EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0030364 (Gene tree)
Gene ID: 32167
Gene Symbol: Lsm12
Alias: -
Full Name: LSM12 homolog
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Plus strand
Length: 2080 bases
Position: chrX:12018640-12020719
Accession: FBgn0030364
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0073458	AD	PF09793.9	3.6e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0073621	-	1251	-	FBpp0073458	217 (aa)	-	Q9VYR0

Gene Model

Click here to download FBgn0030364's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0030364's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
FBgn0030364	Lsm12	76	31.429	FBgn0036057	CG14164	94	31.429

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0030364	Lsm12	93	33.990	ENSG00000161654	LSM12	83	33.133	Homo_sapiens
FBgn0030364	Lsm12	76	33.735	ENSAPOG00000007907	lsm12b	83	33.735	Acanthochromis_polyacanthus
FBgn0030364	Lsm12	76	31.765	ENSAMEG00000018321	LSM12	83	31.953	Ailuropoda_melanoleuca
FBgn0030364	Lsm12	76	33.735	ENSACIG00000008538	lsm12b	83	33.735	Amphilophus_citrinellus
FBgn0030364	Lsm12	76	33.735	ENSAOCG00000021847	lsm12b	72	33.735	Amphiprion_ocellaris
FBgn0030364	Lsm12	76	33.735	ENSAPEG00000002252	lsm12b	86	33.333	Amphiprion_percula
FBgn0030364	Lsm12	76	33.735	ENSATEG00000005705	lsm12b	83	33.735	Anabas_testudineus
FBgn0030364	Lsm12	78	34.682	ENSACAG00000004618	LSM12	84	33.133	Anolis_carolinensis
FBgn0030364	Lsm12	76	32.934	ENSANAG00000029011	LSM12	83	33.133	Aotus_nancymaae
FBgn0030364	Lsm12	76	33.735	ENSACLG00000026332	lsm12b	83	33.735	Astatotilapia_calliptera
FBgn0030364	Lsm12	76	35.329	ENSAMXG00000032952	lsm12b	83	35.542	Astyanax_mexicanus
FBgn0030364	Lsm12	80	34.483	ENSAMXG00000036117	lsm12a	75	34.940	Astyanax_mexicanus
FBgn0030364	Lsm12	76	32.934	ENSBTAG00000016252	LSM12	83	33.133	Bos_taurus
FBgn0030364	Lsm12	76	32.934	ENSCJAG00000048480	LSM12	83	33.133	Callithrix_jacchus
FBgn0030364	Lsm12	76	32.934	ENSCAFG00000014379	LSM12	76	33.133	Canis_familiaris
FBgn0030364	Lsm12	76	32.934	ENSCAFG00020012173	LSM12	83	33.133	Canis_lupus_dingo
FBgn0030364	Lsm12	76	32.934	ENSCHIG00000018175	LSM12	83	33.133	Capra_hircus
FBgn0030364	Lsm12	76	32.934	ENSTSYG00000036361	LSM12	83	33.133	Carlito_syrichta
FBgn0030364	Lsm12	76	32.335	ENSCPOG00000012860	LSM12	83	32.530	Cavia_porcellus
FBgn0030364	Lsm12	76	32.934	ENSCCAG00000032905	LSM12	83	33.133	Cebus_capucinus
FBgn0030364	Lsm12	76	32.934	ENSCATG00000030577	-	83	33.133	Cercocebus_atys
FBgn0030364	Lsm12	76	32.934	ENSCLAG00000015759	LSM12	83	33.133	Chinchilla_lanigera
FBgn0030364	Lsm12	76	32.934	ENSCSAG00000003486	LSM12	83	33.133	Chlorocebus_sabaeus
FBgn0030364	Lsm12	78	32.164	ENSCPBG00000027105	LSM12	84	32.530	Chrysemys_picta_bellii
FBgn0030364	Lsm12	94	33.495	ENSCANG00000043328	LSM12	83	33.133	Colobus_angolensis_palliatus
FBgn0030364	Lsm12	76	32.934	ENSCGRG00001002094	Lsm12	83	33.133	Cricetulus_griseus_chok1gshd
FBgn0030364	Lsm12	76	34.337	ENSCSEG00000008434	lsm12b	83	34.337	Cynoglossus_semilaevis
FBgn0030364	Lsm12	76	34.337	ENSCVAG00000008755	lsm12b	83	33.735	Cyprinodon_variegatus
FBgn0030364	Lsm12	76	34.940	ENSDARG00000109510	lsm12b	83	34.940	Danio_rerio
FBgn0030364	Lsm12	76	34.940	ENSDARG00000028848	lsm12a	83	34.940	Danio_rerio
FBgn0030364	Lsm12	76	32.934	ENSDNOG00000002418	LSM12	76	33.133	Dasypus_novemcinctus
FBgn0030364	Lsm12	76	32.934	ENSDORG00000016381	Lsm12	83	33.133	Dipodomys_ordii
FBgn0030364	Lsm12	76	32.335	ENSETEG00000008374	LSM12	83	32.530	Echinops_telfairi
FBgn0030364	Lsm12	59	34.109	ENSETEG00000011012	-	73	34.109	Echinops_telfairi
FBgn0030364	Lsm12	87	34.921	ENSEBUG00000016299	lsm12a	93	34.706	Eptatretus_burgeri
FBgn0030364	Lsm12	76	32.934	ENSEASG00005010155	LSM12	83	33.133	Equus_asinus_asinus
FBgn0030364	Lsm12	76	32.934	ENSECAG00000009071	LSM12	83	33.133	Equus_caballus
FBgn0030364	Lsm12	76	33.133	ENSELUG00000000256	-	83	33.133	Esox_lucius
FBgn0030364	Lsm12	76	32.530	ENSELUG00000015538	lsm12b	82	31.928	Esox_lucius
FBgn0030364	Lsm12	76	32.934	ENSFCAG00000037021	LSM12	83	33.133	Felis_catus
FBgn0030364	Lsm12	76	34.940	ENSFHEG00000019913	lsm12b	83	34.337	Fundulus_heteroclitus
FBgn0030364	Lsm12	63	30.657	ENSGMOG00000015449	lsm12b	84	30.657	Gadus_morhua
FBgn0030364	Lsm12	76	34.337	ENSGAFG00000011829	lsm12b	83	33.735	Gambusia_affinis
FBgn0030364	Lsm12	78	32.164	ENSGAGG00000021965	LSM12	84	32.530	Gopherus_agassizii
FBgn0030364	Lsm12	93	33.990	ENSGGOG00000010589	-	83	33.133	Gorilla_gorilla
FBgn0030364	Lsm12	74	34.568	ENSHBUG00000007667	lsm12b	70	34.568	Haplochromis_burtoni
FBgn0030364	Lsm12	76	32.934	ENSHGLG00000011411	LSM12	83	33.133	Heterocephalus_glaber_female
FBgn0030364	Lsm12	76	34.940	ENSHCOG00000002094	lsm12b	83	34.940	Hippocampus_comes
FBgn0030364	Lsm12	76	36.145	ENSIPUG00000014800	lsm12	83	36.145	Ictalurus_punctatus
FBgn0030364	Lsm12	76	36.145	ENSIPUG00000008936	lsm12a	83	36.145	Ictalurus_punctatus
FBgn0030364	Lsm12	76	32.934	ENSSTOG00000007403	LSM12	83	33.133	Ictidomys_tridecemlineatus
FBgn0030364	Lsm12	63	31.387	ENSJJAG00000014652	-	80	31.387	Jaculus_jaculus
FBgn0030364	Lsm12	76	32.934	ENSJJAG00000004364	-	83	33.133	Jaculus_jaculus
FBgn0030364	Lsm12	76	30.357	ENSJJAG00000011793	-	85	30.539	Jaculus_jaculus
FBgn0030364	Lsm12	84	32.609	ENSKMAG00000007704	lsm12b	53	33.951	Kryptolebias_marmoratus
FBgn0030364	Lsm12	76	34.337	ENSLBEG00000027999	lsm12b	83	34.337	Labrus_bergylta
FBgn0030364	Lsm12	78	32.749	ENSLACG00000015981	LSM12	84	33.133	Latimeria_chalumnae
FBgn0030364	Lsm12	76	33.133	ENSLOCG00000013079	lsm12b	82	33.133	Lepisosteus_oculatus
FBgn0030364	Lsm12	76	32.934	ENSLAFG00000005202	LSM12	83	33.133	Loxodonta_africana
FBgn0030364	Lsm12	94	33.010	ENSMFAG00000031376	LSM12	83	33.133	Macaca_fascicularis
FBgn0030364	Lsm12	94	33.495	ENSMMUG00000006804	LSM12	83	33.133	Macaca_mulatta
FBgn0030364	Lsm12	94	33.495	ENSMNEG00000030594	-	83	33.133	Macaca_nemestrina
FBgn0030364	Lsm12	76	32.934	ENSMLEG00000039934	LSM12	83	33.133	Mandrillus_leucophaeus
FBgn0030364	Lsm12	76	33.735	ENSMAMG00000004279	lsm12b	83	33.735	Mastacembelus_armatus
FBgn0030364	Lsm12	76	33.735	ENSMZEG00005005754	lsm12b	83	33.735	Maylandia_zebra
FBgn0030364	Lsm12	76	32.934	ENSMICG00000037219	LSM12	83	33.133	Microcebus_murinus
FBgn0030364	Lsm12	76	32.934	ENSMOCG00000019878	-	83	33.133	Microtus_ochrogaster
FBgn0030364	Lsm12	76	33.133	ENSMMOG00000020848	lsm12b	83	33.133	Mola_mola
FBgn0030364	Lsm12	76	33.735	ENSMALG00000007578	lsm12b	83	33.735	Monopterus_albus
FBgn0030364	Lsm12	76	32.934	MGP_CAROLIEiJ_G0017241	Lsm12	83	33.133	Mus_caroli
FBgn0030364	Lsm12	76	32.934	ENSMUSG00000020922	Lsm12	83	33.133	Mus_musculus
FBgn0030364	Lsm12	78	30.270	MGP_PahariEiJ_G0018371	Lsm12	84	30.939	Mus_pahari
FBgn0030364	Lsm12	76	32.934	MGP_SPRETEiJ_G0018084	Lsm12	83	33.133	Mus_spretus
FBgn0030364	Lsm12	76	32.934	ENSMLUG00000006391	LSM12	83	33.133	Myotis_lucifugus
FBgn0030364	Lsm12	76	32.934	ENSNGAG00000001870	Lsm12	83	33.133	Nannospalax_galili
FBgn0030364	Lsm12	76	33.735	ENSNBRG00000006266	lsm12b	83	33.735	Neolamprologus_brichardi
FBgn0030364	Lsm12	93	33.990	ENSNLEG00000005580	-	83	33.133	Nomascus_leucogenys
FBgn0030364	Lsm12	66	36.111	ENSMEUG00000007501	-	86	36.111	Notamacropus_eugenii
FBgn0030364	Lsm12	76	32.934	ENSOPRG00000008552	LSM12	83	33.133	Ochotona_princeps
FBgn0030364	Lsm12	76	32.934	ENSODEG00000017998	-	83	33.133	Octodon_degus
FBgn0030364	Lsm12	85	30.882	ENSODEG00000007886	-	53	34.247	Octodon_degus
FBgn0030364	Lsm12	76	33.735	ENSONIG00000007933	lsm12b	83	33.735	Oreochromis_niloticus
FBgn0030364	Lsm12	76	31.765	ENSOCUG00000008566	-	83	31.953	Oryctolagus_cuniculus
FBgn0030364	Lsm12	76	31.325	ENSOCUG00000024823	-	84	31.325	Oryctolagus_cuniculus
FBgn0030364	Lsm12	76	31.928	ENSOCUG00000021254	-	84	31.928	Oryctolagus_cuniculus
FBgn0030364	Lsm12	76	33.735	ENSOCUG00000027889	-	84	33.735	Oryctolagus_cuniculus
FBgn0030364	Lsm12	76	33.735	ENSORLG00000011310	lsm12b	83	33.735	Oryzias_latipes
FBgn0030364	Lsm12	76	33.735	ENSORLG00020002060	lsm12b	76	33.735	Oryzias_latipes_hni
FBgn0030364	Lsm12	76	33.735	ENSORLG00015001647	lsm12b	76	33.735	Oryzias_latipes_hsok
FBgn0030364	Lsm12	76	33.735	ENSOMEG00000006184	lsm12b	76	33.735	Oryzias_melastigma
FBgn0030364	Lsm12	76	32.934	ENSOGAG00000010489	LSM12	83	33.133	Otolemur_garnettii
FBgn0030364	Lsm12	78	30.682	ENSOARG00000006589	LSM12	84	31.395	Ovis_aries
FBgn0030364	Lsm12	76	32.934	ENSPPRG00000023420	LSM12	83	33.133	Panthera_pardus
FBgn0030364	Lsm12	93	33.990	ENSPTRG00000009261	LSM12	83	33.133	Pan_troglodytes
FBgn0030364	Lsm12	94	34.300	ENSPANG00000021315	-	83	33.133	Papio_anubis
FBgn0030364	Lsm12	76	34.337	ENSPKIG00000021058	lsm12b	83	34.337	Paramormyrops_kingsleyae
FBgn0030364	Lsm12	80	33.333	ENSPKIG00000017932	-	83	33.735	Paramormyrops_kingsleyae
FBgn0030364	Lsm12	76	33.735	ENSPMGG00000021344	lsm12b	83	33.735	Periophthalmus_magnuspinnatus
FBgn0030364	Lsm12	76	32.934	ENSPEMG00000012199	Lsm12	83	33.133	Peromyscus_maniculatus_bairdii
FBgn0030364	Lsm12	79	36.047	ENSPMAG00000005461	lsm12a	94	35.714	Petromyzon_marinus
FBgn0030364	Lsm12	76	32.335	ENSPCIG00000020244	LSM12	83	32.530	Phascolarctos_cinereus
FBgn0030364	Lsm12	76	34.940	ENSPFOG00000015930	lsm12b	83	34.337	Poecilia_formosa
FBgn0030364	Lsm12	76	34.940	ENSPLAG00000021089	lsm12b	83	34.337	Poecilia_latipinna
FBgn0030364	Lsm12	76	34.940	ENSPMEG00000012961	lsm12b	83	34.337	Poecilia_mexicana
FBgn0030364	Lsm12	69	32.000	ENSPREG00000010236	lsm12b	81	32.000	Poecilia_reticulata
FBgn0030364	Lsm12	76	32.934	ENSPPYG00000008344	LSM12	83	33.133	Pongo_abelii
FBgn0030364	Lsm12	66	36.111	ENSPCAG00000008790	LSM12	89	36.111	Procavia_capensis
FBgn0030364	Lsm12	76	32.934	ENSPCOG00000027951	LSM12	83	33.133	Propithecus_coquereli
FBgn0030364	Lsm12	76	32.934	ENSPVAG00000013706	LSM12	83	33.133	Pteropus_vampyrus
FBgn0030364	Lsm12	76	33.735	ENSPNYG00000003386	lsm12b	83	33.735	Pundamilia_nyererei
FBgn0030364	Lsm12	80	36.207	ENSPNAG00000018435	lsm12a	83	36.747	Pygocentrus_nattereri
FBgn0030364	Lsm12	76	34.337	ENSPNAG00000004186	lsm12b	83	34.337	Pygocentrus_nattereri
FBgn0030364	Lsm12	76	32.934	ENSRNOG00000020894	Lsm12	83	33.133	Rattus_norvegicus
FBgn0030364	Lsm12	94	33.495	ENSRBIG00000027910	LSM12	83	33.133	Rhinopithecus_bieti
FBgn0030364	Lsm12	94	33.495	ENSRROG00000045530	-	91	33.333	Rhinopithecus_roxellana
FBgn0030364	Lsm12	76	32.934	ENSSBOG00000025310	LSM12	83	33.133	Saimiri_boliviensis_boliviensis
FBgn0030364	Lsm12	76	34.337	ENSSFOG00015009612	lsm12	83	34.337	Scleropages_formosus
FBgn0030364	Lsm12	76	35.542	ENSSFOG00015020392	lsm12a	83	35.542	Scleropages_formosus
FBgn0030364	Lsm12	76	33.133	ENSSMAG00000008089	lsm12b	83	33.133	Scophthalmus_maximus
FBgn0030364	Lsm12	76	33.735	ENSSDUG00000012711	lsm12b	83	33.735	Seriola_dumerili
FBgn0030364	Lsm12	76	33.735	ENSSLDG00000007404	lsm12b	83	33.735	Seriola_lalandi_dorsalis
FBgn0030364	Lsm12	78	32.749	ENSSPUG00000011984	LSM12	84	33.133	Sphenodon_punctatus
FBgn0030364	Lsm12	76	33.939	ENSSPAG00000017058	lsm12b	83	33.735	Stegastes_partitus
FBgn0030364	Lsm12	76	32.934	ENSSSCG00000032394	LSM12	83	33.133	Sus_scrofa
FBgn0030364	Lsm12	76	33.133	ENSTRUG00000007121	lsm12b	83	33.133	Takifugu_rubripes
FBgn0030364	Lsm12	76	33.728	ENSTNIG00000014436	lsm12b	83	33.728	Tetraodon_nigroviridis
FBgn0030364	Lsm12	76	32.934	ENSTBEG00000012523	-	83	33.133	Tupaia_belangeri
FBgn0030364	Lsm12	76	32.934	ENSTBEG00000012392	-	84	32.934	Tupaia_belangeri
FBgn0030364	Lsm12	76	32.934	ENSTTRG00000010433	LSM12	83	33.133	Tursiops_truncatus
FBgn0030364	Lsm12	76	32.934	ENSUAMG00000006313	LSM12	83	33.133	Ursus_americanus
FBgn0030364	Lsm12	76	31.138	ENSVPAG00000011145	LSM12	83	31.325	Vicugna_pacos
FBgn0030364	Lsm12	76	32.934	ENSVVUG00000017581	LSM12	83	33.133	Vulpes_vulpes
FBgn0030364	Lsm12	76	34.337	ENSXCOG00000003994	lsm12b	83	33.735	Xiphophorus_couchianus
FBgn0030364	Lsm12	76	34.337	ENSXMAG00000020950	lsm12b	83	33.735	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003674	molecular_function	-	ND	Function
GO:0005634	nucleus	-	ISS	Component
GO:0016070	RNA metabolic process	21873635.	IBA	Process
GO:0016070	RNA metabolic process	-	ISS	Process