EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0030474 (Gene tree)
Gene ID: 32288
Gene Symbol: CG15747
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Plus strand
Length: 2692 bases
Position: chrX:13338318-13341009
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0073597	DUF2040	PF09745.9	2.7e-35	1	1
FBpp0312198	DUF2040	PF09745.9	2.7e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0073766	-	2626	-	FBpp0073597	387 (aa)	-	Q9VYE3
FBtr0346618	-	2536	-	FBpp0312198	387 (aa)	-	Q8MYY9

Gene Model

Click here to download FBgn0030474's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0030474's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0030474	CG15747	75	36.000	ENSG00000126653	NSRP1	88	46.154	Homo_sapiens
FBgn0030474	CG15747	50	40.594	ENSAOCG00000011727	nsrp1	54	40.686	Amphiprion_ocellaris
FBgn0030474	CG15747	51	33.971	ENSCSAVG00000011750	-	96	33.971	Ciona_savignyi
FBgn0030474	CG15747	60	40.161	ENSGMOG00000007152	nsrp1	54	41.434	Gadus_morhua
FBgn0030474	CG15747	61	37.324	ENSGAFG00000000710	nsrp1	55	37.143	Gambusia_affinis
FBgn0030474	CG15747	51	42.574	ENSHCOG00000009930	nsrp1	50	42.574	Hippocampus_comes
FBgn0030474	CG15747	74	34.932	ENSMGAG00000006240	NSRP1	55	30.857	Meleagris_gallopavo
FBgn0030474	CG15747	51	42.029	ENSMODG00000009868	NSRP1	50	34.576	Monodelphis_domestica
FBgn0030474	CG15747	51	43.204	MGP_CAROLIEiJ_G0016769	Nsrp1	95	38.043	Mus_caroli
FBgn0030474	CG15747	51	43.689	ENSMUSG00000037958	Nsrp1	95	39.130	Mus_musculus
FBgn0030474	CG15747	51	43.434	MGP_PahariEiJ_G0017906	Nsrp1	95	38.636	Mus_pahari
FBgn0030474	CG15747	51	43.689	MGP_SPRETEiJ_G0017612	-	93	43.541	Mus_spretus
FBgn0030474	CG15747	73	35.294	ENSNBRG00000009326	nsrp1	74	38.430	Neolamprologus_brichardi
FBgn0030474	CG15747	64	36.486	ENSPFOG00000011548	nsrp1	55	37.143	Poecilia_formosa
FBgn0030474	CG15747	61	37.324	ENSPLAG00000005053	nsrp1	55	37.143	Poecilia_latipinna
FBgn0030474	CG15747	64	36.824	ENSPMEG00000013288	nsrp1	55	37.500	Poecilia_mexicana
FBgn0030474	CG15747	61	36.232	ENSSPAG00000002693	nsrp1	55	36.101	Stegastes_partitus
FBgn0030474	CG15747	58	39.316	ENSTNIG00000016161	nsrp1	66	40.000	Tetraodon_nigroviridis
FBgn0030474	CG15747	64	36.700	ENSXMAG00000029464	nsrp1	55	37.367	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000398	mRNA splicing, via spliceosome	18981222.	IC	Process
GO:0071011	precatalytic spliceosome	18981222.	HDA	Component
GO:0071013	catalytic step 2 spliceosome	18981222.	HDA	Component