EuRBPDB

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  • Description
  • RBDs
  • RBPome
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
FBgn0030136 (Gene tree)
Gene ID
31897
Gene Symbol
RpS28b
Alias
-
Full Name
Ribosomal protein S28b
Gene Type
protein_coding
Species
Drosophila_melanogaster
Status
confidence
Strand
Plus strand
Length
1039 bases
Position
chrX:9554623-9555661
Accession
FBgn0030136
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
FBpp0071295Ribosomal_S28ePF01200.181.3e-3211
FBpp0310057Ribosomal_S28ePF01200.181.3e-3211
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
27197210The mRNA-bound proteome of the early fly embryoIC & embryos2016 Apr 28Wessels HHDOI: 10.1101/gr.200386.115
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
FBtr0071360-520-FBpp007129565 (aa)-Q9W334
FBtr0343411-972-FBpp031005765 (aa)-Q9W334
Gene Model
Click here to download FBgn0030136's gene model file
Protein-Protein Interaction (PPI)

Clik here to download FBgn0030136's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
FBgn0030136RpS28b10081.538FBgn0039739RpS28a10081.538
FBgn0030136RpS28b8944.068FBgn0085211RpS28-like7844.068
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
FBgn0030136RpS28b9779.365ENSG00000233927RPS289179.365Homo_sapiens
FBgn0030136RpS28b9780.952ENSAPOG00000015173rps289180.952Acanthochromis_polyacanthus
FBgn0030136RpS28b9779.365ENSAMEG00000004917RPS289179.365Ailuropoda_melanoleuca
FBgn0030136RpS28b9780.952ENSACIG00000020589rps289180.952Amphilophus_citrinellus
FBgn0030136RpS28b9780.952ENSAOCG00000019080rps289180.952Amphiprion_ocellaris
FBgn0030136RpS28b9780.952ENSAPEG00000015829rps289180.952Amphiprion_percula
FBgn0030136RpS28b9780.952ENSATEG00000018266rps289180.952Anabas_testudineus
FBgn0030136RpS28b6380.488ENSAPLG00000000915RPS2810080.488Anas_platyrhynchos
FBgn0030136RpS28b9760.317ENSANAG00000034851-9060.317Aotus_nancymaae
FBgn0030136RpS28b9779.365ENSANAG00000036427-9179.365Aotus_nancymaae
FBgn0030136RpS28b9774.603ENSANAG00000003228-9174.603Aotus_nancymaae
FBgn0030136RpS28b9776.190ENSANAG00000019522-9176.190Aotus_nancymaae
FBgn0030136RpS28b9780.952ENSACLG00000008061rps289180.952Astatotilapia_calliptera
FBgn0030136RpS28b9780.952ENSAMXG00000042497rps289180.952Astyanax_mexicanus
FBgn0030136RpS28b9779.365ENSBTAG00000002468RPS289179.365Bos_taurus
FBgn0030136RpS28b10081.818WBGene00004497rps-2810081.818Caenorhabditis_elegans
FBgn0030136RpS28b8875.439ENSCJAG00000022371-5675.439Callithrix_jacchus
FBgn0030136RpS28b9779.365ENSCJAG00000010726RPS289179.365Callithrix_jacchus
FBgn0030136RpS28b9779.365ENSCHIG00000017787RPS289179.365Capra_hircus
FBgn0030136RpS28b9769.841ENSCHIG00000007447-9169.841Capra_hircus
FBgn0030136RpS28b8667.857ENSCHIG00000009632-9067.857Capra_hircus
FBgn0030136RpS28b9779.365ENSTSYG00000031396-9179.365Carlito_syrichta
FBgn0030136RpS28b9557.143ENSTSYG00000027428-8957.143Carlito_syrichta
FBgn0030136RpS28b9779.365ENSCPOG00000022876RPS289179.365Cavia_porcellus
FBgn0030136RpS28b9763.492ENSCCAG00000029502-9163.492Cebus_capucinus
FBgn0030136RpS28b9768.254ENSCCAG00000016358-9068.254Cebus_capucinus
FBgn0030136RpS28b9779.365ENSCCAG00000030298-9179.365Cebus_capucinus
FBgn0030136RpS28b9779.365ENSCATG00000014458RPS289179.365Cercocebus_atys
FBgn0030136RpS28b9779.365ENSCLAG00000002218RPS289179.365Chinchilla_lanigera
FBgn0030136RpS28b9269.355ENSCLAG00000017469-8969.355Chinchilla_lanigera
FBgn0030136RpS28b9579.032ENSCSAG00000000174-9179.032Chlorocebus_sabaeus
FBgn0030136RpS28b9779.365ENSCPBG00000017064RPS289179.365Chrysemys_picta_bellii
FBgn0030136RpS28b9181.356ENSCING00000013272-8781.356Ciona_intestinalis
FBgn0030136RpS28b9779.365ENSCANG00000020391RPS289179.365Colobus_angolensis_palliatus
FBgn0030136RpS28b9779.365ENSCGRG00001022084Rps289179.365Cricetulus_griseus_chok1gshd
FBgn0030136RpS28b9766.667ENSCGRG00001004003-9166.667Cricetulus_griseus_chok1gshd
FBgn0030136RpS28b8069.091ENSCGRG00000010737-8269.091Cricetulus_griseus_crigri
FBgn0030136RpS28b9779.365ENSCGRG00000004955Rps289179.365Cricetulus_griseus_crigri
FBgn0030136RpS28b9780.952ENSCSEG00000011735rps289180.952Cynoglossus_semilaevis
FBgn0030136RpS28b9780.952ENSCVAG00000012656rps289180.952Cyprinodon_variegatus
FBgn0030136RpS28b9780.952ENSDARG00000035860rps289180.952Danio_rerio
FBgn0030136RpS28b7261.702ENSDNOG00000041203-7261.702Dasypus_novemcinctus
FBgn0030136RpS28b9467.213ENSDNOG00000043999-8867.213Dasypus_novemcinctus
FBgn0030136RpS28b9463.934ENSDNOG00000044899-8863.934Dasypus_novemcinctus
FBgn0030136RpS28b8866.667ENSDNOG00000043010-8366.667Dasypus_novemcinctus
FBgn0030136RpS28b9779.365ENSDNOG00000038487-9179.365Dasypus_novemcinctus
FBgn0030136RpS28b8970.690ENSDNOG00000036089-8470.690Dasypus_novemcinctus
FBgn0030136RpS28b9779.365ENSDORG00000027636Rps289179.365Dipodomys_ordii
FBgn0030136RpS28b9477.049ENSEBUG00000006971rps288877.049Eptatretus_burgeri
FBgn0030136RpS28b9779.365ENSEASG00005003719RPS289179.365Equus_asinus_asinus
FBgn0030136RpS28b9779.365ENSECAG00000017256RPS289179.365Equus_caballus
FBgn0030136RpS28b9765.079ENSEEUG00000006685-9165.079Erinaceus_europaeus
FBgn0030136RpS28b9780.952ENSELUG00000020168RS289180.952Esox_lucius
FBgn0030136RpS28b9779.365ENSFCAG00000024931-9179.365Felis_catus
FBgn0030136RpS28b9566.129ENSFCAG00000040752-9066.129Felis_catus
FBgn0030136RpS28b9779.365ENSFDAG00000009062RPS289179.365Fukomys_damarensis
FBgn0030136RpS28b9780.952ENSFHEG00000005855rps289180.952Fundulus_heteroclitus
FBgn0030136RpS28b9780.952ENSGMOG00000010283rps289180.952Gadus_morhua
FBgn0030136RpS28b9779.365ENSGALG00000049538RPS289179.365Gallus_gallus
FBgn0030136RpS28b9779.365ENSGAFG00000012933rps289179.365Gambusia_affinis
FBgn0030136RpS28b9780.952ENSGACG00000015568rps289180.952Gasterosteus_aculeatus
FBgn0030136RpS28b9773.016ENSGAGG00000004683-6473.016Gopherus_agassizii
FBgn0030136RpS28b8683.929ENSGAGG00000016191-8483.929Gopherus_agassizii
FBgn0030136RpS28b7268.085ENSGAGG00000003977-7168.085Gopherus_agassizii
FBgn0030136RpS28b9779.365ENSGGOG00000024725RPS289179.365Gorilla_gorilla
FBgn0030136RpS28b9780.952ENSHBUG00000011321rps289180.952Haplochromis_burtoni
FBgn0030136RpS28b9779.365ENSHGLG00000015344RPS289179.365Heterocephalus_glaber_female
FBgn0030136RpS28b9771.429ENSHGLG00100020381-9171.429Heterocephalus_glaber_male
FBgn0030136RpS28b9768.254ENSHGLG00100019526-9168.254Heterocephalus_glaber_male
FBgn0030136RpS28b9779.365ENSHGLG00100003314RPS289179.365Heterocephalus_glaber_male
FBgn0030136RpS28b9779.365ENSHCOG00000005849rps289179.365Hippocampus_comes
FBgn0030136RpS28b9780.952ENSIPUG00000008759rps285380.952Ictalurus_punctatus
FBgn0030136RpS28b9779.365ENSSTOG00000022842RPS289179.365Ictidomys_tridecemlineatus
FBgn0030136RpS28b9167.797ENSJJAG00000020121-8967.797Jaculus_jaculus
FBgn0030136RpS28b9766.667ENSJJAG00000021064-9166.667Jaculus_jaculus
FBgn0030136RpS28b9574.194ENSJJAG00000010478-6674.194Jaculus_jaculus
FBgn0030136RpS28b9769.841ENSJJAG00000009096-9169.841Jaculus_jaculus
FBgn0030136RpS28b9463.934ENSJJAG00000012669-9163.934Jaculus_jaculus
FBgn0030136RpS28b9779.365ENSJJAG00000017384-9179.365Jaculus_jaculus
FBgn0030136RpS28b9780.952ENSKMAG00000015763rps289180.952Kryptolebias_marmoratus
FBgn0030136RpS28b6875.000ENSLBEG00000013549rps288375.000Labrus_bergylta
FBgn0030136RpS28b9780.952ENSLOCG00000002654rps287780.952Lepisosteus_oculatus
FBgn0030136RpS28b9779.365ENSLAFG00000029923RPS289179.365Loxodonta_africana
FBgn0030136RpS28b9779.365ENSMFAG00000042430-9179.365Macaca_fascicularis
FBgn0030136RpS28b9777.778ENSMFAG00000024228-9177.778Macaca_fascicularis
FBgn0030136RpS28b9777.778ENSMFAG00000029879-9177.778Macaca_fascicularis
FBgn0030136RpS28b9779.365ENSMMUG00000028895RPS289179.365Macaca_mulatta
FBgn0030136RpS28b9777.778ENSMMUG00000030827-9177.778Macaca_mulatta
FBgn0030136RpS28b9777.778ENSMMUG00000030258-9177.778Macaca_mulatta
FBgn0030136RpS28b9779.365ENSMNEG00000036447RPS289179.365Macaca_nemestrina
FBgn0030136RpS28b9768.254ENSMNEG00000034123-9068.254Macaca_nemestrina
FBgn0030136RpS28b9779.365ENSMLEG00000036014RPS289179.365Mandrillus_leucophaeus
FBgn0030136RpS28b9780.952ENSMAMG00000005811rps289180.952Mastacembelus_armatus
FBgn0030136RpS28b9780.952ENSMZEG00005003997rps289180.952Maylandia_zebra
FBgn0030136RpS28b9779.365ENSMAUG00000014417Rps289179.365Mesocricetus_auratus
FBgn0030136RpS28b9779.365ENSMICG00000026849RPS289179.365Microcebus_murinus
FBgn0030136RpS28b9779.365ENSMOCG00000010653-9179.365Microtus_ochrogaster
FBgn0030136RpS28b9779.365ENSMOCG00000008235-9179.365Microtus_ochrogaster
FBgn0030136RpS28b9776.190ENSMOCG00000006129-9176.190Microtus_ochrogaster
FBgn0030136RpS28b9776.190ENSMOCG00000002602-8276.190Microtus_ochrogaster
FBgn0030136RpS28b9779.365ENSMOCG00000007820-9179.365Microtus_ochrogaster
FBgn0030136RpS28b9777.778ENSMOCG00000001023-9177.778Microtus_ochrogaster
FBgn0030136RpS28b9765.079ENSMOCG00000007029-9065.079Microtus_ochrogaster
FBgn0030136RpS28b9779.365ENSMOCG00000010096-9179.365Microtus_ochrogaster
FBgn0030136RpS28b9779.365ENSMOCG00000018789-9179.365Microtus_ochrogaster
FBgn0030136RpS28b6875.000ENSMMOG00000006246rps288375.000Mola_mola
FBgn0030136RpS28b9779.365ENSMODG00000003890RPS289179.365Monodelphis_domestica
FBgn0030136RpS28b9572.581ENSMODG00000025356-9172.581Monodelphis_domestica
FBgn0030136RpS28b9780.952ENSMALG00000000781rps289180.952Monopterus_albus
FBgn0030136RpS28b9779.365MGP_CAROLIEiJ_G0021418-10083.929Mus_caroli
FBgn0030136RpS28b9779.365ENSMUSG00000067288Rps2810083.929Mus_musculus
FBgn0030136RpS28b9779.365MGP_PahariEiJ_G0020423Rps2810083.929Mus_pahari
FBgn0030136RpS28b9779.365MGP_SPRETEiJ_G0022330-10083.929Mus_spretus
FBgn0030136RpS28b9774.603MGP_SPRETEiJ_G0027470-9174.603Mus_spretus
FBgn0030136RpS28b9779.365ENSMLUG00000023621RPS289179.365Myotis_lucifugus
FBgn0030136RpS28b9771.429ENSNGAG00000011527-9171.429Nannospalax_galili
FBgn0030136RpS28b9469.841ENSNGAG00000015826-8569.841Nannospalax_galili
FBgn0030136RpS28b9779.365ENSNGAG00000010951-9179.365Nannospalax_galili
FBgn0030136RpS28b9779.365ENSNGAG00000000148-9179.365Nannospalax_galili
FBgn0030136RpS28b9780.952ENSNBRG00000001485rps289180.952Neolamprologus_brichardi
FBgn0030136RpS28b9777.778ENSNLEG00000029240-9377.778Nomascus_leucogenys
FBgn0030136RpS28b8683.929ENSNLEG00000036113-10083.929Nomascus_leucogenys
FBgn0030136RpS28b9777.778ENSNLEG00000034904-9177.778Nomascus_leucogenys
FBgn0030136RpS28b9768.254ENSODEG00000019037-9168.254Octodon_degus
FBgn0030136RpS28b9779.365ENSODEG00000012169-9179.365Octodon_degus
FBgn0030136RpS28b9779.365ENSOCUG00000021484RPS289179.365Oryctolagus_cuniculus
FBgn0030136RpS28b9780.952ENSORLG00000029846rps289180.952Oryzias_latipes
FBgn0030136RpS28b9780.952ENSORLG00020022113rps289180.952Oryzias_latipes_hni
FBgn0030136RpS28b9780.952ENSORLG00015005719rps289180.952Oryzias_latipes_hsok
FBgn0030136RpS28b9780.952ENSOMEG00000017093rps289180.952Oryzias_melastigma
FBgn0030136RpS28b9463.934ENSOGAG00000002534-9163.934Otolemur_garnettii
FBgn0030136RpS28b9776.190ENSOGAG00000024475-9176.190Otolemur_garnettii
FBgn0030136RpS28b9567.742ENSOARG00000013830-9067.742Ovis_aries
FBgn0030136RpS28b9779.365ENSOARG00000003689-9179.365Ovis_aries
FBgn0030136RpS28b9768.254ENSOARG00000004121-9168.254Ovis_aries
FBgn0030136RpS28b9779.365ENSPPAG00000028825RPS289179.365Pan_paniscus
FBgn0030136RpS28b9779.365ENSPPRG00000011146RPS289179.365Panthera_pardus
FBgn0030136RpS28b9564.516ENSPPRG00000016498-9064.516Panthera_pardus
FBgn0030136RpS28b9467.213ENSPTIG00000005894-9167.213Panthera_tigris_altaica
FBgn0030136RpS28b9779.365ENSPTRG00000040141RPS289179.365Pan_troglodytes
FBgn0030136RpS28b9779.365ENSPANG00000014319RPS289179.365Papio_anubis
FBgn0030136RpS28b6875.000ENSPKIG00000008060rps288375.000Paramormyrops_kingsleyae
FBgn0030136RpS28b6875.000ENSPMGG00000017476rps288375.000Periophthalmus_magnuspinnatus
FBgn0030136RpS28b9570.149ENSPEMG00000012673-7270.149Peromyscus_maniculatus_bairdii
FBgn0030136RpS28b9779.365ENSPEMG00000015848Rps289179.365Peromyscus_maniculatus_bairdii
FBgn0030136RpS28b9779.365ENSPCIG00000020515RPS289179.365Phascolarctos_cinereus
FBgn0030136RpS28b9753.968ENSPCIG00000026023-8753.968Phascolarctos_cinereus
FBgn0030136RpS28b9574.194ENSPCIG00000004578-7974.194Phascolarctos_cinereus
FBgn0030136RpS28b6382.927ENSPLAG00000009095rps286882.927Poecilia_latipinna
FBgn0030136RpS28b6875.000ENSPMEG00000002024rps286475.000Poecilia_mexicana
FBgn0030136RpS28b6875.000ENSPREG00000008776rps288375.000Poecilia_reticulata
FBgn0030136RpS28b9768.254ENSPPYG00000017517-9168.254Pongo_abelii
FBgn0030136RpS28b9779.365ENSPPYG00000002308-9179.365Pongo_abelii
FBgn0030136RpS28b9779.365ENSPCOG00000018363RPS289179.365Propithecus_coquereli
FBgn0030136RpS28b9780.952ENSPNYG00000003176rps289180.952Pundamilia_nyererei
FBgn0030136RpS28b9780.952ENSPNAG00000023640rps289180.952Pygocentrus_nattereri
FBgn0030136RpS28b9572.581ENSRNOG00000030242AABR07024115.19072.581Rattus_norvegicus
FBgn0030136RpS28b9776.190ENSRNOG00000046342LOC1003595039176.190Rattus_norvegicus
FBgn0030136RpS28b9779.365ENSRNOG00000042886Rps289179.365Rattus_norvegicus
FBgn0030136RpS28b9779.365ENSRBIG00000042335RPS289179.365Rhinopithecus_bieti
FBgn0030136RpS28b9779.365ENSRROG00000009415RPS289179.365Rhinopithecus_roxellana
FBgn0030136RpS28b9572.581YLR264WRPS28B9372.581Saccharomyces_cerevisiae
FBgn0030136RpS28b9572.581YOR167CRPS28A9372.581Saccharomyces_cerevisiae
FBgn0030136RpS28b9779.365ENSSBOG00000012561-9179.365Saimiri_boliviensis_boliviensis
FBgn0030136RpS28b9779.365ENSSBOG00000008426-9179.365Saimiri_boliviensis_boliviensis
FBgn0030136RpS28b6875.000ENSSFOG00015020198rps288375.000Scleropages_formosus
FBgn0030136RpS28b9780.952ENSSMAG00000005687rps289180.952Scophthalmus_maximus
FBgn0030136RpS28b6875.000ENSSDUG00000012719rps288375.000Seriola_dumerili
FBgn0030136RpS28b9780.952ENSSLDG00000021334rps289180.952Seriola_lalandi_dorsalis
FBgn0030136RpS28b9771.429ENSSARG00000006449-9171.429Sorex_araneus
FBgn0030136RpS28b9779.365ENSSPUG00000002186RPS289179.365Sphenodon_punctatus
FBgn0030136RpS28b9780.952ENSSPAG00000000028rps289180.952Stegastes_partitus
FBgn0030136RpS28b9761.194ENSSSCG00000037340-8961.194Sus_scrofa
FBgn0030136RpS28b9779.365ENSSSCG00000013597RPS289179.365Sus_scrofa
FBgn0030136RpS28b7878.431ENSTGUG00000000095RPS289378.431Taeniopygia_guttata
FBgn0030136RpS28b6870.455ENSTRUG00000009208rps288370.455Takifugu_rubripes
FBgn0030136RpS28b9777.778ENSTNIG00000011061rps289177.778Tetraodon_nigroviridis
FBgn0030136RpS28b8271.698ENSTBEG00000015227-9871.698Tupaia_belangeri
FBgn0030136RpS28b9755.556ENSUAMG00000008958-6555.556Ursus_americanus
FBgn0030136RpS28b9779.365ENSUAMG00000022329-6179.365Ursus_americanus
FBgn0030136RpS28b9779.365ENSUMAG00000014631RPS289179.365Ursus_maritimus
FBgn0030136RpS28b9779.365ENSUMAG00000000588-9179.365Ursus_maritimus
FBgn0030136RpS28b9779.365ENSVVUG00000025217RPS289179.365Vulpes_vulpes
FBgn0030136RpS28b9780.952ENSXETG00000021905rps28p99180.952Xenopus_tropicalis
FBgn0030136RpS28b6875.000ENSXCOG00000007160rps288375.000Xiphophorus_couchianus
FBgn0030136RpS28b6875.000ENSXMAG00000013950rps288375.000Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000028ribosomal small subunit assembly21873635.IBAProcess
GO:0002181cytoplasmic translation-ICProcess
GO:0002181cytoplasmic translation17927810.TASProcess
GO:0003735structural constituent of ribosome21873635.IBAFunction
GO:0003735structural constituent of ribosome-ISSFunction
GO:0003735structural constituent of ribosome17927810.TASFunction
GO:0006412translation-IEAProcess
GO:0022627cytosolic small ribosomal subunit21873635.IBAComponent
GO:0022627cytosolic small ribosomal subunit-ISSComponent
GO:0022627cytosolic small ribosomal subunit17927810.TASComponent
GO:0030490maturation of SSU-rRNA21873635.IBAProcess

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