EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0030012 (Gene tree)
Gene ID: 31745
Gene Symbol: CG18262
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Plus strand
Length: 1586 bases
Position: chrX:8152948-8154533
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0071109	zf-C2H2	PF00096.26	2e-32	1	5
FBpp0071109	zf-C2H2	PF00096.26	2e-32	2	5
FBpp0071109	zf-C2H2	PF00096.26	2e-32	3	5
FBpp0071109	zf-C2H2	PF00096.26	2e-32	4	5
FBpp0071109	zf-C2H2	PF00096.26	2e-32	5	5
FBpp0071109	zf-met	PF12874.7	4e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0071158	-	1586	-	FBpp0071109	469 (aa)	-	Q5U1C2

Gene Model

Click here to download FBgn0030012's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0030012's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
FBgn0030012	CG18262	64	37.168	FBgn0037120	CG11247	58	37.168
FBgn0030012	CG18262	84	30.824	FBgn0030010	CG10959	50	37.860
FBgn0030012	CG18262	53	31.496	FBgn0029928	CG3032	63	31.496
FBgn0030012	CG18262	63	32.680	FBgn0052772	CG32772	82	40.909
FBgn0030012	CG18262	53	30.198	FBgn0037722	CG8319	58	30.198
FBgn0030012	CG18262	54	33.058	FBgn0020309	crol	54	38.503

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0030012	CG18262	59	33.083	ENSACIG00000017166	-	60	33.083	Amphilophus_citrinellus
FBgn0030012	CG18262	59	30.000	ENSAPEG00000019755	-	99	32.143	Amphiprion_percula
FBgn0030012	CG18262	52	32.231	WBGene00021374	Y37E11B.1	89	33.043	Caenorhabditis_elegans
FBgn0030012	CG18262	53	32.298	ENSCING00000005713	-	67	32.298	Ciona_intestinalis
FBgn0030012	CG18262	62	30.994	ENSCING00000004861	zf(c2h2)-12	68	30.994	Ciona_intestinalis
FBgn0030012	CG18262	55	37.607	ENSCSAVG00000009574	-	100	37.143	Ciona_savignyi
FBgn0030012	CG18262	52	38.889	ENSCSAVG00000003895	-	100	38.889	Ciona_savignyi
FBgn0030012	CG18262	53	31.973	ENSCSEG00000005491	-	73	31.973	Cynoglossus_semilaevis
FBgn0030012	CG18262	68	36.082	ENSCVAG00000002295	-	83	35.664	Cyprinodon_variegatus
FBgn0030012	CG18262	50	31.132	ENSCVAG00000019574	-	95	31.132	Cyprinodon_variegatus
FBgn0030012	CG18262	53	36.145	ENSEBUG00000004841	-	80	36.145	Eptatretus_burgeri
FBgn0030012	CG18262	63	37.154	ENSEBUG00000015522	-	69	39.394	Eptatretus_burgeri
FBgn0030012	CG18262	62	36.275	ENSEBUG00000008392	-	75	36.275	Eptatretus_burgeri
FBgn0030012	CG18262	72	38.636	ENSEBUG00000000735	-	99	38.636	Eptatretus_burgeri
FBgn0030012	CG18262	78	30.741	ENSELUG00000020794	-	63	30.686	Esox_lucius
FBgn0030012	CG18262	63	37.956	ENSFHEG00000013644	-	75	33.600	Fundulus_heteroclitus
FBgn0030012	CG18262	63	30.576	ENSFHEG00000012990	-	96	30.588	Fundulus_heteroclitus
FBgn0030012	CG18262	60	31.641	ENSFHEG00000020889	-	73	31.496	Fundulus_heteroclitus
FBgn0030012	CG18262	57	30.035	ENSFHEG00000003596	-	52	30.093	Fundulus_heteroclitus
FBgn0030012	CG18262	57	36.029	ENSGACG00000018415	-	99	36.029	Gasterosteus_aculeatus
FBgn0030012	CG18262	77	40.833	ENSHCOG00000017437	-	81	40.833	Hippocampus_comes
FBgn0030012	CG18262	61	33.735	ENSHCOG00000014881	-	73	34.188	Hippocampus_comes
FBgn0030012	CG18262	60	30.070	ENSHCOG00000008181	-	72	30.769	Hippocampus_comes
FBgn0030012	CG18262	58	32.298	ENSKMAG00000007658	-	89	32.536	Kryptolebias_marmoratus
FBgn0030012	CG18262	56	35.714	ENSKMAG00000012909	-	59	39.007	Kryptolebias_marmoratus
FBgn0030012	CG18262	55	37.879	ENSLBEG00000026573	-	51	31.731	Labrus_bergylta
FBgn0030012	CG18262	62	34.091	ENSONIG00000003224	-	93	35.602	Oreochromis_niloticus
FBgn0030012	CG18262	58	36.111	ENSONIG00000016416	-	98	34.307	Oreochromis_niloticus
FBgn0030012	CG18262	57	36.000	ENSONIG00000007812	-	99	35.404	Oreochromis_niloticus
FBgn0030012	CG18262	54	33.824	ENSONIG00000003471	-	99	35.246	Oreochromis_niloticus
FBgn0030012	CG18262	63	30.263	ENSORLG00015018254	-	86	32.215	Oryzias_latipes_hsok
FBgn0030012	CG18262	62	32.301	ENSPMGG00000000243	-	76	33.898	Periophthalmus_magnuspinnatus
FBgn0030012	CG18262	52	31.765	ENSPMGG00000019842	-	68	31.765	Periophthalmus_magnuspinnatus
FBgn0030012	CG18262	54	35.088	ENSPMGG00000000218	-	67	35.088	Periophthalmus_magnuspinnatus
FBgn0030012	CG18262	68	33.083	ENSPMGG00000010664	-	90	34.043	Periophthalmus_magnuspinnatus
FBgn0030012	CG18262	58	36.496	ENSPMGG00000000458	-	93	36.496	Periophthalmus_magnuspinnatus
FBgn0030012	CG18262	64	35.859	ENSPMGG00000022524	-	93	35.859	Periophthalmus_magnuspinnatus
FBgn0030012	CG18262	59	39.801	ENSPMAG00000007983	-	99	39.801	Petromyzon_marinus
FBgn0030012	CG18262	57	34.940	ENSPFOG00000020691	-	80	34.940	Poecilia_formosa
FBgn0030012	CG18262	64	35.955	ENSPFOG00000002879	-	98	36.747	Poecilia_formosa
FBgn0030012	CG18262	61	32.794	ENSPLAG00000006174	-	70	37.895	Poecilia_latipinna
FBgn0030012	CG18262	56	33.778	ENSPMEG00000019229	-	63	34.896	Poecilia_mexicana
FBgn0030012	CG18262	73	42.045	ENSPMEG00000022676	-	99	42.045	Poecilia_mexicana
FBgn0030012	CG18262	52	34.222	ENSPREG00000007146	-	67	34.222	Poecilia_reticulata
FBgn0030012	CG18262	59	34.359	ENSPREG00000016204	-	61	35.000	Poecilia_reticulata
FBgn0030012	CG18262	61	32.847	ENSPNAG00000025211	-	56	33.600	Pygocentrus_nattereri
FBgn0030012	CG18262	59	30.000	ENSSMAG00000001359	-	85	30.000	Scophthalmus_maximus
FBgn0030012	CG18262	65	34.444	ENSSDUG00000000946	-	95	34.902	Seriola_dumerili
FBgn0030012	CG18262	59	31.193	ENSSLDG00000000464	-	62	31.193	Seriola_lalandi_dorsalis
FBgn0030012	CG18262	55	33.684	ENSSLDG00000015796	-	68	33.684	Seriola_lalandi_dorsalis
FBgn0030012	CG18262	55	31.481	ENSTRUG00000019941	-	63	31.481	Takifugu_rubripes
FBgn0030012	CG18262	63	38.028	ENSTNIG00000008154	-	100	38.028	Tetraodon_nigroviridis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003700	DNA-binding transcription factor activity	-	ISS	Function
GO:0005634	nucleus	-	ISS	Component
GO:0010628	positive regulation of gene expression	-	ISS	Process
GO:0043565	sequence-specific DNA binding	-	ISS	Function