EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0030246 (Gene tree)
Gene ID: 32021
Gene Symbol: CG1582
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: confidence
Strand: Minus strand
Length: 4556 bases
Position: chrX:10894747-10899302
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0073259	zf-CCCH	PF00642.24	2.5e-08	1	1
FBpp0308815	zf-CCCH	PF00642.24	2.5e-08	1	1
FBpp0073259	DEAD	PF00270.29	7.5e-08	1	1
FBpp0308815	DEAD	PF00270.29	7.5e-08	1	1
FBpp0073259	HA2	PF04408.23	9e-20	1	1
FBpp0308815	HA2	PF04408.23	9e-20	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27197210	The mRNA-bound proteome of the early fly embryo	IC & embryos	2016 Apr 28	Wessels HH	DOI: 10.1101/gr.200386.115

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0073403	-	4036	-	FBpp0073259	1288 (aa)	-	Q9VZ55
FBtr0339768	-	4184	-	FBpp0308815	1288 (aa)	-	A8IL83

Gene Model

Click here to download FBgn0030246's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0030246's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
FBgn0030246	CG1582	60	36.795	FBgn0002774	mle	76	36.795
FBgn0030246	CG1582	57	38.049	FBgn0086895	pea	50	38.049
FBgn0030246	CG1582	53	33.047	FBgn0052533	CG32533	53	33.047
FBgn0030246	CG1582	61	35.516	FBgn0032883	Rhau	82	34.757
FBgn0030246	CG1582	62	31.707	FBgn0030833	CG8915	74	32.073
FBgn0030246	CG1582	54	39.252	FBgn0032194	CG4901	88	39.252

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0030246	CG1582	90	41.334	ENSG00000163214	DHX57	99	44.006	Homo_sapiens
FBgn0030246	CG1582	87	48.655	ENSAPOG00000022824	dhx57	87	40.415	Acanthochromis_polyacanthus
FBgn0030246	CG1582	90	40.843	ENSAMEG00000016007	DHX57	87	40.905	Ailuropoda_melanoleuca
FBgn0030246	CG1582	86	48.202	ENSACIG00000010054	dhx57	93	41.095	Amphilophus_citrinellus
FBgn0030246	CG1582	86	48.991	ENSAOCG00000006095	dhx57	85	40.560	Amphiprion_ocellaris
FBgn0030246	CG1582	87	48.879	ENSAPEG00000015386	dhx57	93	40.813	Amphiprion_percula
FBgn0030246	CG1582	86	49.158	ENSATEG00000010145	dhx57	85	41.022	Anabas_testudineus
FBgn0030246	CG1582	99	40.326	ENSAPLG00000011333	DHX57	99	40.252	Anas_platyrhynchos
FBgn0030246	CG1582	93	40.685	ENSACAG00000006143	DHX57	94	39.741	Anolis_carolinensis
FBgn0030246	CG1582	69	40.721	ENSANAG00000020674	-	82	40.412	Aotus_nancymaae
FBgn0030246	CG1582	85	48.636	ENSACLG00000003064	dhx57	77	48.864	Astatotilapia_calliptera
FBgn0030246	CG1582	82	47.582	ENSAMXG00000002141	dhx57	89	40.243	Astyanax_mexicanus
FBgn0030246	CG1582	90	40.846	ENSBTAG00000014679	DHX57	87	40.946	Bos_taurus
FBgn0030246	CG1582	90	41.090	ENSCJAG00000015097	DHX57	87	41.109	Callithrix_jacchus
FBgn0030246	CG1582	90	40.876	ENSCAFG00000006228	DHX57	87	40.976	Canis_familiaris
FBgn0030246	CG1582	90	40.876	ENSCAFG00020022782	DHX57	98	40.359	Canis_lupus_dingo
FBgn0030246	CG1582	90	40.846	ENSCHIG00000017727	DHX57	89	40.946	Capra_hircus
FBgn0030246	CG1582	90	41.090	ENSTSYG00000003905	DHX57	87	41.306	Carlito_syrichta
FBgn0030246	CG1582	90	40.163	ENSCAPG00000010588	DHX57	88	40.325	Cavia_aperea
FBgn0030246	CG1582	90	41.363	ENSCPOG00000009155	DHX57	90	41.491	Cavia_porcellus
FBgn0030246	CG1582	90	41.090	ENSCCAG00000028659	DHX57	87	41.272	Cebus_capucinus
FBgn0030246	CG1582	67	46.636	ENSCATG00000030750	DHX57	87	39.886	Cercocebus_atys
FBgn0030246	CG1582	90	41.396	ENSCLAG00000005401	DHX57	90	41.430	Chinchilla_lanigera
FBgn0030246	CG1582	67	48.461	ENSCSAG00000012320	DHX57	87	41.109	Chlorocebus_sabaeus
FBgn0030246	CG1582	84	42.632	ENSCHOG00000004647	DHX57	82	42.632	Choloepus_hoffmanni
FBgn0030246	CG1582	90	42.358	ENSCPBG00000023598	DHX57	95	40.134	Chrysemys_picta_bellii
FBgn0030246	CG1582	90	41.009	ENSCANG00000039093	DHX57	87	41.191	Colobus_angolensis_palliatus
FBgn0030246	CG1582	90	41.809	ENSCGRG00001022501	Dhx57	90	41.272	Cricetulus_griseus_chok1gshd
FBgn0030246	CG1582	90	41.809	ENSCGRG00000006247	Dhx57	87	41.728	Cricetulus_griseus_crigri
FBgn0030246	CG1582	90	42.191	ENSCSEG00000011346	dhx57	93	42.390	Cynoglossus_semilaevis
FBgn0030246	CG1582	86	49.215	ENSCVAG00000011692	dhx57	93	42.147	Cyprinodon_variegatus
FBgn0030246	CG1582	86	49.550	ENSDARG00000057660	dhx57	78	49.550	Danio_rerio
FBgn0030246	CG1582	90	41.181	ENSDNOG00000016122	DHX57	87	40.972	Dasypus_novemcinctus
FBgn0030246	CG1582	87	41.457	ENSDORG00000013864	Dhx57	89	41.695	Dipodomys_ordii
FBgn0030246	CG1582	87	46.449	ENSEBUG00000009761	dhx57	77	46.734	Eptatretus_burgeri
FBgn0030246	CG1582	90	41.057	ENSEASG00005005539	DHX57	87	40.744	Equus_asinus_asinus
FBgn0030246	CG1582	89	41.172	ENSECAG00000018758	DHX57	85	40.853	Equus_caballus
FBgn0030246	CG1582	81	40.219	ENSEEUG00000004743	DHX57	80	40.340	Erinaceus_europaeus
FBgn0030246	CG1582	86	48.764	ENSELUG00000003961	dhx57	86	42.943	Esox_lucius
FBgn0030246	CG1582	88	48.161	ENSFCAG00000006258	DHX57	87	40.480	Felis_catus
FBgn0030246	CG1582	99	40.119	ENSFALG00000002367	DHX57	96	40.597	Ficedula_albicollis
FBgn0030246	CG1582	90	41.388	ENSFDAG00000009591	DHX57	94	41.707	Fukomys_damarensis
FBgn0030246	CG1582	80	47.743	ENSGMOG00000001839	dhx57	68	46.804	Gadus_morhua
FBgn0030246	CG1582	78	49.422	ENSGAFG00000017048	dhx57	75	49.422	Gambusia_affinis
FBgn0030246	CG1582	99	40.104	ENSGAGG00000008874	DHX57	88	42.395	Gopherus_agassizii
FBgn0030246	CG1582	90	41.272	ENSGGOG00000008187	DHX57	87	41.272	Gorilla_gorilla
FBgn0030246	CG1582	85	48.636	ENSHBUG00000004865	dhx57	77	48.864	Haplochromis_burtoni
FBgn0030246	CG1582	90	39.062	ENSHGLG00000015212	DHX57	90	39.062	Heterocephalus_glaber_female
FBgn0030246	CG1582	90	41.450	ENSHGLG00100004460	DHX57	90	41.531	Heterocephalus_glaber_male
FBgn0030246	CG1582	96	39.722	ENSHCOG00000012405	dhx57	99	39.443	Hippocampus_comes
FBgn0030246	CG1582	90	41.348	ENSIPUG00000002412	DHX57	96	40.015	Ictalurus_punctatus
FBgn0030246	CG1582	90	41.857	ENSSTOG00000020171	DHX57	90	41.633	Ictidomys_tridecemlineatus
FBgn0030246	CG1582	90	40.806	ENSJJAG00000023202	Dhx57	90	40.990	Jaculus_jaculus
FBgn0030246	CG1582	92	41.363	ENSKMAG00000021791	dhx57	93	41.946	Kryptolebias_marmoratus
FBgn0030246	CG1582	86	49.046	ENSLBEG00000028343	dhx57	86	40.635	Labrus_bergylta
FBgn0030246	CG1582	93	48.202	ENSLACG00000001344	DHX57	88	48.202	Latimeria_chalumnae
FBgn0030246	CG1582	90	42.152	ENSLOCG00000015774	dhx57	85	42.526	Lepisosteus_oculatus
FBgn0030246	CG1582	91	41.511	ENSLAFG00000002497	DHX57	99	47.963	Loxodonta_africana
FBgn0030246	CG1582	90	40.846	ENSMFAG00000040122	DHX57	87	41.028	Macaca_fascicularis
FBgn0030246	CG1582	90	40.846	ENSMMUG00000021066	DHX57	97	50.575	Macaca_mulatta
FBgn0030246	CG1582	90	40.846	ENSMNEG00000039994	DHX57	87	41.028	Macaca_nemestrina
FBgn0030246	CG1582	67	48.461	ENSMLEG00000029727	DHX57	87	41.191	Mandrillus_leucophaeus
FBgn0030246	CG1582	90	41.954	ENSMAMG00000006556	dhx57	87	41.605	Mastacembelus_armatus
FBgn0030246	CG1582	85	47.273	ENSMZEG00005011852	dhx57	89	40.307	Maylandia_zebra
FBgn0030246	CG1582	90	42.267	ENSMGAG00000007437	DHX57	94	40.299	Meleagris_gallopavo
FBgn0030246	CG1582	82	45.156	ENSMAUG00000019098	Dhx57	89	45.156	Mesocricetus_auratus
FBgn0030246	CG1582	90	41.416	ENSMICG00000028350	DHX57	86	41.444	Microcebus_murinus
FBgn0030246	CG1582	90	41.267	ENSMOCG00000015502	Dhx57	90	41.186	Microtus_ochrogaster
FBgn0030246	CG1582	87	47.178	ENSMMOG00000002496	dhx57	94	40.225	Mola_mola
FBgn0030246	CG1582	90	41.410	ENSMODG00000008743	DHX57	99	39.719	Monodelphis_domestica
FBgn0030246	CG1582	90	41.857	ENSMALG00000003902	dhx57	91	41.951	Monopterus_albus
FBgn0030246	CG1582	86	48.747	MGP_CAROLIEiJ_G0021904	Dhx57	90	41.633	Mus_caroli
FBgn0030246	CG1582	86	48.747	ENSMUSG00000035051	Dhx57	90	41.633	Mus_musculus
FBgn0030246	CG1582	90	41.343	MGP_PahariEiJ_G0020894	Dhx57	90	41.646	Mus_pahari
FBgn0030246	CG1582	86	48.747	MGP_SPRETEiJ_G0022820	Dhx57	90	41.796	Mus_spretus
FBgn0030246	CG1582	90	41.119	ENSMPUG00000010440	DHX57	87	40.924	Mustela_putorius_furo
FBgn0030246	CG1582	90	41.396	ENSMLUG00000014775	DHX57	87	41.234	Myotis_lucifugus
FBgn0030246	CG1582	90	41.416	ENSNGAG00000006882	Dhx57	90	41.368	Nannospalax_galili
FBgn0030246	CG1582	85	47.777	ENSNBRG00000000229	dhx57	77	47.777	Neolamprologus_brichardi
FBgn0030246	CG1582	90	41.009	ENSNLEG00000016369	DHX57	87	41.220	Nomascus_leucogenys
FBgn0030246	CG1582	56	63.415	ENSMEUG00000009322	-	57	63.415	Notamacropus_eugenii
FBgn0030246	CG1582	77	50.254	ENSOPRG00000010262	DHX57	86	39.784	Ochotona_princeps
FBgn0030246	CG1582	90	42.251	ENSODEG00000011626	DHX57	90	42.204	Octodon_degus
FBgn0030246	CG1582	85	48.413	ENSONIG00000016747	dhx57	85	40.096	Oreochromis_niloticus
FBgn0030246	CG1582	53	47.661	ENSOANG00000014981	-	97	35.674	Ornithorhynchus_anatinus
FBgn0030246	CG1582	90	41.334	ENSOCUG00000015602	DHX57	94	41.253	Oryctolagus_cuniculus
FBgn0030246	CG1582	86	48.148	ENSORLG00000010748	dhx57	85	41.129	Oryzias_latipes
FBgn0030246	CG1582	90	41.238	ENSORLG00020002106	dhx57	85	41.077	Oryzias_latipes_hni
FBgn0030246	CG1582	99	39.121	ENSOMEG00000013994	dhx57	94	39.080	Oryzias_melastigma
FBgn0030246	CG1582	90	41.153	ENSOGAG00000000118	DHX57	87	41.038	Otolemur_garnettii
FBgn0030246	CG1582	90	40.407	ENSOARG00000008640	DHX57	87	40.505	Ovis_aries
FBgn0030246	CG1582	90	41.497	ENSPPAG00000029117	DHX57	87	41.272	Pan_paniscus
FBgn0030246	CG1582	90	41.410	ENSPPRG00000003710	DHX57	87	41.382	Panthera_pardus
FBgn0030246	CG1582	90	41.410	ENSPTIG00000001824	DHX57	87	41.463	Panthera_tigris_altaica
FBgn0030246	CG1582	90	41.497	ENSPTRG00000011853	DHX57	87	41.272	Pan_troglodytes
FBgn0030246	CG1582	67	48.461	ENSPANG00000024244	DHX57	87	41.191	Papio_anubis
FBgn0030246	CG1582	87	50.621	ENSPKIG00000022587	dhx57	88	41.613	Paramormyrops_kingsleyae
FBgn0030246	CG1582	99	39.137	ENSPSIG00000016846	DHX57	96	39.328	Pelodiscus_sinensis
FBgn0030246	CG1582	77	47.815	ENSPMGG00000019136	dhx57	91	47.815	Periophthalmus_magnuspinnatus
FBgn0030246	CG1582	90	41.836	ENSPEMG00000013421	Dhx57	87	41.951	Peromyscus_maniculatus_bairdii
FBgn0030246	CG1582	62	36.636	ENSPMAG00000006354	dhx57	94	35.477	Petromyzon_marinus
FBgn0030246	CG1582	91	42.067	ENSPCIG00000020700	DHX57	87	41.941	Phascolarctos_cinereus
FBgn0030246	CG1582	90	41.714	ENSPFOG00000012729	dhx57	84	41.471	Poecilia_formosa
FBgn0030246	CG1582	90	42.177	ENSPLAG00000012656	dhx57	85	42.037	Poecilia_latipinna
FBgn0030246	CG1582	86	49.550	ENSPMEG00000022105	dhx57	92	41.519	Poecilia_mexicana
FBgn0030246	CG1582	86	49.212	ENSPREG00000009775	dhx57	92	41.795	Poecilia_reticulata
FBgn0030246	CG1582	90	40.033	ENSPPYG00000012478	DHX57	86	40.212	Pongo_abelii
FBgn0030246	CG1582	74	46.377	ENSPCAG00000002696	DHX57	71	46.377	Procavia_capensis
FBgn0030246	CG1582	90	40.521	ENSPCOG00000016267	DHX57	86	40.211	Propithecus_coquereli
FBgn0030246	CG1582	90	41.267	ENSPVAG00000012080	DHX57	87	41.005	Pteropus_vampyrus
FBgn0030246	CG1582	85	48.864	ENSPNYG00000006926	dhx57	77	48.864	Pundamilia_nyererei
FBgn0030246	CG1582	85	49.830	ENSPNAG00000030009	dhx57	85	49.830	Pygocentrus_nattereri
FBgn0030246	CG1582	90	41.388	ENSRNOG00000054272	Dhx57	94	42.122	Rattus_norvegicus
FBgn0030246	CG1582	90	41.009	ENSRBIG00000031743	DHX57	87	41.191	Rhinopithecus_bieti
FBgn0030246	CG1582	90	40.928	ENSRROG00000009988	DHX57	87	41.109	Rhinopithecus_roxellana
FBgn0030246	CG1582	90	41.032	ENSSBOG00000020579	DHX57	90	41.215	Saimiri_boliviensis_boliviensis
FBgn0030246	CG1582	86	48.245	ENSSHAG00000015628	DHX57	96	39.427	Sarcophilus_harrisii
FBgn0030246	CG1582	90	42.419	ENSSFOG00015007262	dhx57	93	42.292	Scleropages_formosus
FBgn0030246	CG1582	86	48.148	ENSSMAG00000019791	dhx57	89	41.036	Scophthalmus_maximus
FBgn0030246	CG1582	87	41.527	ENSSDUG00000009022	dhx57	87	42.275	Seriola_dumerili
FBgn0030246	CG1582	86	49.383	ENSSLDG00000006979	dhx57	92	42.097	Seriola_lalandi_dorsalis
FBgn0030246	CG1582	90	39.421	ENSSPUG00000006584	DHX57	96	39.008	Sphenodon_punctatus
FBgn0030246	CG1582	87	48.709	ENSSPAG00000015976	dhx57	93	40.702	Stegastes_partitus
FBgn0030246	CG1582	84	47.895	ENSSSCG00000008479	DHX57	86	42.675	Sus_scrofa
FBgn0030246	CG1582	90	42.382	ENSTGUG00000002076	-	97	40.707	Taeniopygia_guttata
FBgn0030246	CG1582	91	41.580	ENSTRUG00000008277	dhx57	85	41.580	Takifugu_rubripes
FBgn0030246	CG1582	87	49.607	ENSTNIG00000018527	dhx57	91	41.506	Tetraodon_nigroviridis
FBgn0030246	CG1582	86	45.496	ENSTBEG00000005067	DHX57	87	38.794	Tupaia_belangeri
FBgn0030246	CG1582	90	40.016	ENSTTRG00000014328	DHX57	87	39.919	Tursiops_truncatus
FBgn0030246	CG1582	90	40.957	ENSUAMG00000025059	DHX57	98	41.124	Ursus_americanus
FBgn0030246	CG1582	90	41.176	ENSUMAG00000013400	DHX57	98	41.176	Ursus_maritimus
FBgn0030246	CG1582	77	51.183	ENSVPAG00000003319	DHX57	74	51.183	Vicugna_pacos
FBgn0030246	CG1582	90	40.957	ENSVVUG00000018731	DHX57	87	41.057	Vulpes_vulpes
FBgn0030246	CG1582	99	37.158	ENSXETG00000031949	DHX57	99	37.232	Xenopus_tropicalis
FBgn0030246	CG1582	86	49.099	ENSXMAG00000004136	dhx57	84	41.399	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	21873635.	IBA	Function
GO:0003723	RNA binding	-	ISS	Function
GO:0004386	helicase activity	10908586.	ISS	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0034459	ATP-dependent 3'-5' RNA helicase activity	21873635.	IBA	Function
GO:0046872	metal ion binding	-	IEA	Function