EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0030468 (Gene tree)
Gene ID: 32282
Gene Symbol: CG1622
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Plus strand
Length: 2829 bases
Position: chrX:13297082-13299910
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0073588	PRP38	PF03371.15	6e-56	1	1
FBpp0302613	PRP38	PF03371.15	3.4e-47	1	1
FBpp0308968	PRP38	PF03371.15	6e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0073757	-	1682	-	FBpp0073588	398 (aa)	-	E8NH69
FBtr0339945	-	1987	-	FBpp0308968	141 (aa)	-	X2JF51
FBtr0310465	-	1693	-	FBpp0302613	178 (aa)	-	M9PHQ4

Gene Model

Click here to download FBgn0030468's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0030468's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0030468	CG1622	93	70.229	ENSACIG00000016459	-	85	73.469	Amphilophus_citrinellus
FBgn0030468	CG1622	88	57.962	WBGene00022434	Y108G3AL.2	62	55.882	Caenorhabditis_elegans
FBgn0030468	CG1622	88	73.718	ENSCSAVG00000009443	-	69	74.332	Ciona_savignyi
FBgn0030468	CG1622	93	70.229	ENSCVAG00000005543	-	75	71.154	Cyprinodon_variegatus
FBgn0030468	CG1622	89	75.316	ENSMODG00000002350	-	65	72.000	Monodelphis_domestica
FBgn0030468	CG1622	93	70.229	ENSNBRG00000019221	-	87	73.469	Neolamprologus_brichardi
FBgn0030468	CG1622	93	70.229	ENSORLG00000015621	-	90	70.513	Oryzias_latipes
FBgn0030468	CG1622	93	70.229	ENSORLG00020016276	-	90	70.513	Oryzias_latipes_hni
FBgn0030468	CG1622	93	70.229	ENSORLG00015016270	-	76	70.513	Oryzias_latipes_hsok
FBgn0030468	CG1622	93	70.229	ENSOMEG00000022050	-	91	70.513	Oryzias_melastigma
FBgn0030468	CG1622	93	70.229	ENSPMGG00000017585	-	91	73.469	Periophthalmus_magnuspinnatus
FBgn0030468	CG1622	94	68.613	ENSPMAG00000007150	-	91	69.231	Petromyzon_marinus
FBgn0030468	CG1622	89	75.316	ENSPFOG00000004025	-	83	71.154	Poecilia_formosa
FBgn0030468	CG1622	89	75.316	ENSPREG00000015599	-	85	71.154	Poecilia_reticulata
FBgn0030468	CG1622	88	64.516	ENSSFOG00015004405	-	89	59.394	Scleropages_formosus
FBgn0030468	CG1622	89	75.316	ENSSFOG00015011251	-	77	74.830	Scleropages_formosus
FBgn0030468	CG1622	93	70.229	ENSSMAG00000001781	-	83	71.711	Scophthalmus_maximus
FBgn0030468	CG1622	93	70.229	ENSSDUG00000016574	-	85	69.872	Seriola_dumerili
FBgn0030468	CG1622	93	70.229	ENSSLDG00000023487	-	85	69.872	Seriola_lalandi_dorsalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000398	mRNA splicing, via spliceosome	18981222.	IC	Process
GO:0071011	precatalytic spliceosome	18981222.	HDA	Component
GO:0071011	precatalytic spliceosome	21873635.	IBA	Component