EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0031390 (Gene tree)
Gene ID: 326153
Gene Symbol: tho2
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: confidence
Strand: Minus strand
Length: 7838 bases
Position: chr2L:2137350-2145187
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0077525	Tho2	PF11262.8	2.8e-101	1	1
FBpp0306851	Tho2	PF11262.8	2.8e-101	1	1
FBpp0290874	Tho2	PF11262.8	2.8e-101	1	1
FBpp0077525	Thoc2	PF11732.8	1.1e-28	1	1
FBpp0290874	Thoc2	PF11732.8	1.1e-28	1	1
FBpp0306851	Thoc2	PF11732.8	1.1e-28	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27197210	The mRNA-bound proteome of the early fly embryo	IC & embryos	2016 Apr 28	Wessels HH	DOI: 10.1101/gr.200386.115

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0301660	-	5404	-	FBpp0290874	1642 (aa)	-	E2QCS8
FBtr0334814	-	5401	-	FBpp0306851	1641 (aa)	-	E2QCS8
FBtr0077853	-	5401	-	FBpp0077525	1641 (aa)	-	Q9VQ76

Gene Model

Click here to download FBgn0031390's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0031390's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0031390	tho2	73	48.000	ENSG00000125676	THOC2	97	41.882	Homo_sapiens
FBgn0031390	tho2	81	44.702	ENSAPOG00000003459	thoc2	99	41.433	Acanthochromis_polyacanthus
FBgn0031390	tho2	73	47.750	ENSAMEG00000014841	THOC2	97	40.773	Ailuropoda_melanoleuca
FBgn0031390	tho2	77	44.765	ENSACIG00000015022	thoc2	94	45.134	Amphilophus_citrinellus
FBgn0031390	tho2	82	43.888	ENSAOCG00000013305	thoc2	95	44.756	Amphiprion_ocellaris
FBgn0031390	tho2	81	43.582	ENSAPEG00000004792	thoc2	98	41.694	Amphiprion_percula
FBgn0031390	tho2	81	44.348	ENSATEG00000013110	thoc2	98	41.176	Anabas_testudineus
FBgn0031390	tho2	70	49.182	ENSAPLG00000010614	THOC2	97	42.406	Anas_platyrhynchos
FBgn0031390	tho2	75	47.611	ENSACAG00000011585	THOC2	94	41.495	Anolis_carolinensis
FBgn0031390	tho2	73	48.050	ENSANAG00000022505	-	96	43.494	Aotus_nancymaae
FBgn0031390	tho2	70	47.901	ENSANAG00000034037	-	98	40.582	Aotus_nancymaae
FBgn0031390	tho2	89	41.942	ENSACLG00000012036	thoc2	93	44.161	Astatotilapia_calliptera
FBgn0031390	tho2	93	41.146	ENSAMXG00000014184	thoc2	98	42.283	Astyanax_mexicanus
FBgn0031390	tho2	73	48.043	ENSBTAG00000008388	THOC2	97	40.467	Bos_taurus
FBgn0031390	tho2	75	46.474	ENSBTAG00000047341	-	97	40.074	Bos_taurus
FBgn0031390	tho2	69	33.616	WBGene00015813	thoc-2	79	33.531	Caenorhabditis_elegans
FBgn0031390	tho2	73	47.960	ENSCJAG00000016157	THOC2	94	43.874	Callithrix_jacchus
FBgn0031390	tho2	73	48.000	ENSCAFG00000018574	THOC2	99	41.037	Canis_familiaris
FBgn0031390	tho2	73	48.000	ENSCAFG00020002284	THOC2	98	40.223	Canis_lupus_dingo
FBgn0031390	tho2	73	48.043	ENSCHIG00000017733	-	96	40.903	Capra_hircus
FBgn0031390	tho2	74	47.227	ENSCHIG00000025851	-	99	40.198	Capra_hircus
FBgn0031390	tho2	73	47.833	ENSTSYG00000012292	THOC2	97	40.397	Carlito_syrichta
FBgn0031390	tho2	73	47.078	ENSCPOG00000038670	THOC2	98	40.269	Cavia_porcellus
FBgn0031390	tho2	73	48.250	ENSCCAG00000021906	THOC2	97	41.736	Cebus_capucinus
FBgn0031390	tho2	73	48.000	ENSCATG00000003183	THOC2	97	41.263	Cercocebus_atys
FBgn0031390	tho2	73	48.043	ENSCLAG00000002641	THOC2	97	42.068	Chinchilla_lanigera
FBgn0031390	tho2	73	48.000	ENSCSAG00000018332	THOC2	97	40.825	Chlorocebus_sabaeus
FBgn0031390	tho2	93	42.095	ENSCPBG00000012863	THOC2	96	47.394	Chrysemys_picta_bellii
FBgn0031390	tho2	73	45.291	ENSCING00000007364	-	99	44.938	Ciona_intestinalis
FBgn0031390	tho2	61	47.976	ENSCSAVG00000007923	-	100	58.511	Ciona_savignyi
FBgn0031390	tho2	73	48.000	ENSCANG00000035077	THOC2	97	41.518	Colobus_angolensis_palliatus
FBgn0031390	tho2	76	46.913	ENSCGRG00001009811	BC005561	95	41.092	Cricetulus_griseus_chok1gshd
FBgn0031390	tho2	73	47.686	ENSCGRG00001015509	Thoc2	97	41.012	Cricetulus_griseus_chok1gshd
FBgn0031390	tho2	75	47.087	ENSCGRG00000000980	BC005561	96	40.968	Cricetulus_griseus_crigri
FBgn0031390	tho2	70	47.301	ENSCGRG00000001226	Thoc2	96	40.769	Cricetulus_griseus_crigri
FBgn0031390	tho2	74	45.744	ENSCSEG00000019946	thoc2	96	44.203	Cynoglossus_semilaevis
FBgn0031390	tho2	81	42.246	ENSCVAG00000021509	thoc2	99	40.218	Cyprinodon_variegatus
FBgn0031390	tho2	73	47.545	ENSDARG00000037503	thoc2	99	41.976	Danio_rerio
FBgn0031390	tho2	73	47.291	ENSDNOG00000012487	THOC2	98	39.830	Dasypus_novemcinctus
FBgn0031390	tho2	68	44.188	ENSETEG00000016183	THOC2	93	38.624	Echinops_telfairi
FBgn0031390	tho2	70	48.879	ENSEASG00005017399	THOC2	97	41.279	Equus_asinus_asinus
FBgn0031390	tho2	75	47.445	ENSECAG00000010431	THOC2	99	41.853	Equus_caballus
FBgn0031390	tho2	52	55.063	ENSEEUG00000015598	THOC2	57	55.063	Erinaceus_europaeus
FBgn0031390	tho2	89	42.527	ENSELUG00000007778	thoc2	98	42.595	Esox_lucius
FBgn0031390	tho2	73	48.000	ENSFCAG00000008301	THOC2	99	40.677	Felis_catus
FBgn0031390	tho2	75	46.482	ENSFALG00000001519	THOC2	99	40.207	Ficedula_albicollis
FBgn0031390	tho2	70	48.747	ENSFDAG00000017237	THOC2	98	42.102	Fukomys_damarensis
FBgn0031390	tho2	79	43.824	ENSFHEG00000001695	thoc2	99	41.552	Fundulus_heteroclitus
FBgn0031390	tho2	78	45.433	ENSGMOG00000000069	thoc2	99	41.457	Gadus_morhua
FBgn0031390	tho2	91	42.298	ENSGALG00000008507	THOC2	99	42.149	Gallus_gallus
FBgn0031390	tho2	75	45.556	ENSGAFG00000005902	thoc2	100	41.006	Gambusia_affinis
FBgn0031390	tho2	83	42.978	ENSGACG00000020367	thoc2	99	41.088	Gasterosteus_aculeatus
FBgn0031390	tho2	93	41.683	ENSGAGG00000024263	THOC2	99	41.805	Gopherus_agassizii
FBgn0031390	tho2	73	48.000	ENSGGOG00000000486	THOC2	97	41.518	Gorilla_gorilla
FBgn0031390	tho2	89	42.972	ENSHBUG00000003516	thoc2	99	42.191	Haplochromis_burtoni
FBgn0031390	tho2	73	47.603	ENSHGLG00000004222	THOC2	97	40.750	Heterocephalus_glaber_female
FBgn0031390	tho2	74	47.463	ENSHGLG00100011595	THOC2	76	47.545	Heterocephalus_glaber_male
FBgn0031390	tho2	79	43.202	ENSHCOG00000006276	thoc2	98	40.342	Hippocampus_comes
FBgn0031390	tho2	93	41.881	ENSIPUG00000015876	thoc2	99	43.139	Ictalurus_punctatus
FBgn0031390	tho2	73	48.167	ENSSTOG00000009134	THOC2	97	40.884	Ictidomys_tridecemlineatus
FBgn0031390	tho2	73	47.647	ENSJJAG00000017282	Thoc2	94	41.677	Jaculus_jaculus
FBgn0031390	tho2	77	46.646	ENSJJAG00000008784	BC005561	97	40.357	Jaculus_jaculus
FBgn0031390	tho2	81	44.249	ENSKMAG00000012263	thoc2	97	44.241	Kryptolebias_marmoratus
FBgn0031390	tho2	84	43.619	ENSLBEG00000003049	thoc2	96	44.629	Labrus_bergylta
FBgn0031390	tho2	90	43.324	ENSLACG00000016494	THOC2	99	43.378	Latimeria_chalumnae
FBgn0031390	tho2	93	41.135	ENSLOCG00000014546	thoc2	98	41.018	Lepisosteus_oculatus
FBgn0031390	tho2	73	48.083	ENSLAFG00000003146	THOC2	97	41.104	Loxodonta_africana
FBgn0031390	tho2	73	48.000	ENSMFAG00000042215	THOC2	97	41.263	Macaca_fascicularis
FBgn0031390	tho2	73	48.000	ENSMMUG00000003745	THOC2	99	42.144	Macaca_mulatta
FBgn0031390	tho2	73	48.000	ENSMNEG00000033627	THOC2	97	41.263	Macaca_nemestrina
FBgn0031390	tho2	73	48.000	ENSMLEG00000034817	THOC2	99	41.225	Mandrillus_leucophaeus
FBgn0031390	tho2	89	42.391	ENSMAMG00000012993	thoc2	99	40.870	Mastacembelus_armatus
FBgn0031390	tho2	89	43.040	ENSMZEG00005015842	thoc2	97	41.698	Maylandia_zebra
FBgn0031390	tho2	94	41.524	ENSMGAG00000007345	THOC2	98	41.474	Meleagris_gallopavo
FBgn0031390	tho2	73	47.686	ENSMAUG00000002356	Thoc2	97	40.807	Mesocricetus_auratus
FBgn0031390	tho2	73	47.967	ENSMICG00000011840	THOC2	95	40.849	Microcebus_murinus
FBgn0031390	tho2	73	47.686	ENSMOCG00000009946	Thoc2	97	40.657	Microtus_ochrogaster
FBgn0031390	tho2	74	47.424	ENSMOCG00000019406	BC005561	97	40.785	Microtus_ochrogaster
FBgn0031390	tho2	82	43.627	ENSMMOG00000016313	thoc2	95	43.615	Mola_mola
FBgn0031390	tho2	96	40.663	ENSMODG00000014984	THOC2	96	40.815	Monodelphis_domestica
FBgn0031390	tho2	91	39.833	ENSMALG00000019718	thoc2	99	40.495	Monopterus_albus
FBgn0031390	tho2	73	47.934	MGP_CAROLIEiJ_G0033023	Thoc2	96	41.388	Mus_caroli
FBgn0031390	tho2	74	46.850	MGP_CAROLIEiJ_G0027482	BC005561	95	40.855	Mus_caroli
FBgn0031390	tho2	73	47.934	ENSMUSG00000037475	Thoc2	96	41.450	Mus_musculus
FBgn0031390	tho2	75	46.209	ENSMUSG00000079065	BC005561	95	40.895	Mus_musculus
FBgn0031390	tho2	73	47.934	MGP_PahariEiJ_G0031569	Thoc2	96	41.418	Mus_pahari
FBgn0031390	tho2	74	46.968	MGP_PahariEiJ_G0017260	BC005561	95	40.886	Mus_pahari
FBgn0031390	tho2	75	46.209	MGP_SPRETEiJ_G0028479	BC005561	95	40.895	Mus_spretus
FBgn0031390	tho2	73	47.934	MGP_SPRETEiJ_G0034181	Thoc2	96	41.450	Mus_spretus
FBgn0031390	tho2	73	47.887	ENSMPUG00000001357	THOC2	97	40.700	Mustela_putorius_furo
FBgn0031390	tho2	70	48.407	ENSMLUG00000013656	-	96	40.892	Myotis_lucifugus
FBgn0031390	tho2	71	43.976	ENSMLUG00000028256	-	98	38.563	Myotis_lucifugus
FBgn0031390	tho2	66	56.373	ENSMLUG00000027559	-	95	42.414	Myotis_lucifugus
FBgn0031390	tho2	74	46.148	ENSMLUG00000026072	-	99	41.108	Myotis_lucifugus
FBgn0031390	tho2	96	40.845	ENSNGAG00000010936	BC005561	97	40.529	Nannospalax_galili
FBgn0031390	tho2	73	48.083	ENSNGAG00000016184	Thoc2	96	41.213	Nannospalax_galili
FBgn0031390	tho2	77	44.578	ENSNBRG00000018089	thoc2	99	43.552	Neolamprologus_brichardi
FBgn0031390	tho2	73	46.020	ENSNLEG00000015055	THOC2	99	39.543	Nomascus_leucogenys
FBgn0031390	tho2	63	48.725	ENSMEUG00000003533	THOC2	61	52.206	Notamacropus_eugenii
FBgn0031390	tho2	73	47.917	ENSODEG00000002478	THOC2	98	40.444	Octodon_degus
FBgn0031390	tho2	89	43.078	ENSONIG00000004348	thoc2	97	41.734	Oreochromis_niloticus
FBgn0031390	tho2	94	41.720	ENSOANG00000004054	THOC2	97	42.004	Ornithorhynchus_anatinus
FBgn0031390	tho2	73	47.751	ENSOCUG00000005996	THOC2	99	40.906	Oryctolagus_cuniculus
FBgn0031390	tho2	81	44.461	ENSORLG00000008692	thoc2	99	41.295	Oryzias_latipes
FBgn0031390	tho2	79	44.338	ENSORLG00020002321	thoc2	99	41.370	Oryzias_latipes_hni
FBgn0031390	tho2	79	44.478	ENSORLG00015000665	thoc2	99	42.112	Oryzias_latipes_hsok
FBgn0031390	tho2	74	46.457	ENSOMEG00000004006	thoc2	98	41.110	Oryzias_melastigma
FBgn0031390	tho2	73	48.043	ENSOGAG00000000302	THOC2	98	40.501	Otolemur_garnettii
FBgn0031390	tho2	52	67.213	ENSOARG00000003614	-	67	67.213	Ovis_aries
FBgn0031390	tho2	70	48.877	ENSOARG00000013665	-	96	40.872	Ovis_aries
FBgn0031390	tho2	73	47.733	ENSPPAG00000040720	THOC2	99	43.528	Pan_paniscus
FBgn0031390	tho2	73	48.083	ENSPPRG00000023137	THOC2	97	40.554	Panthera_pardus
FBgn0031390	tho2	73	48.083	ENSPTIG00000006983	THOC2	76	47.368	Panthera_tigris_altaica
FBgn0031390	tho2	73	48.000	ENSPTRG00000022246	THOC2	98	41.045	Pan_troglodytes
FBgn0031390	tho2	70	47.364	ENSPANG00000004038	THOC2	99	40.355	Papio_anubis
FBgn0031390	tho2	74	46.286	ENSPKIG00000021719	thoc2	98	41.375	Paramormyrops_kingsleyae
FBgn0031390	tho2	98	41.001	ENSPSIG00000015352	THOC2	95	41.341	Pelodiscus_sinensis
FBgn0031390	tho2	81	43.001	ENSPMGG00000002688	thoc2	90	43.848	Periophthalmus_magnuspinnatus
FBgn0031390	tho2	73	47.654	ENSPEMG00000007626	Thoc2	96	41.007	Peromyscus_maniculatus_bairdii
FBgn0031390	tho2	75	47.097	ENSPEMG00000011125	BC005561	96	40.926	Peromyscus_maniculatus_bairdii
FBgn0031390	tho2	93	42.186	ENSPMAG00000007219	-	100	48.384	Petromyzon_marinus
FBgn0031390	tho2	60	46.953	ENSPCIG00000007574	THOC2	99	48.152	Phascolarctos_cinereus
FBgn0031390	tho2	93	41.060	ENSPFOG00000019556	thoc2	99	40.441	Poecilia_formosa
FBgn0031390	tho2	76	45.274	ENSPLAG00000005761	thoc2	99	40.746	Poecilia_latipinna
FBgn0031390	tho2	76	45.353	ENSPMEG00000002951	thoc2	97	40.684	Poecilia_mexicana
FBgn0031390	tho2	93	41.263	ENSPREG00000021746	thoc2	97	40.920	Poecilia_reticulata
FBgn0031390	tho2	73	48.000	ENSPPYG00000020695	THOC2	97	40.825	Pongo_abelii
FBgn0031390	tho2	74	40.311	ENSPCAG00000005402	THOC2	82	39.533	Procavia_capensis
FBgn0031390	tho2	68	49.032	ENSPCOG00000001806	THOC2	93	41.974	Propithecus_coquereli
FBgn0031390	tho2	73	47.583	ENSPVAG00000006132	THOC2	97	41.219	Pteropus_vampyrus
FBgn0031390	tho2	89	42.088	ENSPNYG00000019622	thoc2	93	44.088	Pundamilia_nyererei
FBgn0031390	tho2	77	43.918	ENSPNAG00000020593	thoc2	99	40.225	Pygocentrus_nattereri
FBgn0031390	tho2	74	46.968	ENSRNOG00000042340	LOC679894	97	40.798	Rattus_norvegicus
FBgn0031390	tho2	73	47.603	ENSRNOG00000007315	Thoc2	96	41.067	Rattus_norvegicus
FBgn0031390	tho2	61	49.900	ENSRBIG00000044129	THOC2	99	42.655	Rhinopithecus_bieti
FBgn0031390	tho2	73	48.000	ENSRROG00000041515	THOC2	98	41.474	Rhinopithecus_roxellana
FBgn0031390	tho2	73	48.250	ENSSBOG00000007245	THOC2	98	41.624	Saimiri_boliviensis_boliviensis
FBgn0031390	tho2	94	41.587	ENSSHAG00000015987	THOC2	95	42.367	Sarcophilus_harrisii
FBgn0031390	tho2	75	46.302	ENSSFOG00015010127	thoc2	97	43.021	Scleropages_formosus
FBgn0031390	tho2	84	44.257	ENSSFOG00015004767	THOC2	99	41.784	Scleropages_formosus
FBgn0031390	tho2	90	42.243	ENSSMAG00000016574	thoc2	99	41.563	Scophthalmus_maximus
FBgn0031390	tho2	82	44.373	ENSSDUG00000012815	thoc2	100	42.095	Seriola_dumerili
FBgn0031390	tho2	93	41.218	ENSSLDG00000015816	thoc2	99	41.688	Seriola_lalandi_dorsalis
FBgn0031390	tho2	65	51.273	ENSSARG00000005799	THOC2	71	50.168	Sorex_araneus
FBgn0031390	tho2	95	40.932	ENSSPUG00000012889	THOC2	96	41.097	Sphenodon_punctatus
FBgn0031390	tho2	76	44.931	ENSSPAG00000023593	thoc2	91	43.800	Stegastes_partitus
FBgn0031390	tho2	73	48.000	ENSSSCG00000012639	THOC2	99	40.654	Sus_scrofa
FBgn0031390	tho2	68	49.376	ENSTGUG00000003682	THOC2	99	42.028	Taeniopygia_guttata
FBgn0031390	tho2	79	45.310	ENSTRUG00000015122	thoc2	97	41.246	Takifugu_rubripes
FBgn0031390	tho2	79	45.004	ENSTNIG00000011794	thoc2	99	40.989	Tetraodon_nigroviridis
FBgn0031390	tho2	57	49.788	ENSTBEG00000004420	-	99	41.084	Tupaia_belangeri
FBgn0031390	tho2	63	56.443	ENSTTRG00000002762	THOC2	70	54.765	Tursiops_truncatus
FBgn0031390	tho2	73	48.000	ENSUAMG00000008780	THOC2	99	42.752	Ursus_americanus
FBgn0031390	tho2	81	42.420	ENSUMAG00000024014	THOC2	99	41.165	Ursus_maritimus
FBgn0031390	tho2	70	48.964	ENSVPAG00000006247	THOC2	97	41.418	Vicugna_pacos
FBgn0031390	tho2	73	48.000	ENSVVUG00000028282	THOC2	96	46.238	Vulpes_vulpes
FBgn0031390	tho2	73	47.678	ENSXETG00000016195	thoc2	99	56.774	Xenopus_tropicalis
FBgn0031390	tho2	75	45.236	ENSXCOG00000006301	thoc2	97	40.484	Xiphophorus_couchianus
FBgn0031390	tho2	75	45.236	ENSXMAG00000011604	thoc2	90	45.276	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000346	transcription export complex	-	ISS	Component
GO:0000347	THO complex	15133499.	IDA	Component
GO:0000445	THO complex part of transcription export complex	21873635.	IBA	Component
GO:0003729	mRNA binding	21873635.	IBA	Function
GO:0005634	nucleus	21828100.	IDA	Component
GO:0006397	mRNA processing	-	IEA	Process
GO:0006406	mRNA export from nucleus	21873635.	IBA	Process
GO:0031990	mRNA export from nucleus in response to heat stress	15133499.	IMP	Process
GO:0048477	oogenesis	23450845.	IMP	Process