrofa
FBgn0030007	alpha-PheRS	96	60.669	ENSTRUG00000010624	farsa	99	59.514	Takifugu_rubripes
FBgn0030007	alpha-PheRS	99	63.158	ENSTNIG00000008330	farsa	99	63.158	Tetraodon_nigroviridis
FBgn0030007	alpha-PheRS	90	61.556	ENSTBEG00000000396	FARSA	97	61.556	Tupaia_belangeri
FBgn0030007	alpha-PheRS	86	75.758	ENSTTRG00000003599	FARSA	84	75.758	Tursiops_truncatus
FBgn0030007	alpha-PheRS	99	62.753	ENSUAMG00000010230	FARSA	97	62.753	Ursus_americanus
FBgn0030007	alpha-PheRS	99	62.753	ENSUMAG00000006110	FARSA	97	62.753	Ursus_maritimus
FBgn0030007	alpha-PheRS	99	62.955	ENSVVUG00000024145	FARSA	97	62.955	Vulpes_vulpes
FBgn0030007	alpha-PheRS	99	63.030	ENSXETG00000007936	farsa	99	63.030	Xenopus_tropicalis
FBgn0030007	alpha-PheRS	99	58.384	ENSXCOG00000015512	farsa	99	58.384	Xiphophorus_couchianus
FBgn0030007	alpha-PheRS	99	65.992	ENSXMAG00000008832	farsa	99	65.992	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000049	tRNA binding	-	IEA	Function
GO:0002161	aminoacyl-tRNA editing activity	25427601.	IMP	Function
GO:0004826	phenylalanine-tRNA ligase activity	21873635.	IBA	Function
GO:0004826	phenylalanine-tRNA ligase activity	25427601.	IDA	Function
GO:0004826	phenylalanine-tRNA ligase activity	26761199.	TAS	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0005737	cytoplasm	26761199.	TAS	Component
GO:0005829	cytosol	21873635.	IBA	Component
GO:0006432	phenylalanyl-tRNA aminoacylation	21873635.	IBA	Process
GO:0006432	phenylalanyl-tRNA aminoacylation	25427601.	IDA	Process
GO:0006432	phenylalanyl-tRNA aminoacylation	25427601.	IMP	Process
GO:0006432	phenylalanyl-tRNA aminoacylation	26761199.	TAS	Process
GO:0009328	phenylalanine-tRNA ligase complex	21873635.	IBA	Component