EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0030067 (Gene tree)
Gene ID: 31818
Gene Symbol: Rbm13
Alias: -
Full Name: RNA-binding motif protein 13
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Plus strand
Length: 2063 bases
Position: chrX:8901699-8903761
Accession: FBgn0030067
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0071198	Ribosomal_L28e	PF01778.17	1.3e-34	1	1
FBpp0311991	Ribosomal_L28e	PF01778.17	1.3e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0071255	-	1238	-	FBpp0071198	343 (aa)	-	Q9W3B2
FBtr0346163	-	1535	-	FBpp0311991	343 (aa)	-	Q9W3B2

Gene Model

Click here to download FBgn0030067's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0030067's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0030067	Rbm13	57	62.121	ENSG00000198042	MAK16	96	62.879	Homo_sapiens
FBgn0030067	Rbm13	79	52.768	ENSAMEG00000002852	MAK16	64	63.158	Ailuropoda_melanoleuca
FBgn0030067	Rbm13	54	62.903	ENSACIG00000004962	mak16	83	49.814	Amphilophus_citrinellus
FBgn0030067	Rbm13	55	62.632	ENSAOCG00000018230	mak16	73	53.975	Amphiprion_ocellaris
FBgn0030067	Rbm13	55	64.737	ENSAPEG00000022237	mak16	74	52.964	Amphiprion_percula
FBgn0030067	Rbm13	74	53.516	ENSATEG00000012637	mak16	85	52.015	Anabas_testudineus
FBgn0030067	Rbm13	78	52.963	ENSACAG00000000888	MAK16	65	63.684	Anolis_carolinensis
FBgn0030067	Rbm13	57	62.626	ENSANAG00000030954	MAK16	63	64.211	Aotus_nancymaae
FBgn0030067	Rbm13	55	56.316	ENSACLG00000006342	mak16	61	56.316	Astatotilapia_calliptera
FBgn0030067	Rbm13	55	63.874	ENSAMXG00000033330	mak16	61	63.684	Astyanax_mexicanus
FBgn0030067	Rbm13	99	46.903	ENSBTAG00000033504	MAK16	64	63.158	Bos_taurus
FBgn0030067	Rbm13	73	49.407	WBGene00015811	C16A3.6	59	56.842	Caenorhabditis_elegans
FBgn0030067	Rbm13	99	45.428	ENSCJAG00000048459	MAK16	63	63.684	Callithrix_jacchus
FBgn0030067	Rbm13	99	46.471	ENSCAFG00000006325	MAK16	74	53.942	Canis_familiaris
FBgn0030067	Rbm13	99	46.176	ENSCAFG00020001324	MAK16	74	53.942	Canis_lupus_dingo
FBgn0030067	Rbm13	57	47.475	ENSCHIG00000014271	-	59	46.842	Capra_hircus
FBgn0030067	Rbm13	99	46.903	ENSCHIG00000017057	-	64	63.158	Capra_hircus
FBgn0030067	Rbm13	99	46.176	ENSTSYG00000028100	MAK16	64	63.684	Carlito_syrichta
FBgn0030067	Rbm13	56	63.212	ENSCCAG00000025382	MAK16	74	53.942	Cebus_capucinus
FBgn0030067	Rbm13	99	45.133	ENSCATG00000030566	MAK16	63	63.684	Cercocebus_atys
FBgn0030067	Rbm13	58	63.184	ENSCLAG00000002726	MAK16	64	64.737	Chinchilla_lanigera
FBgn0030067	Rbm13	51	63.636	ENSCHOG00000009081	MAK16	57	65.476	Choloepus_hoffmanni
FBgn0030067	Rbm13	73	54.688	ENSCPBG00000000176	MAK16	81	56.574	Chrysemys_picta_bellii
FBgn0030067	Rbm13	55	60.104	ENSCING00000007225	-	92	60.104	Ciona_intestinalis
FBgn0030067	Rbm13	55	58.549	ENSCSAVG00000005901	-	65	58.549	Ciona_savignyi
FBgn0030067	Rbm13	57	62.121	ENSCANG00000032211	MAK16	63	63.684	Colobus_angolensis_palliatus
FBgn0030067	Rbm13	75	54.440	ENSCGRG00001016542	Mak16	64	63.684	Cricetulus_griseus_chok1gshd
FBgn0030067	Rbm13	75	54.440	ENSCGRG00000007547	Mak16	64	63.684	Cricetulus_griseus_crigri
FBgn0030067	Rbm13	73	52.800	ENSCSEG00000010069	mak16	66	64.211	Cynoglossus_semilaevis
FBgn0030067	Rbm13	72	53.226	ENSCVAG00000017294	mak16	75	53.226	Cyprinodon_variegatus
FBgn0030067	Rbm13	56	64.767	ENSDARG00000003527	mak16	75	65.263	Danio_rerio
FBgn0030067	Rbm13	58	62.814	ENSDNOG00000008424	MAK16	64	64.737	Dasypus_novemcinctus
FBgn0030067	Rbm13	52	51.381	ENSDORG00000024387	-	65	51.934	Dipodomys_ordii
FBgn0030067	Rbm13	56	62.176	ENSDORG00000015722	-	62	63.784	Dipodomys_ordii
FBgn0030067	Rbm13	57	64.286	ENSEBUG00000011900	mak16	64	64.737	Eptatretus_burgeri
FBgn0030067	Rbm13	97	47.214	ENSEASG00005016762	MAK16	64	63.684	Equus_asinus_asinus
FBgn0030067	Rbm13	97	47.214	ENSECAG00000016532	MAK16	64	63.684	Equus_caballus
FBgn0030067	Rbm13	57	61.616	ENSEEUG00000006280	MAK16	64	63.158	Erinaceus_europaeus
FBgn0030067	Rbm13	78	45.745	ENSELUG00000008291	mak16	81	51.029	Esox_lucius
FBgn0030067	Rbm13	99	46.471	ENSFCAG00000033972	MAK16	64	62.632	Felis_catus
FBgn0030067	Rbm13	56	64.249	ENSFALG00000006827	MAK16	65	65.263	Ficedula_albicollis
FBgn0030067	Rbm13	99	46.064	ENSFDAG00000012817	MAK16	64	63.684	Fukomys_damarensis
FBgn0030067	Rbm13	55	64.921	ENSFHEG00000007084	mak16	82	50.730	Fundulus_heteroclitus
FBgn0030067	Rbm13	97	46.407	ENSGMOG00000000511	mak16	86	53.160	Gadus_morhua
FBgn0030067	Rbm13	65	58.929	ENSGALG00000001663	MAK16	65	65.263	Gallus_gallus
FBgn0030067	Rbm13	97	47.447	ENSGAFG00000015800	mak16	64	63.684	Gambusia_affinis
FBgn0030067	Rbm13	97	46.547	ENSGACG00000001081	mak16	64	65.263	Gasterosteus_aculeatus
FBgn0030067	Rbm13	55	65.969	ENSGAGG00000022177	MAK16	64	65.789	Gopherus_agassizii
FBgn0030067	Rbm13	57	62.626	ENSGGOG00000010487	MAK16	63	64.211	Gorilla_gorilla
FBgn0030067	Rbm13	75	46.693	ENSHBUG00000006023	mak16	63	56.316	Haplochromis_burtoni
FBgn0030067	Rbm13	79	53.506	ENSHGLG00000002981	MAK16	64	64.211	Heterocephalus_glaber_female
FBgn0030067	Rbm13	79	53.506	ENSHGLG00100007722	MAK16	64	64.211	Heterocephalus_glaber_male
FBgn0030067	Rbm13	56	63.731	ENSIPUG00000005863	mak16	61	64.211	Ictalurus_punctatus
FBgn0030067	Rbm13	58	60.804	ENSSTOG00000007812	MAK16	64	62.632	Ictidomys_tridecemlineatus
FBgn0030067	Rbm13	55	53.403	ENSJJAG00000020605	-	61	53.158	Jaculus_jaculus
FBgn0030067	Rbm13	73	52.000	ENSJJAG00000000383	-	70	60.526	Jaculus_jaculus
FBgn0030067	Rbm13	79	51.471	ENSJJAG00000015237	-	65	63.158	Jaculus_jaculus
FBgn0030067	Rbm13	55	63.351	ENSKMAG00000011338	mak16	63	63.158	Kryptolebias_marmoratus
FBgn0030067	Rbm13	55	65.263	ENSLBEG00000026813	mak16	62	65.263	Labrus_bergylta
FBgn0030067	Rbm13	58	67.000	ENSLACG00000018758	MAK16	63	67.895	Latimeria_chalumnae
FBgn0030067	Rbm13	56	64.767	ENSLOCG00000015135	mak16	61	65.263	Lepisosteus_oculatus
FBgn0030067	Rbm13	99	47.953	ENSLAFG00000026404	MAK16	64	63.684	Loxodonta_africana
FBgn0030067	Rbm13	99	45.588	ENSMFAG00000031257	MAK16	63	63.684	Macaca_fascicularis
FBgn0030067	Rbm13	99	45.588	ENSMMUG00000010244	MAK16	63	63.684	Macaca_mulatta
FBgn0030067	Rbm13	99	45.588	ENSMNEG00000035461	MAK16	63	63.684	Macaca_nemestrina
FBgn0030067	Rbm13	99	46.471	ENSMLEG00000028683	MAK16	64	63.684	Mandrillus_leucophaeus
FBgn0030067	Rbm13	55	64.737	ENSMAMG00000018478	mak16	63	64.737	Mastacembelus_armatus
FBgn0030067	Rbm13	55	64.211	ENSMZEG00005001916	mak16	62	64.211	Maylandia_zebra
FBgn0030067	Rbm13	92	47.950	ENSMGAG00000001635	MAK16	73	58.904	Meleagris_gallopavo
FBgn0030067	Rbm13	56	62.694	ENSMAUG00000008496	Mak16	64	63.158	Mesocricetus_auratus
FBgn0030067	Rbm13	57	62.626	ENSMICG00000013106	MAK16	63	64.211	Microcebus_murinus
FBgn0030067	Rbm13	56	63.212	ENSMOCG00000007445	Mak16	63	63.684	Microtus_ochrogaster
FBgn0030067	Rbm13	66	50.847	ENSMODG00000011096	MAK16	63	59.043	Monodelphis_domestica
FBgn0030067	Rbm13	54	59.043	ENSMALG00000003829	mak16	64	59.043	Monopterus_albus
FBgn0030067	Rbm13	56	63.212	MGP_CAROLIEiJ_G0030957	Mak16	84	47.719	Mus_caroli
FBgn0030067	Rbm13	56	63.212	ENSMUSG00000031578	Mak16	84	48.252	Mus_musculus
FBgn0030067	Rbm13	99	46.765	MGP_PahariEiJ_G0021426	Mak16	64	64.211	Mus_pahari
FBgn0030067	Rbm13	56	63.212	MGP_SPRETEiJ_G0032075	Mak16	64	63.684	Mus_spretus
FBgn0030067	Rbm13	56	62.694	ENSMPUG00000010181	MAK16	64	63.158	Mustela_putorius_furo
FBgn0030067	Rbm13	57	61.111	ENSMLUG00000002758	MAK16	64	62.632	Myotis_lucifugus
FBgn0030067	Rbm13	99	44.838	ENSNGAG00000008772	Mak16	63	64.211	Nannospalax_galili
FBgn0030067	Rbm13	57	62.121	ENSNLEG00000028118	MAK16	63	63.684	Nomascus_leucogenys
FBgn0030067	Rbm13	77	52.222	ENSMEUG00000006945	MAK16	64	63.684	Notamacropus_eugenii
FBgn0030067	Rbm13	56	52.850	ENSOPRG00000002116	MAK16	63	53.158	Ochotona_princeps
FBgn0030067	Rbm13	57	62.626	ENSODEG00000005524	-	65	64.211	Octodon_degus
FBgn0030067	Rbm13	57	49.495	ENSODEG00000002030	-	66	50.526	Octodon_degus
FBgn0030067	Rbm13	78	46.642	ENSODEG00000000020	-	77	48.133	Octodon_degus
FBgn0030067	Rbm13	72	54.032	ENSONIG00000000560	mak16	74	56.198	Oreochromis_niloticus
FBgn0030067	Rbm13	56	62.694	ENSOANG00000002395	MAK16	69	63.158	Ornithorhynchus_anatinus
FBgn0030067	Rbm13	56	62.176	ENSOCUG00000008735	MAK16	64	62.632	Oryctolagus_cuniculus
FBgn0030067	Rbm13	56	63.212	ENSORLG00000019058	mak16	64	63.684	Oryzias_latipes
FBgn0030067	Rbm13	56	63.731	ENSORLG00015007275	mak16	64	64.211	Oryzias_latipes_hsok
FBgn0030067	Rbm13	78	50.746	ENSOMEG00000009317	mak16	63	64.211	Oryzias_melastigma
FBgn0030067	Rbm13	58	56.784	ENSOGAG00000024416	MAK16	64	58.421	Otolemur_garnettii
FBgn0030067	Rbm13	99	47.198	ENSOARG00000000384	MAK16	64	63.158	Ovis_aries
FBgn0030067	Rbm13	57	62.121	ENSPPAG00000035102	MAK16	63	63.684	Pan_paniscus
FBgn0030067	Rbm13	79	52.030	ENSPPRG00000002317	MAK16	64	62.632	Panthera_pardus
FBgn0030067	Rbm13	79	52.030	ENSPTIG00000014223	MAK16	64	62.632	Panthera_tigris_altaica
FBgn0030067	Rbm13	99	44.838	ENSPTRG00000020149	MAK16	63	63.684	Pan_troglodytes
FBgn0030067	Rbm13	99	44.928	ENSPANG00000010420	MAK16	64	62.051	Papio_anubis
FBgn0030067	Rbm13	55	64.737	ENSPKIG00000002082	mak16	62	64.737	Paramormyrops_kingsleyae
FBgn0030067	Rbm13	97	43.275	ENSPSIG00000012396	MAK16	63	58.031	Pelodiscus_sinensis
FBgn0030067	Rbm13	56	57.732	ENSPMGG00000004162	mak16	58	58.115	Periophthalmus_magnuspinnatus
FBgn0030067	Rbm13	77	53.030	ENSPEMG00000015171	Mak16	64	63.158	Peromyscus_maniculatus_bairdii
FBgn0030067	Rbm13	57	63.636	ENSPCIG00000028005	MAK16	64	64.737	Phascolarctos_cinereus
FBgn0030067	Rbm13	74	54.118	ENSPFOG00000001068	mak16	74	54.132	Poecilia_formosa
FBgn0030067	Rbm13	55	64.921	ENSPLAG00000022551	mak16	76	53.968	Poecilia_latipinna
FBgn0030067	Rbm13	74	54.902	ENSPMEG00000006460	mak16	66	63.784	Poecilia_mexicana
FBgn0030067	Rbm13	57	62.121	ENSPPYG00000018501	MAK16	63	63.684	Pongo_abelii
FBgn0030067	Rbm13	57	45.960	ENSPCAG00000016090	MAK16	74	40.664	Procavia_capensis
FBgn0030067	Rbm13	57	61.538	ENSPVAG00000004692	MAK16	83	52.590	Pteropus_vampyrus
FBgn0030067	Rbm13	55	64.398	ENSPNAG00000014528	mak16	68	65.405	Pygocentrus_nattereri
FBgn0030067	Rbm13	56	62.694	ENSRNOG00000010783	Mak16	65	63.158	Rattus_norvegicus
FBgn0030067	Rbm13	99	46.018	ENSRBIG00000039940	MAK16	63	63.684	Rhinopithecus_bieti
FBgn0030067	Rbm13	99	46.018	ENSRROG00000032196	MAK16	63	63.684	Rhinopithecus_roxellana
FBgn0030067	Rbm13	50	58.286	YAL025C	-	57	58.286	Saccharomyces_cerevisiae
FBgn0030067	Rbm13	99	46.313	ENSSBOG00000030325	MAK16	63	64.211	Saimiri_boliviensis_boliviensis
FBgn0030067	Rbm13	76	51.331	ENSSHAG00000007593	MAK16	63	64.211	Sarcophilus_harrisii
FBgn0030067	Rbm13	89	46.906	ENSSFOG00015019462	-	58	66.667	Scleropages_formosus
FBgn0030067	Rbm13	99	49.709	ENSSFOG00015019447	mak16	63	67.895	Scleropages_formosus
FBgn0030067	Rbm13	72	52.823	ENSSMAG00000018432	mak16	63	63.158	Scophthalmus_maximus
FBgn0030067	Rbm13	55	65.263	ENSSDUG00000013093	mak16	61	65.263	Seriola_dumerili
FBgn0030067	Rbm13	54	63.978	ENSSLDG00000002408	mak16	60	64.324	Seriola_lalandi_dorsalis
FBgn0030067	Rbm13	59	49.010	ENSSARG00000009574	MAK16	56	62.791	Sorex_araneus
FBgn0030067	Rbm13	57	62.121	ENSSPUG00000008956	MAK16	66	64.211	Sphenodon_punctatus
FBgn0030067	Rbm13	60	60.194	ENSSPAG00000005102	mak16	85	41.751	Stegastes_partitus
FBgn0030067	Rbm13	79	51.661	ENSSSCG00000036947	MAK16	64	63.158	Sus_scrofa
FBgn0030067	Rbm13	58	41.791	ENSSSCG00000032618	-	67	43.158	Sus_scrofa
FBgn0030067	Rbm13	56	51.031	ENSTGUG00000017303	MAK16	75	45.643	Taeniopygia_guttata
FBgn0030067	Rbm13	55	66.316	ENSTRUG00000011544	mak16	65	66.316	Takifugu_rubripes
FBgn0030067	Rbm13	55	47.368	ENSTBEG00000001861	MAK16	59	49.398	Tupaia_belangeri
FBgn0030067	Rbm13	99	47.198	ENSTTRG00000013015	MAK16	64	63.158	Tursiops_truncatus
FBgn0030067	Rbm13	56	62.694	ENSUAMG00000026894	MAK16	64	63.158	Ursus_americanus
FBgn0030067	Rbm13	56	62.694	ENSUMAG00000021133	MAK16	64	63.158	Ursus_maritimus
FBgn0030067	Rbm13	99	41.003	ENSVPAG00000006017	MAK16	64	54.211	Vicugna_pacos
FBgn0030067	Rbm13	99	45.723	ENSVVUG00000019933	MAK16	74	53.942	Vulpes_vulpes
FBgn0030067	Rbm13	76	52.852	ENSXETG00000016495	mak16	63	64.737	Xenopus_tropicalis
FBgn0030067	Rbm13	95	41.994	ENSXCOG00000012528	mak16	61	55.319	Xiphophorus_couchianus
FBgn0030067	Rbm13	55	64.398	ENSXMAG00000029335	mak16	64	64.211	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005730	nucleolus	21873635.	IBA	Component
GO:0030687	preribosome, large subunit precursor	21873635.	IBA	Component