EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0030687 (Gene tree)
Gene ID: 32524
Gene Symbol: CG17209
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Plus strand
Length: 6559 bases
Position: chrX:15762956-15769514
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0290035	RNA_pol_Rpb1_5	PF04998.17	1e-89	1	1
FBpp0290035	RNA_pol_Rpb1_4	PF05000.17	1.4e-29	1	1
FBpp0290035	RNA_pol_Rpb1_2	PF00623.20	1.2e-73	1	1
FBpp0290035	RNA_pol_Rpb1_3	PF04983.18	8.1e-38	1	1
FBpp0290035	RNA_pol_Rpb1_1	PF04997.12	4.3e-82	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0300811	-	4420	-	FBpp0290035	1383 (aa)	-	A2VEV4

Gene Model

Click here to download FBgn0030687's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0030687's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
FBgn0030687	CG17209	76	37.190	FBgn0019938	RpI1	74	31.122
FBgn0030687	CG17209	92	37.935	FBgn0003277	RpII215	69	37.935

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0030687	CG17209	99	57.308	ENSG00000148606	POLR3A	95	67.368	Homo_sapiens
FBgn0030687	CG17209	62	58.420	ENSAPOG00000022727	polr3a	99	58.420	Acanthochromis_polyacanthus
FBgn0030687	CG17209	99	57.256	ENSAMEG00000017801	POLR3A	99	57.256	Ailuropoda_melanoleuca
FBgn0030687	CG17209	93	56.495	ENSACIG00000024504	polr3a	97	56.495	Amphilophus_citrinellus
FBgn0030687	CG17209	99	55.790	ENSAOCG00000003949	-	99	55.790	Amphiprion_ocellaris
FBgn0030687	CG17209	99	57.143	ENSAOCG00000002071	polr3a	99	57.143	Amphiprion_ocellaris
FBgn0030687	CG17209	99	57.143	ENSAPEG00000013351	polr3a	99	57.143	Amphiprion_percula
FBgn0030687	CG17209	99	56.729	ENSAPEG00000001966	-	99	56.729	Amphiprion_percula
FBgn0030687	CG17209	99	57.164	ENSATEG00000023277	polr3a	99	57.164	Anabas_testudineus
FBgn0030687	CG17209	98	57.498	ENSAPLG00000015878	POLR3A	98	57.498	Anas_platyrhynchos
FBgn0030687	CG17209	93	55.979	ENSACAG00000007985	POLR3A	99	55.903	Anolis_carolinensis
FBgn0030687	CG17209	99	54.953	ENSANAG00000028922	POLR3A	99	54.953	Aotus_nancymaae
FBgn0030687	CG17209	99	56.802	ENSACLG00000005914	polr3a	99	56.802	Astatotilapia_calliptera
FBgn0030687	CG17209	99	53.935	ENSAMXG00000018852	polr3a	99	53.935	Astyanax_mexicanus
FBgn0030687	CG17209	99	57.453	ENSBTAG00000013259	POLR3A	99	57.453	Bos_taurus
FBgn0030687	CG17209	99	51.443	WBGene00004411	rpc-1	99	51.443	Caenorhabditis_elegans
FBgn0030687	CG17209	99	57.308	ENSCJAG00000001015	POLR3A	99	57.308	Callithrix_jacchus
FBgn0030687	CG17209	99	57.236	ENSCAFG00000015546	POLR3A	99	57.236	Canis_familiaris
FBgn0030687	CG17209	99	57.236	ENSCAFG00020014711	POLR3A	99	57.236	Canis_lupus_dingo
FBgn0030687	CG17209	99	57.670	ENSCHIG00000000352	POLR3A	99	57.670	Capra_hircus
FBgn0030687	CG17209	99	57.308	ENSTSYG00000006671	POLR3A	99	57.308	Carlito_syrichta
FBgn0030687	CG17209	98	57.352	ENSCAPG00000016031	POLR3A	99	57.352	Cavia_aperea
FBgn0030687	CG17209	99	57.381	ENSCPOG00000022387	POLR3A	99	57.381	Cavia_porcellus
FBgn0030687	CG17209	99	56.967	ENSCCAG00000032995	POLR3A	99	56.967	Cebus_capucinus
FBgn0030687	CG17209	99	57.308	ENSCATG00000035842	POLR3A	99	57.308	Cercocebus_atys
FBgn0030687	CG17209	99	57.525	ENSCLAG00000009629	POLR3A	99	57.525	Chinchilla_lanigera
FBgn0030687	CG17209	99	57.308	ENSCSAG00000009292	POLR3A	99	57.308	Chlorocebus_sabaeus
FBgn0030687	CG17209	79	52.805	ENSCHOG00000008368	POLR3A	93	52.805	Choloepus_hoffmanni
FBgn0030687	CG17209	99	57.670	ENSCPBG00000002079	POLR3A	99	57.670	Chrysemys_picta_bellii
FBgn0030687	CG17209	98	55.434	ENSCSAVG00000009925	-	98	55.434	Ciona_savignyi
FBgn0030687	CG17209	85	54.518	ENSCANG00000041071	POLR3A	94	60.526	Colobus_angolensis_palliatus
FBgn0030687	CG17209	79	61.135	ENSCGRG00001015599	-	94	61.135	Cricetulus_griseus_chok1gshd
FBgn0030687	CG17209	80	64.835	ENSCGRG00000001019	Polr3a	95	64.835	Cricetulus_griseus_crigri
FBgn0030687	CG17209	99	57.164	ENSCSEG00000016653	polr3a	99	57.164	Cynoglossus_semilaevis
FBgn0030687	CG17209	99	57.164	ENSCVAG00000023049	polr3a	99	57.164	Cyprinodon_variegatus
FBgn0030687	CG17209	99	56.606	ENSDARG00000102569	polr3a	99	56.606	Danio_rerio
FBgn0030687	CG17209	99	57.256	ENSDNOG00000010194	POLR3A	99	57.256	Dasypus_novemcinctus
FBgn0030687	CG17209	99	57.381	ENSDORG00000000184	Polr3a	99	57.381	Dipodomys_ordii
FBgn0030687	CG17209	91	47.973	ENSETEG00000007477	POLR3A	92	47.973	Echinops_telfairi
FBgn0030687	CG17209	59	58.837	ENSEBUG00000013761	polr3a	98	58.837	Eptatretus_burgeri
FBgn0030687	CG17209	99	57.236	ENSEASG00005023053	POLR3A	99	57.236	Equus_asinus_asinus
FBgn0030687	CG17209	96	57.515	ENSECAG00000019416	POLR3A	99	57.680	Equus_caballus
FBgn0030687	CG17209	96	55.216	ENSEEUG00000001774	POLR3A	99	55.216	Erinaceus_europaeus
FBgn0030687	CG17209	99	55.523	ENSELUG00000014016	polr3a	99	55.523	Esox_lucius
FBgn0030687	CG17209	99	57.308	ENSFCAG00000000843	POLR3A	99	57.308	Felis_catus
FBgn0030687	CG17209	99	57.484	ENSFALG00000006913	POLR3A	99	57.484	Ficedula_albicollis
FBgn0030687	CG17209	99	57.453	ENSFDAG00000007813	POLR3A	99	57.453	Fukomys_damarensis
FBgn0030687	CG17209	92	60.531	ENSFHEG00000011922	polr3a	97	60.531	Fundulus_heteroclitus
FBgn0030687	CG17209	99	55.866	ENSGMOG00000000291	polr3a	99	55.866	Gadus_morhua
FBgn0030687	CG17209	99	57.453	ENSGALG00000004947	POLR3A	99	57.453	Gallus_gallus
FBgn0030687	CG17209	99	57.091	ENSGAFG00000005112	polr3a	99	57.091	Gambusia_affinis
FBgn0030687	CG17209	99	56.484	ENSGACG00000002304	polr3a	99	56.484	Gasterosteus_aculeatus
FBgn0030687	CG17209	95	57.444	ENSGAGG00000010386	POLR3A	99	57.444	Gopherus_agassizii
FBgn0030687	CG17209	98	56.693	ENSGGOG00000027729	POLR3A	99	59.622	Gorilla_gorilla
FBgn0030687	CG17209	99	56.802	ENSHBUG00000018098	polr3a	99	56.802	Haplochromis_burtoni
FBgn0030687	CG17209	99	57.381	ENSHGLG00000017899	POLR3A	99	57.381	Heterocephalus_glaber_female
FBgn0030687	CG17209	99	57.381	ENSHGLG00100008483	POLR3A	99	57.381	Heterocephalus_glaber_male
FBgn0030687	CG17209	98	57.257	ENSHCOG00000001075	polr3a	98	57.257	Hippocampus_comes
FBgn0030687	CG17209	99	57.381	ENSSTOG00000012983	POLR3A	99	57.381	Ictidomys_tridecemlineatus
FBgn0030687	CG17209	99	57.061	ENSKMAG00000015290	polr3a	99	57.061	Kryptolebias_marmoratus
FBgn0030687	CG17209	99	56.245	ENSLBEG00000017214	polr3a	99	56.245	Labrus_bergylta
FBgn0030687	CG17209	97	56.329	ENSLACG00000018557	POLR3A	99	56.454	Latimeria_chalumnae
FBgn0030687	CG17209	99	56.606	ENSLOCG00000004942	polr3a	99	56.606	Lepisosteus_oculatus
FBgn0030687	CG17209	99	56.471	ENSLAFG00000016719	POLR3A	99	56.471	Loxodonta_africana
FBgn0030687	CG17209	99	57.381	ENSMFAG00000032218	POLR3A	99	57.381	Macaca_fascicularis
FBgn0030687	CG17209	99	57.381	ENSMMUG00000005514	POLR3A	99	57.381	Macaca_mulatta
FBgn0030687	CG17209	98	54.414	ENSMNEG00000035163	POLR3A	98	58.467	Macaca_nemestrina
FBgn0030687	CG17209	99	53.829	ENSMLEG00000030014	POLR3A	94	60.526	Mandrillus_leucophaeus
FBgn0030687	CG17209	99	56.679	ENSMAMG00000017497	polr3a	99	56.679	Mastacembelus_armatus
FBgn0030687	CG17209	99	56.802	ENSMZEG00005000576	polr3a	99	56.802	Maylandia_zebra
FBgn0030687	CG17209	99	46.193	ENSMGAG00000005713	-	99	46.193	Meleagris_gallopavo
FBgn0030687	CG17209	99	56.368	ENSMAUG00000016247	Polr3a	99	56.368	Mesocricetus_auratus
FBgn0030687	CG17209	99	57.236	ENSMICG00000005937	POLR3A	99	59.737	Microcebus_murinus
FBgn0030687	CG17209	99	57.091	ENSMOCG00000012185	Polr3a	99	57.091	Microtus_ochrogaster
FBgn0030687	CG17209	99	56.453	ENSMMOG00000013822	polr3a	99	56.453	Mola_mola
FBgn0030687	CG17209	99	57.236	ENSMODG00000001036	POLR3A	99	57.236	Monodelphis_domestica
FBgn0030687	CG17209	99	56.628	ENSMALG00000001249	polr3a	99	56.628	Monopterus_albus
FBgn0030687	CG17209	99	57.236	MGP_CAROLIEiJ_G0019016	Polr3a	99	57.236	Mus_caroli
FBgn0030687	CG17209	99	57.236	ENSMUSG00000025280	Polr3a	98	58.842	Mus_musculus
FBgn0030687	CG17209	99	57.236	MGP_PahariEiJ_G0030029	Polr3a	99	57.236	Mus_pahari
FBgn0030687	CG17209	99	55.499	MGP_SPRETEiJ_G0019894	Polr3a	93	69.828	Mus_spretus
FBgn0030687	CG17209	99	56.887	ENSMPUG00000003790	POLR3A	99	56.887	Mustela_putorius_furo
FBgn0030687	CG17209	99	56.946	ENSMLUG00000011522	POLR3A	99	56.946	Myotis_lucifugus
FBgn0030687	CG17209	99	56.358	ENSNGAG00000015863	Polr3a	99	56.358	Nannospalax_galili
FBgn0030687	CG17209	99	56.534	ENSNBRG00000014262	polr3a	99	56.534	Neolamprologus_brichardi
FBgn0030687	CG17209	86	55.061	ENSNLEG00000010501	POLR3A	90	55.061	Nomascus_leucogenys
FBgn0030687	CG17209	98	49.744	ENSMEUG00000012446	POLR3A	99	49.744	Notamacropus_eugenii
FBgn0030687	CG17209	95	57.186	ENSOPRG00000001880	-	95	57.186	Ochotona_princeps
FBgn0030687	CG17209	99	57.164	ENSODEG00000015146	POLR3A	99	57.164	Octodon_degus
FBgn0030687	CG17209	99	56.874	ENSONIG00000016129	polr3a	99	56.874	Oreochromis_niloticus
FBgn0030687	CG17209	97	57.406	ENSOANG00000007013	POLR3A	99	57.406	Ornithorhynchus_anatinus
FBgn0030687	CG17209	99	57.598	ENSOCUG00000012450	POLR3A	99	57.598	Oryctolagus_cuniculus
FBgn0030687	CG17209	99	56.512	ENSORLG00000008958	polr3a	99	56.512	Oryzias_latipes
FBgn0030687	CG17209	99	55.137	ENSORLG00020007525	polr3a	98	56.761	Oryzias_latipes_hni
FBgn0030687	CG17209	99	56.512	ENSORLG00015006633	polr3a	99	56.512	Oryzias_latipes_hsok
FBgn0030687	CG17209	99	56.408	ENSOMEG00000012865	polr3a	99	56.408	Oryzias_melastigma
FBgn0030687	CG17209	99	57.525	ENSOGAG00000010995	POLR3A	99	57.525	Otolemur_garnettii
FBgn0030687	CG17209	99	57.587	ENSOARG00000009656	POLR3A	99	57.587	Ovis_aries
FBgn0030687	CG17209	99	57.308	ENSPPRG00000002128	POLR3A	99	57.308	Panthera_pardus
FBgn0030687	CG17209	99	57.308	ENSPTIG00000020916	POLR3A	99	57.308	Panthera_tigris_altaica
FBgn0030687	CG17209	99	57.308	ENSPTRG00000002664	POLR3A	99	57.308	Pan_troglodytes
FBgn0030687	CG17209	99	57.381	ENSPANG00000022508	POLR3A	99	57.381	Papio_anubis
FBgn0030687	CG17209	99	56.874	ENSPKIG00000008140	polr3a	99	58.301	Paramormyrops_kingsleyae
FBgn0030687	CG17209	97	57.627	ENSPSIG00000002092	POLR3A	99	57.627	Pelodiscus_sinensis
FBgn0030687	CG17209	99	57.091	ENSPEMG00000006768	Polr3a	99	57.091	Peromyscus_maniculatus_bairdii
FBgn0030687	CG17209	99	57.381	ENSPCIG00000015842	POLR3A	99	57.381	Phascolarctos_cinereus
FBgn0030687	CG17209	53	55.450	ENSPFOG00000006458	polr3a	98	55.450	Poecilia_formosa
FBgn0030687	CG17209	99	57.091	ENSPLAG00000000997	polr3a	99	57.091	Poecilia_latipinna
FBgn0030687	CG17209	99	57.091	ENSPMEG00000006821	polr3a	99	57.091	Poecilia_mexicana
FBgn0030687	CG17209	99	57.091	ENSPREG00000002385	polr3a	99	57.091	Poecilia_reticulata
FBgn0030687	CG17209	92	57.354	ENSPPYG00000002305	POLR3A	99	57.354	Pongo_abelii
FBgn0030687	CG17209	79	60.746	ENSPCAG00000005690	POLR3A	82	60.746	Procavia_capensis
FBgn0030687	CG17209	99	57.308	ENSPCOG00000028311	POLR3A	99	57.308	Propithecus_coquereli
FBgn0030687	CG17209	99	56.585	ENSPVAG00000015553	POLR3A	99	56.585	Pteropus_vampyrus
FBgn0030687	CG17209	99	56.802	ENSPNYG00000020987	polr3a	99	56.802	Pundamilia_nyererei
FBgn0030687	CG17209	99	53.818	ENSPNAG00000006629	polr3a	99	53.818	Pygocentrus_nattereri
FBgn0030687	CG17209	99	57.453	ENSRNOG00000010008	Polr3a	99	57.453	Rattus_norvegicus
FBgn0030687	CG17209	99	54.224	ENSRBIG00000034967	POLR3A	94	60.526	Rhinopithecus_bieti
FBgn0030687	CG17209	99	57.236	ENSRROG00000025527	POLR3A	99	57.236	Rhinopithecus_roxellana
FBgn0030687	CG17209	97	45.790	YOR116C	RPO31	97	45.859	Saccharomyces_cerevisiae
FBgn0030687	CG17209	99	57.308	ENSSBOG00000022199	POLR3A	99	57.308	Saimiri_boliviensis_boliviensis
FBgn0030687	CG17209	99	57.308	ENSSHAG00000007588	POLR3A	93	57.308	Sarcophilus_harrisii
FBgn0030687	CG17209	99	57.525	ENSSFOG00015014357	polr3a	99	57.525	Scleropages_formosus
FBgn0030687	CG17209	99	56.772	ENSSMAG00000001780	polr3a	99	56.772	Scophthalmus_maximus
FBgn0030687	CG17209	99	56.628	ENSSDUG00000019840	polr3a	99	56.628	Seriola_dumerili
FBgn0030687	CG17209	99	56.556	ENSSLDG00000023908	polr3a	99	56.556	Seriola_lalandi_dorsalis
FBgn0030687	CG17209	68	69.592	ENSSARG00000009916	POLR3A	88	69.592	Sorex_araneus
FBgn0030687	CG17209	99	57.340	ENSSPUG00000013209	POLR3A	99	57.340	Sphenodon_punctatus
FBgn0030687	CG17209	99	56.802	ENSSPAG00000017712	polr3a	99	56.802	Stegastes_partitus
FBgn0030687	CG17209	99	57.308	ENSSSCG00000010327	POLR3A	99	59.140	Sus_scrofa
FBgn0030687	CG17209	99	57.453	ENSTGUG00000006423	-	99	57.453	Taeniopygia_guttata
FBgn0030687	CG17209	99	56.440	ENSTRUG00000013488	polr3a	99	56.440	Takifugu_rubripes
FBgn0030687	CG17209	99	56.358	ENSTNIG00000013151	polr3a	99	56.358	Tetraodon_nigroviridis
FBgn0030687	CG17209	70	80.851	ENSTBEG00000015288	POLR3A	74	80.851	Tupaia_belangeri
FBgn0030687	CG17209	99	53.835	ENSTTRG00000007817	POLR3A	99	53.835	Tursiops_truncatus
FBgn0030687	CG17209	99	56.196	ENSUAMG00000011283	POLR3A	99	56.196	Ursus_americanus
FBgn0030687	CG17209	99	57.381	ENSUMAG00000013913	POLR3A	99	57.381	Ursus_maritimus
FBgn0030687	CG17209	98	53.767	ENSVPAG00000003285	POLR3A	99	53.767	Vicugna_pacos
FBgn0030687	CG17209	99	57.308	ENSVVUG00000025523	POLR3A	99	57.308	Vulpes_vulpes
FBgn0030687	CG17209	85	57.131	ENSXETG00000018101	polr3a	99	57.131	Xenopus_tropicalis
FBgn0030687	CG17209	99	57.019	ENSXMAG00000015213	polr3a	99	57.019	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001056	RNA polymerase III activity	21873635.	IBA	Function
GO:0003677	DNA binding	-	IEA	Function
GO:0003899	DNA-directed 5'-3' RNA polymerase activity	21873635.	IBA	Function
GO:0005666	RNA polymerase III complex	21873635.	IBA	Component
GO:0045727	positive regulation of translation	29186112.	IMP	Process
GO:0045945	positive regulation of transcription by RNA polymerase III	29186112.	IMP	Process