EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0030010 (Gene tree)
Gene ID: 31743
Gene Symbol: CG10959
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Plus strand
Length: 1904 bases
Position: chrX:8148783-8150686
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0304004	zf-C2H2	PF00096.26	8.4e-31	1	6
FBpp0304004	zf-C2H2	PF00096.26	8.4e-31	2	6
FBpp0304004	zf-C2H2	PF00096.26	8.4e-31	3	6
FBpp0304004	zf-C2H2	PF00096.26	8.4e-31	4	6
FBpp0304004	zf-C2H2	PF00096.26	8.4e-31	5	6
FBpp0304004	zf-C2H2	PF00096.26	8.4e-31	6	6
FBpp0071108	zf-C2H2	PF00096.26	9.1e-31	1	6
FBpp0071108	zf-C2H2	PF00096.26	9.1e-31	2	6
FBpp0071108	zf-C2H2	PF00096.26	9.1e-31	3	6
FBpp0071108	zf-C2H2	PF00096.26	9.1e-31	4	6
FBpp0071108	zf-C2H2	PF00096.26	9.1e-31	5	6
FBpp0071108	zf-C2H2	PF00096.26	9.1e-31	6	6
FBpp0304004	zf-C2H2_jaz	PF12171.8	5.6e-09	1	1
FBpp0071108	zf-C2H2_jaz	PF12171.8	5.7e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0071157	-	1836	-	FBpp0071108	443 (aa)	-	Q9W3J2
FBtr0331614	-	1830	-	FBpp0304004	441 (aa)	-	M9PHD3

Gene Model

Click here to download FBgn0030010's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0030010's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
FBgn0030010	CG10959	55	35.185	FBgn0020309	crol	52	35.185
FBgn0030010	CG10959	50	37.860	FBgn0030012	CG18262	84	30.824
FBgn0030010	CG10959	51	35.772	FBgn0038765	CG4424	55	35.115
FBgn0030010	CG10959	52	36.310	FBgn0033934	CG17385	69	36.310
FBgn0030010	CG10959	63	30.405	FBgn0038549	CG17802	50	30.405
FBgn0030010	CG10959	90	34.459	FBgn0030008	CG2129	95	34.459
FBgn0030010	CG10959	58	30.597	FBgn0003512	Sry-delta	63	30.597
FBgn0030010	CG10959	57	36.232	FBgn0028895	CG17328	65	36.232
FBgn0030010	CG10959	55	31.132	FBgn0052772	CG32772	62	34.416
FBgn0030010	CG10959	53	31.416	FBgn0029928	CG3032	64	31.674
FBgn0030010	CG10959	52	34.078	FBgn0037120	CG11247	62	32.143
FBgn0030010	CG10959	51	31.000	FBgn0261679	CG42726	54	31.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0030010	CG10959	52	31.696	ENSCING00000004359	zf(c2h2)-145	88	31.696	Ciona_intestinalis
FBgn0030010	CG10959	52	33.333	ENSCING00000023719	zf(c2h2)-82	94	33.505	Ciona_intestinalis
FBgn0030010	CG10959	58	32.959	ENSFHEG00000000789	-	59	32.959	Fundulus_heteroclitus
FBgn0030010	CG10959	73	38.346	ENSHBUG00000004077	-	88	44.444	Haplochromis_burtoni
FBgn0030010	CG10959	65	31.023	ENSKMAG00000008319	-	91	30.859	Kryptolebias_marmoratus
FBgn0030010	CG10959	51	32.743	ENSPMGG00000015225	-	61	33.636	Periophthalmus_magnuspinnatus
FBgn0030010	CG10959	57	33.793	ENSPLAG00000015715	-	52	33.793	Poecilia_latipinna
FBgn0030010	CG10959	60	38.384	ENSPLAG00000006183	-	57	38.384	Poecilia_latipinna
FBgn0030010	CG10959	57	33.793	ENSPMEG00000017323	-	52	33.793	Poecilia_mexicana
FBgn0030010	CG10959	58	38.384	ENSPMEG00000014769	-	58	38.384	Poecilia_mexicana
FBgn0030010	CG10959	61	39.695	ENSSDUG00000008329	-	90	39.695	Seriola_dumerili
FBgn0030010	CG10959	57	34.483	ENSXMAG00000029138	-	52	34.483	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000122	negative regulation of transcription by RNA polymerase II	-	ISS	Process
GO:0001227	DNA-binding transcription repressor activity, RNA polymerase II-specific	-	ISS	Function
GO:0003677	DNA binding	21873635.	IBA	Function
GO:0003700	DNA-binding transcription factor activity	21873635.	IBA	Function
GO:0003700	DNA-binding transcription factor activity	-	ISS	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	-	ISS	Component
GO:0006355	regulation of transcription, DNA-templated	21873635.	IBA	Process