EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0031319 (Gene tree)
Gene ID: 33305
Gene Symbol: CG4896
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Plus strand
Length: 4765 bases
Position: chr2L:1177690-1182454
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0311118	RRM_1	PF00076.22	8.3e-10	1	1
FBpp0077633	RRM_1	PF00076.22	8.3e-10	1	1
FBpp0311118	G-patch	PF01585.23	2.6e-17	1	1
FBpp0077633	G-patch	PF01585.23	2.6e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0344790	-	3193	-	FBpp0311118	947 (aa)	-	Q8IPW6
FBtr0335394	-	3118	-	FBpp0307377	265 (aa)	-	M9PDX7
FBtr0077968	-	3192	-	FBpp0077633	949 (aa)	-	A0A023GRW3
FBtr0308698	-	3781	-	FBpp0300904	262 (aa)	-	M9NDC4
FBtr0335395	-	3956	-	FBpp0307378	262 (aa)	-	M9NDC4

Gene Model

Click here to download FBgn0031319's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0031319's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
FBgn0031319	CG4896	93	63.237	FBgn0031318	CG4887	92	62.915

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0031319	CG4896	70	31.884	WBGene00020346	rbm-5	83	31.884	Caenorhabditis_elegans

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000381	regulation of alternative mRNA splicing, via spliceosome	-	ISS	Process
GO:0003723	RNA binding	-	ISS	Function
GO:0003729	mRNA binding	10908586.	ISS	Function
GO:0005654	nucleoplasm	-	ISS	Component