EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0030061 (Gene tree)
Gene ID: 31810
Gene Symbol: CG1785
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Plus strand
Length: 2130 bases
Position: chrX:8714936-8717065
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0071193	Nop53	PF07767.11	2.8e-88	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0071250	-	1885	-	FBpp0071193	478 (aa)	-	Q9W3C2

Gene Model

Click here to download FBgn0030061's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0030061's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0030061	CG1785	90	30.649	ENSAOCG00000007002	nop53	90	31.590	Amphiprion_ocellaris
FBgn0030061	CG1785	85	31.132	ENSATEG00000021860	nop53	89	30.660	Anabas_testudineus
FBgn0030061	CG1785	55	30.483	ENSACAG00000011362	-	89	30.483	Anolis_carolinensis
FBgn0030061	CG1785	90	31.532	ENSACLG00000011832	nop53	90	32.135	Astatotilapia_calliptera
FBgn0030061	CG1785	90	30.612	ENSAMXG00000014883	nop53	90	31.333	Astyanax_mexicanus
FBgn0030061	CG1785	94	30.000	ENSBTAG00000021192	NOP53	81	30.819	Bos_taurus
FBgn0030061	CG1785	53	30.739	ENSCPBG00000009047	NOP53	67	31.650	Chrysemys_picta_bellii
FBgn0030061	CG1785	80	38.710	ENSEEUG00000005287	NOP53	73	38.710	Erinaceus_europaeus
FBgn0030061	CG1785	90	31.293	ENSELUG00000001525	nop53	91	31.461	Esox_lucius
FBgn0030061	CG1785	94	30.208	ENSFCAG00000010861	NOP53	90	30.603	Felis_catus
FBgn0030061	CG1785	55	32.443	ENSHBUG00000023625	nop53	90	31.910	Haplochromis_burtoni
FBgn0030061	CG1785	78	31.788	ENSHGLG00100015613	NOP53	80	37.500	Heterocephalus_glaber_male
FBgn0030061	CG1785	86	30.000	ENSLACG00000018320	NOP53	96	31.566	Latimeria_chalumnae
FBgn0030061	CG1785	90	30.505	ENSMZEG00005005033	nop53	89	30.227	Maylandia_zebra
FBgn0030061	CG1785	90	30.045	ENSMALG00000020350	nop53	86	31.544	Monopterus_albus
FBgn0030061	CG1785	55	30.483	MGP_PahariEiJ_G0021074	-	98	30.851	Mus_pahari
FBgn0030061	CG1785	90	30.631	ENSONIG00000016624	nop53	90	31.236	Oreochromis_niloticus
FBgn0030061	CG1785	94	30.208	ENSPPRG00000008954	NOP53	90	30.819	Panthera_pardus
FBgn0030061	CG1785	55	30.153	ENSPCIG00000016718	NOP53	54	32.210	Phascolarctos_cinereus
FBgn0030061	CG1785	90	30.248	ENSPNYG00000001341	nop53	90	31.910	Pundamilia_nyererei
FBgn0030061	CG1785	55	31.679	ENSSHAG00000002239	NOP53	63	32.830	Sarcophilus_harrisii
FBgn0030061	CG1785	55	31.698	ENSSARG00000014109	NOP53	54	32.075	Sorex_araneus
FBgn0030061	CG1785	94	30.898	ENSTTRG00000011831	NOP53	90	30.983	Tursiops_truncatus
FBgn0030061	CG1785	68	30.702	ENSXETG00000002782	nop53	62	30.702	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000027	ribosomal large subunit assembly	21873635.	IBA	Process
GO:0000027	ribosomal large subunit assembly	-	ISS	Process
GO:0005654	nucleoplasm	-	ISS	Component
GO:0005730	nucleolus	21873635.	IBA	Component
GO:0005730	nucleolus	-	ISS	Component
GO:0006364	rRNA processing	21873635.	IBA	Process
GO:0008097	5S rRNA binding	21873635.	IBA	Function