EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0030336 (Gene tree)
Gene ID: 32135
Gene Symbol: CG1578
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Minus strand
Length: 8046 bases
Position: chrX:11808506-11816551
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0073444	Ribonuc_L-PSP	PF01042.21	1.4e-21	1	2
FBpp0073444	Ribonuc_L-PSP	PF01042.21	1.4e-21	2	2
FBpp0308797	Ribonuc_L-PSP	PF01042.21	1.4e-21	1	2
FBpp0308797	Ribonuc_L-PSP	PF01042.21	1.4e-21	2	2
FBpp0311370	Ribonuc_L-PSP	PF01042.21	1.4e-21	1	2
FBpp0311370	Ribonuc_L-PSP	PF01042.21	1.4e-21	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0345160	-	3741	-	FBpp0311370	901 (aa)	-	Q8MRI4
FBtr0073607	-	3667	-	FBpp0073444	901 (aa)	-	Q8MRI4
FBtr0339749	-	4512	-	FBpp0308797	901 (aa)	-	Q8MRI4

Gene Model

Click here to download FBgn0030336's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0030336's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0030336	CG1578	58	58.065	ENSAPOG00000011305	dph6	72	63.306	Acanthochromis_polyacanthus
FBgn0030336	CG1578	57	62.348	ENSATEG00000010892	dph6	74	62.348	Anabas_testudineus
FBgn0030336	CG1578	55	62.400	ENSACAG00000029596	DPH6	72	62.400	Anolis_carolinensis
FBgn0030336	CG1578	58	57.143	ENSACLG00000013133	dph6	85	57.143	Astatotilapia_calliptera
FBgn0030336	CG1578	60	57.706	ENSAMXG00000014741	dph6	90	61.811	Astyanax_mexicanus
FBgn0030336	CG1578	55	63.200	ENSCPBG00000023858	DPH6	72	63.200	Chrysemys_picta_bellii
FBgn0030336	CG1578	58	59.274	ENSCING00000009826	-	95	59.274	Ciona_intestinalis
FBgn0030336	CG1578	65	57.692	ENSELUG00000001148	dph6	88	56.296	Esox_lucius
FBgn0030336	CG1578	55	62.151	ENSFALG00000005671	DPH6	72	62.151	Ficedula_albicollis
FBgn0030336	CG1578	63	58.511	ENSFHEG00000020233	dph6	86	58.511	Fundulus_heteroclitus
FBgn0030336	CG1578	56	62.140	ENSGMOG00000009867	dph6	74	62.140	Gadus_morhua
FBgn0030336	CG1578	55	61.417	ENSGALG00000020438	DPH6	71	61.417	Gallus_gallus
FBgn0030336	CG1578	57	56.654	ENSGAFG00000019653	dph6	75	56.654	Gambusia_affinis
FBgn0030336	CG1578	60	55.944	ENSGACG00000010500	dph6	81	55.944	Gasterosteus_aculeatus
FBgn0030336	CG1578	55	62.400	ENSGAGG00000009638	DPH6	72	62.400	Gopherus_agassizii
FBgn0030336	CG1578	68	57.143	ENSHBUG00000017591	dph6	85	57.143	Haplochromis_burtoni
FBgn0030336	CG1578	59	57.348	ENSIPUG00000006675	dph6	77	57.348	Ictalurus_punctatus
FBgn0030336	CG1578	56	62.097	ENSLOCG00000012210	dph6	72	62.097	Lepisosteus_oculatus
FBgn0030336	CG1578	59	56.446	ENSMAMG00000005786	dph6	77	56.446	Mastacembelus_armatus
FBgn0030336	CG1578	58	57.143	ENSMZEG00005002494	dph6	85	57.143	Maylandia_zebra
FBgn0030336	CG1578	57	57.143	ENSONIG00000001400	dph6	86	57.143	Oreochromis_niloticus
FBgn0030336	CG1578	56	62.934	ENSORLG00000013143	dph6	92	57.746	Oryzias_latipes
FBgn0030336	CG1578	56	62.548	ENSORLG00020017769	dph6	74	62.548	Oryzias_latipes_hni
FBgn0030336	CG1578	61	57.746	ENSOMEG00000000356	dph6	82	57.746	Oryzias_melastigma
FBgn0030336	CG1578	55	62.800	ENSPFOG00000015094	dph6	76	58.065	Poecilia_formosa
FBgn0030336	CG1578	51	45.161	ENSPLAG00000021283	-	67	45.161	Poecilia_latipinna
FBgn0030336	CG1578	53	42.007	ENSPMEG00000004238	-	72	52.381	Poecilia_mexicana
FBgn0030336	CG1578	56	63.415	ENSPNAG00000008737	dph6	73	63.415	Pygocentrus_nattereri
FBgn0030336	CG1578	61	56.333	ENSSFOG00015010539	dph6	79	56.333	Scleropages_formosus
FBgn0030336	CG1578	60	56.098	ENSSMAG00000018800	dph6	78	56.098	Scophthalmus_maximus
FBgn0030336	CG1578	60	56.446	ENSSDUG00000015167	dph6	78	56.446	Seriola_dumerili
FBgn0030336	CG1578	60	56.446	ENSSLDG00000021120	dph6	78	56.446	Seriola_lalandi_dorsalis
FBgn0030336	CG1578	58	58.730	ENSSPUG00000008460	DPH6	73	60.669	Sphenodon_punctatus
FBgn0030336	CG1578	58	57.706	ENSSPAG00000015649	dph6	76	57.706	Stegastes_partitus
FBgn0030336	CG1578	60	57.840	ENSTRUG00000014191	dph6	78	57.840	Takifugu_rubripes
FBgn0030336	CG1578	55	62.500	ENSXETG00000012897	dph6	71	62.500	Xenopus_tropicalis
FBgn0030336	CG1578	59	58.781	ENSXMAG00000009590	dph6	76	58.781	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0017178	diphthine-ammonia ligase activity	21873635.	IBA	Function
GO:0017178	diphthine-ammonia ligase activity	-	ISS	Function
GO:0017183	peptidyl-diphthamide biosynthetic process from peptidyl-histidine	21873635.	IBA	Process
GO:0017183	peptidyl-diphthamide biosynthetic process from peptidyl-histidine	-	ISS	Process