EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0030720 (Gene tree)
Gene ID: 32568
Gene Symbol: CG8939
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Plus strand
Length: 2683 bases
Position: chrX:15997016-15999698
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0073943	FtsJ	PF01728.19	1e-53	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0074138	-	2622	-	FBpp0073943	817 (aa)	-	Q9VXK5

Gene Model

Click here to download FBgn0030720's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0030720's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0030720	CG8939	98	38.787	ENSG00000108592	FTSJ3	100	81.818	Homo_sapiens
FBgn0030720	CG8939	59	55.056	ENSAPOG00000005543	ftsj3	89	55.056	Acanthochromis_polyacanthus
FBgn0030720	CG8939	81	48.045	ENSAPLG00000010362	-	99	33.948	Anas_platyrhynchos
FBgn0030720	CG8939	98	38.825	ENSANAG00000033774	FTSJ3	99	39.344	Aotus_nancymaae
FBgn0030720	CG8939	62	59.692	ENSACLG00000019137	ftsj3	70	59.692	Astatotilapia_calliptera
FBgn0030720	CG8939	98	39.115	ENSBTAG00000021060	FTSJ3	99	39.883	Bos_taurus
FBgn0030720	CG8939	99	41.183	WBGene00019168	H06I04.3	100	42.091	Caenorhabditis_elegans
FBgn0030720	CG8939	99	39.140	ENSCAFG00000012770	FTSJ3	99	40.445	Canis_familiaris
FBgn0030720	CG8939	99	39.384	ENSCAFG00020026630	FTSJ3	99	40.211	Canis_lupus_dingo
FBgn0030720	CG8939	98	39.976	ENSCHIG00000025676	FTSJ3	99	40.688	Capra_hircus
FBgn0030720	CG8939	93	36.804	ENSTSYG00000001393	FTSJ3	98	36.452	Carlito_syrichta
FBgn0030720	CG8939	63	46.597	ENSCAPG00000016654	FTSJ3	75	54.299	Cavia_aperea
FBgn0030720	CG8939	98	38.621	ENSCATG00000018510	FTSJ3	99	39.486	Cercocebus_atys
FBgn0030720	CG8939	99	37.998	ENSCSAG00000003921	FTSJ3	99	39.369	Chlorocebus_sabaeus
FBgn0030720	CG8939	99	40.237	ENSCPBG00000010032	FTSJ3	99	38.863	Chrysemys_picta_bellii
FBgn0030720	CG8939	74	48.000	ENSCING00000025069	-	98	39.951	Ciona_intestinalis
FBgn0030720	CG8939	58	54.516	ENSCSAVG00000003607	-	97	37.961	Ciona_savignyi
FBgn0030720	CG8939	98	38.934	ENSCANG00000042921	FTSJ3	99	39.603	Colobus_angolensis_palliatus
FBgn0030720	CG8939	98	39.953	ENSCGRG00001018068	FTSJ3	99	41.011	Cricetulus_griseus_chok1gshd
FBgn0030720	CG8939	98	39.953	ENSCGRG00000010648	FTSJ3	99	41.011	Cricetulus_griseus_crigri
FBgn0030720	CG8939	98	41.558	ENSDARG00000104938	ftsj3	98	42.142	Danio_rerio
FBgn0030720	CG8939	99	38.427	ENSDNOG00000002392	FTSJ3	99	39.095	Dasypus_novemcinctus
FBgn0030720	CG8939	98	39.557	ENSDORG00000004200	Ftsj3	99	40.802	Dipodomys_ordii
FBgn0030720	CG8939	64	55.385	ENSETEG00000019228	FTSJ3	98	38.876	Echinops_telfairi
FBgn0030720	CG8939	99	40.636	ENSEBUG00000007828	ftsj3	97	40.459	Eptatretus_burgeri
FBgn0030720	CG8939	99	40.071	ENSEASG00005013565	FTSJ3	99	40.662	Equus_asinus_asinus
FBgn0030720	CG8939	98	39.232	ENSECAG00000011995	FTSJ3	99	39.790	Equus_caballus
FBgn0030720	CG8939	98	39.002	ENSFALG00000013635	FTSJ3	99	40.668	Ficedula_albicollis
FBgn0030720	CG8939	67	41.289	ENSFDAG00000010274	FTSJ3	99	40.566	Fukomys_damarensis
FBgn0030720	CG8939	99	40.707	ENSGAGG00000006236	FTSJ3	99	41.833	Gopherus_agassizii
FBgn0030720	CG8939	98	39.265	ENSGGOG00000006794	FTSJ3	99	39.953	Gorilla_gorilla
FBgn0030720	CG8939	98	38.902	ENSHGLG00000012282	FTSJ3	99	40.585	Heterocephalus_glaber_female
FBgn0030720	CG8939	98	38.902	ENSHGLG00100003578	FTSJ3	99	40.585	Heterocephalus_glaber_male
FBgn0030720	CG8939	98	40.000	ENSSTOG00000021265	FTSJ3	99	39.623	Ictidomys_tridecemlineatus
FBgn0030720	CG8939	98	41.190	ENSJJAG00000012822	Ftsj3	99	40.662	Jaculus_jaculus
FBgn0030720	CG8939	67	41.711	ENSLAFG00000003252	FTSJ3	65	41.522	Loxodonta_africana
FBgn0030720	CG8939	98	38.046	ENSMFAG00000003764	FTSJ3	99	39.369	Macaca_fascicularis
FBgn0030720	CG8939	98	39.420	ENSMMUG00000016768	FTSJ3	99	39.568	Macaca_mulatta
FBgn0030720	CG8939	98	39.298	ENSMNEG00000029254	FTSJ3	99	39.369	Macaca_nemestrina
FBgn0030720	CG8939	98	38.506	ENSMLEG00000029091	FTSJ3	99	39.510	Mandrillus_leucophaeus
FBgn0030720	CG8939	89	43.328	ENSMGAG00000000953	FTSJ3	84	43.548	Meleagris_gallopavo
FBgn0030720	CG8939	98	40.974	ENSMAUG00000015688	Ftsj3	99	40.405	Mesocricetus_auratus
FBgn0030720	CG8939	99	40.094	ENSMOCG00000017809	Ftsj3	99	40.476	Microtus_ochrogaster
FBgn0030720	CG8939	99	38.794	ENSMODG00000009901	FTSJ3	99	40.070	Monodelphis_domestica
FBgn0030720	CG8939	98	39.792	MGP_CAROLIEiJ_G0017315	Ftsj3	99	40.233	Mus_caroli
FBgn0030720	CG8939	98	39.815	ENSMUSG00000020706	Ftsj3	99	40.581	Mus_musculus
FBgn0030720	CG8939	98	40.118	MGP_PahariEiJ_G0018445	Ftsj3	99	40.255	Mus_pahari
FBgn0030720	CG8939	98	39.699	MGP_SPRETEiJ_G0018159	Ftsj3	99	40.302	Mus_spretus
FBgn0030720	CG8939	99	39.977	ENSMPUG00000014911	FTSJ3	99	40.376	Mustela_putorius_furo
FBgn0030720	CG8939	67	41.638	ENSMLUG00000011667	FTSJ3	64	43.416	Myotis_lucifugus
FBgn0030720	CG8939	67	41.434	ENSNGAG00000005899	Ftsj3	65	43.649	Nannospalax_galili
FBgn0030720	CG8939	62	59.692	ENSNBRG00000017453	ftsj3	70	59.692	Neolamprologus_brichardi
FBgn0030720	CG8939	98	38.594	ENSNLEG00000004188	FTSJ3	99	39.696	Nomascus_leucogenys
FBgn0030720	CG8939	74	46.154	ENSMEUG00000013252	FTSJ3	61	50.769	Notamacropus_eugenii
FBgn0030720	CG8939	98	37.847	ENSOPRG00000014985	FTSJ3	99	40.093	Ochotona_princeps
FBgn0030720	CG8939	99	39.882	ENSODEG00000008167	FTSJ3	99	39.836	Octodon_degus
FBgn0030720	CG8939	99	39.675	ENSOCUG00000004319	FTSJ3	64	42.857	Oryctolagus_cuniculus
FBgn0030720	CG8939	63	58.462	ENSORLG00020021255	ftsj3	75	51.816	Oryzias_latipes_hni
FBgn0030720	CG8939	64	59.692	ENSOMEG00000014432	ftsj3	97	41.142	Oryzias_melastigma
FBgn0030720	CG8939	98	39.050	ENSOARG00000013637	FTSJ3	99	39.977	Ovis_aries
FBgn0030720	CG8939	98	38.673	ENSPPAG00000027297	FTSJ3	64	42.705	Pan_paniscus
FBgn0030720	CG8939	99	39.286	ENSPPRG00000003042	FTSJ3	99	39.156	Panthera_pardus
FBgn0030720	CG8939	99	39.171	ENSPTIG00000012576	FTSJ3	99	38.928	Panthera_tigris_altaica
FBgn0030720	CG8939	98	38.286	ENSPTRG00000009524	FTSJ3	64	42.705	Pan_troglodytes
FBgn0030720	CG8939	98	38.736	ENSPANG00000020978	FTSJ3	99	39.486	Papio_anubis
FBgn0030720	CG8939	61	60.000	ENSPKIG00000012838	ftsj3	97	41.266	Paramormyrops_kingsleyae
FBgn0030720	CG8939	98	40.925	ENSPEMG00000000248	Ftsj3	99	40.828	Peromyscus_maniculatus_bairdii
FBgn0030720	CG8939	98	40.024	ENSPPYG00000008532	FTSJ3	99	39.620	Pongo_abelii
FBgn0030720	CG8939	99	38.550	ENSPCAG00000002560	FTSJ3	99	39.810	Procavia_capensis
FBgn0030720	CG8939	98	38.578	ENSPCOG00000023921	FTSJ3	99	39.369	Propithecus_coquereli
FBgn0030720	CG8939	67	42.397	ENSPVAG00000000162	FTSJ3	99	39.252	Pteropus_vampyrus
FBgn0030720	CG8939	62	59.692	ENSPNYG00000005108	ftsj3	69	59.692	Pundamilia_nyererei
FBgn0030720	CG8939	67	42.218	ENSRNOG00000009857	Ftsj3	99	40.585	Rattus_norvegicus
FBgn0030720	CG8939	98	38.276	ENSRBIG00000039259	FTSJ3	99	39.486	Rhinopithecus_bieti
FBgn0030720	CG8939	98	38.417	ENSRROG00000045002	FTSJ3	99	39.369	Rhinopithecus_roxellana
FBgn0030720	CG8939	98	38.586	ENSSBOG00000031794	FTSJ3	92	39.929	Saimiri_boliviensis_boliviensis
FBgn0030720	CG8939	67	40.708	ENSSHAG00000013062	FTSJ3	64	42.553	Sarcophilus_harrisii
FBgn0030720	CG8939	98	38.391	ENSSSCG00000017288	FTSJ3	99	39.720	Sus_scrofa
FBgn0030720	CG8939	98	36.782	ENSTBEG00000010295	FTSJ3	99	37.116	Tupaia_belangeri
FBgn0030720	CG8939	98	39.319	ENSTTRG00000006973	FTSJ3	99	38.408	Tursiops_truncatus
FBgn0030720	CG8939	80	69.173	ENSUAMG00000007332	FTSJ3	95	69.173	Ursus_americanus
FBgn0030720	CG8939	99	39.501	ENSVVUG00000006106	FTSJ3	99	40.234	Vulpes_vulpes
FBgn0030720	CG8939	96	37.602	ENSXETG00000006939	ftsj3	71	47.750	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000463	maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	21873635.	IBA	Process
GO:0000466	maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	21873635.	IBA	Process
GO:0005730	nucleolus	21873635.	IBA	Component
GO:0008650	rRNA (uridine-2'-O-)-methyltransferase activity	21873635.	IBA	Function
GO:0016435	rRNA (guanine) methyltransferase activity	21873635.	IBA	Function
GO:0030687	preribosome, large subunit precursor	21873635.	IBA	Component
GO:0031167	rRNA methylation	21873635.	IBA	Process