EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0031456 (Gene tree)
Gene ID: 33465
Gene Symbol: Tnpo-SR
Alias: -
Full Name: Transportin-Serine/Arginine rich
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Plus strand
Length: 3966 bases
Position: chr2L:2759924-2763889
Accession: FBgn0031456
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0077399	Xpo1	PF08389.12	2.9e-27	1	1
FBpp0307125	Xpo1	PF08389.12	2.9e-27	1	1
FBpp0077399	IBN_N	PF03810.19	1.3e-10	1	1
FBpp0307125	IBN_N	PF03810.19	1.3e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0335126	-	3586	-	FBpp0307125	932 (aa)	-	Q9VQG0
FBtr0077715	-	3307	-	FBpp0077399	932 (aa)	-	Q9VQG0

Gene Model

Click here to download FBgn0031456's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0031456's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0031456	Tnpo-SR	99	42.519	ENSG00000064419	TNPO3	100	42.578	Homo_sapiens
FBgn0031456	Tnpo-SR	99	43.488	ENSAPOG00000018347	tnpo3	99	43.488	Acanthochromis_polyacanthus
FBgn0031456	Tnpo-SR	99	40.710	ENSAMEG00000005135	TNPO3	98	40.710	Ailuropoda_melanoleuca
FBgn0031456	Tnpo-SR	96	42.969	ENSACIG00000005897	tnpo3	99	42.969	Amphilophus_citrinellus
FBgn0031456	Tnpo-SR	99	43.703	ENSAOCG00000008264	tnpo3	99	43.703	Amphiprion_ocellaris
FBgn0031456	Tnpo-SR	96	43.799	ENSAPEG00000024300	tnpo3	100	43.799	Amphiprion_percula
FBgn0031456	Tnpo-SR	99	43.488	ENSATEG00000003197	tnpo3	99	43.488	Anabas_testudineus
FBgn0031456	Tnpo-SR	84	36.701	ENSAPLG00000005946	TNPO3	99	36.701	Anas_platyrhynchos
FBgn0031456	Tnpo-SR	83	41.969	ENSACAG00000013470	TNPO3	95	41.969	Anolis_carolinensis
FBgn0031456	Tnpo-SR	99	42.519	ENSANAG00000037940	TNPO3	99	42.857	Aotus_nancymaae
FBgn0031456	Tnpo-SR	99	43.488	ENSACLG00000005561	tnpo3	99	43.488	Astatotilapia_calliptera
FBgn0031456	Tnpo-SR	99	43.488	ENSAMXG00000016236	tnpo3	99	43.488	Astyanax_mexicanus
FBgn0031456	Tnpo-SR	99	42.626	ENSBTAG00000004992	TNPO3	100	42.693	Bos_taurus
FBgn0031456	Tnpo-SR	99	42.734	ENSCJAG00000018085	TNPO3	99	43.132	Callithrix_jacchus
FBgn0031456	Tnpo-SR	99	42.519	ENSCAFG00000001543	TNPO3	99	42.519	Canis_familiaris
FBgn0031456	Tnpo-SR	99	42.519	ENSCAFG00020022462	TNPO3	99	42.444	Canis_lupus_dingo
FBgn0031456	Tnpo-SR	99	42.626	ENSCHIG00000011721	TNPO3	99	42.626	Capra_hircus
FBgn0031456	Tnpo-SR	99	42.519	ENSTSYG00000002989	TNPO3	99	42.582	Carlito_syrichta
FBgn0031456	Tnpo-SR	65	42.991	ENSCAPG00000005843	TNPO3	89	42.991	Cavia_aperea
FBgn0031456	Tnpo-SR	99	42.411	ENSCPOG00000039784	TNPO3	99	42.411	Cavia_porcellus
FBgn0031456	Tnpo-SR	99	42.626	ENSCCAG00000033826	TNPO3	100	42.693	Cebus_capucinus
FBgn0031456	Tnpo-SR	99	42.519	ENSCATG00000030018	TNPO3	100	42.578	Cercocebus_atys
FBgn0031456	Tnpo-SR	99	42.015	ENSCLAG00000016298	TNPO3	99	42.015	Chinchilla_lanigera
FBgn0031456	Tnpo-SR	99	42.519	ENSCSAG00000009966	TNPO3	99	42.519	Chlorocebus_sabaeus
FBgn0031456	Tnpo-SR	82	37.405	ENSCHOG00000011547	TNPO3	82	37.405	Choloepus_hoffmanni
FBgn0031456	Tnpo-SR	93	41.772	ENSCPBG00000017497	TNPO3	100	42.002	Chrysemys_picta_bellii
FBgn0031456	Tnpo-SR	99	38.817	ENSCING00000005042	-	99	38.817	Ciona_intestinalis
FBgn0031456	Tnpo-SR	99	37.972	ENSCSAVG00000008623	-	99	37.972	Ciona_savignyi
FBgn0031456	Tnpo-SR	99	42.519	ENSCANG00000033070	TNPO3	100	42.578	Colobus_angolensis_palliatus
FBgn0031456	Tnpo-SR	99	42.411	ENSCGRG00001015925	Tnpo3	99	42.411	Cricetulus_griseus_chok1gshd
FBgn0031456	Tnpo-SR	99	42.411	ENSCGRG00000010379	Tnpo3	99	42.411	Cricetulus_griseus_crigri
FBgn0031456	Tnpo-SR	99	43.380	ENSCSEG00000005952	tnpo3	99	43.380	Cynoglossus_semilaevis
FBgn0031456	Tnpo-SR	99	43.057	ENSCVAG00000020285	tnpo3	99	43.057	Cyprinodon_variegatus
FBgn0031456	Tnpo-SR	99	43.811	ENSDARG00000045680	tnpo3	99	43.969	Danio_rerio
FBgn0031456	Tnpo-SR	99	42.519	ENSDNOG00000002556	TNPO3	99	42.519	Dasypus_novemcinctus
FBgn0031456	Tnpo-SR	62	42.341	ENSDORG00000002433	Tnpo3	94	42.341	Dipodomys_ordii
FBgn0031456	Tnpo-SR	94	41.667	ENSETEG00000002101	TNPO3	89	41.667	Echinops_telfairi
FBgn0031456	Tnpo-SR	99	42.888	ENSEBUG00000016931	tnpo3	99	42.888	Eptatretus_burgeri
FBgn0031456	Tnpo-SR	99	42.411	ENSEASG00005008677	TNPO3	99	42.411	Equus_asinus_asinus
FBgn0031456	Tnpo-SR	99	42.411	ENSECAG00000012815	TNPO3	100	42.463	Equus_caballus
FBgn0031456	Tnpo-SR	99	39.641	ENSEEUG00000005178	TNPO3	98	39.641	Erinaceus_europaeus
FBgn0031456	Tnpo-SR	100	43.516	ENSELUG00000012153	tnpo3	100	43.516	Esox_lucius
FBgn0031456	Tnpo-SR	99	42.519	ENSFCAG00000018186	TNPO3	100	42.578	Felis_catus
FBgn0031456	Tnpo-SR	96	40.484	ENSFALG00000010667	TNPO3	100	40.484	Ficedula_albicollis
FBgn0031456	Tnpo-SR	99	42.320	ENSFDAG00000019578	TNPO3	99	42.320	Fukomys_damarensis
FBgn0031456	Tnpo-SR	99	42.981	ENSFHEG00000012859	tnpo3	99	42.981	Fundulus_heteroclitus
FBgn0031456	Tnpo-SR	99	43.272	ENSGMOG00000007324	tnpo3	99	43.272	Gadus_morhua
FBgn0031456	Tnpo-SR	61	41.873	ENSGALG00000039420	TNPO3	97	41.873	Gallus_gallus
FBgn0031456	Tnpo-SR	99	43.057	ENSGACG00000000699	tnpo3	99	43.272	Gasterosteus_aculeatus
FBgn0031456	Tnpo-SR	93	41.887	ENSGAGG00000006777	TNPO3	100	41.887	Gopherus_agassizii
FBgn0031456	Tnpo-SR	99	42.519	ENSGGOG00000008339	TNPO3	100	42.578	Gorilla_gorilla
FBgn0031456	Tnpo-SR	99	43.488	ENSHBUG00000008351	tnpo3	99	43.488	Haplochromis_burtoni
FBgn0031456	Tnpo-SR	99	42.519	ENSHGLG00000004463	TNPO3	99	42.519	Heterocephalus_glaber_female
FBgn0031456	Tnpo-SR	99	42.519	ENSHGLG00100005509	TNPO3	99	42.519	Heterocephalus_glaber_male
FBgn0031456	Tnpo-SR	99	42.734	ENSHCOG00000007221	tnpo3	99	42.734	Hippocampus_comes
FBgn0031456	Tnpo-SR	99	43.380	ENSIPUG00000014979	TNPO3	99	43.380	Ictalurus_punctatus
FBgn0031456	Tnpo-SR	99	42.519	ENSSTOG00000004885	TNPO3	100	42.578	Ictidomys_tridecemlineatus
FBgn0031456	Tnpo-SR	99	39.635	ENSJJAG00000013530	Tnpo3	99	39.635	Jaculus_jaculus
FBgn0031456	Tnpo-SR	99	43.380	ENSKMAG00000010497	tnpo3	99	43.380	Kryptolebias_marmoratus
FBgn0031456	Tnpo-SR	96	42.123	ENSLBEG00000016595	tnpo3	100	42.123	Labrus_bergylta
FBgn0031456	Tnpo-SR	96	41.229	ENSLBEG00000011988	-	99	41.157	Labrus_bergylta
FBgn0031456	Tnpo-SR	83	46.369	ENSLACG00000002351	TNPO3	99	46.369	Latimeria_chalumnae
FBgn0031456	Tnpo-SR	99	43.380	ENSLOCG00000015556	tnpo3	99	43.380	Lepisosteus_oculatus
FBgn0031456	Tnpo-SR	99	42.337	ENSLAFG00000002738	TNPO3	99	42.337	Loxodonta_africana
FBgn0031456	Tnpo-SR	99	42.519	ENSMFAG00000032385	TNPO3	100	42.578	Macaca_fascicularis
FBgn0031456	Tnpo-SR	99	42.519	ENSMMUG00000004311	TNPO3	100	42.578	Macaca_mulatta
FBgn0031456	Tnpo-SR	99	42.519	ENSMNEG00000045277	TNPO3	100	42.578	Macaca_nemestrina
FBgn0031456	Tnpo-SR	99	42.519	ENSMLEG00000037881	TNPO3	100	42.578	Mandrillus_leucophaeus
FBgn0031456	Tnpo-SR	99	43.703	ENSMAMG00000021096	tnpo3	99	43.703	Mastacembelus_armatus
FBgn0031456	Tnpo-SR	99	43.488	ENSMZEG00005015084	tnpo3	99	43.488	Maylandia_zebra
FBgn0031456	Tnpo-SR	79	41.700	ENSMGAG00000002839	TNPO3	99	41.700	Meleagris_gallopavo
FBgn0031456	Tnpo-SR	99	42.411	ENSMAUG00000013463	Tnpo3	99	42.411	Mesocricetus_auratus
FBgn0031456	Tnpo-SR	99	42.519	ENSMICG00000000140	TNPO3	99	42.582	Microcebus_murinus
FBgn0031456	Tnpo-SR	99	42.411	ENSMOCG00000013264	Tnpo3	99	42.411	Microtus_ochrogaster
FBgn0031456	Tnpo-SR	99	43.629	ENSMMOG00000005887	tnpo3	99	43.629	Mola_mola
FBgn0031456	Tnpo-SR	99	42.626	ENSMODG00000014700	TNPO3	99	42.626	Monodelphis_domestica
FBgn0031456	Tnpo-SR	99	43.380	ENSMALG00000006675	tnpo3	99	43.380	Monopterus_albus
FBgn0031456	Tnpo-SR	99	42.626	MGP_CAROLIEiJ_G0028176	Tnpo3	99	42.626	Mus_caroli
FBgn0031456	Tnpo-SR	99	42.626	ENSMUSG00000012535	Tnpo3	99	42.626	Mus_musculus
FBgn0031456	Tnpo-SR	99	42.626	MGP_PahariEiJ_G0021934	Tnpo3	99	42.626	Mus_pahari
FBgn0031456	Tnpo-SR	99	42.626	MGP_SPRETEiJ_G0029176	Tnpo3	99	42.626	Mus_spretus
FBgn0031456	Tnpo-SR	99	42.519	ENSMPUG00000006021	TNPO3	99	42.519	Mustela_putorius_furo
FBgn0031456	Tnpo-SR	99	38.751	ENSMLUG00000000947	TNPO3	99	38.751	Myotis_lucifugus
FBgn0031456	Tnpo-SR	99	42.411	ENSNGAG00000008722	Tnpo3	99	42.411	Nannospalax_galili
FBgn0031456	Tnpo-SR	99	43.011	ENSNBRG00000019001	tnpo3	99	43.498	Neolamprologus_brichardi
FBgn0031456	Tnpo-SR	99	40.914	ENSNLEG00000012491	TNPO3	99	42.582	Nomascus_leucogenys
FBgn0031456	Tnpo-SR	91	35.994	ENSMEUG00000002445	TNPO3	91	35.994	Notamacropus_eugenii
FBgn0031456	Tnpo-SR	90	45.810	ENSOPRG00000006163	TNPO3	89	45.810	Ochotona_princeps
FBgn0031456	Tnpo-SR	97	42.401	ENSODEG00000012826	TNPO3	99	42.401	Octodon_degus
FBgn0031456	Tnpo-SR	99	43.595	ENSONIG00000007604	tnpo3	99	43.595	Oreochromis_niloticus
FBgn0031456	Tnpo-SR	96	40.729	ENSOANG00000011451	TNPO3	100	40.729	Ornithorhynchus_anatinus
FBgn0031456	Tnpo-SR	99	40.857	ENSOCUG00000010105	TNPO3	98	40.857	Oryctolagus_cuniculus
FBgn0031456	Tnpo-SR	99	43.089	ENSORLG00000029369	tnpo3	99	43.089	Oryzias_latipes
FBgn0031456	Tnpo-SR	99	43.089	ENSORLG00020003464	tnpo3	99	43.089	Oryzias_latipes_hni
FBgn0031456	Tnpo-SR	99	43.089	ENSORLG00015002610	tnpo3	99	43.089	Oryzias_latipes_hsok
FBgn0031456	Tnpo-SR	99	43.057	ENSOMEG00000021006	tnpo3	99	43.057	Oryzias_melastigma
FBgn0031456	Tnpo-SR	99	42.626	ENSOGAG00000015340	TNPO3	99	42.626	Otolemur_garnettii
FBgn0031456	Tnpo-SR	99	42.626	ENSOARG00000004026	TNPO3	99	42.626	Ovis_aries
FBgn0031456	Tnpo-SR	99	42.519	ENSPPAG00000034975	TNPO3	100	42.578	Pan_paniscus
FBgn0031456	Tnpo-SR	99	42.519	ENSPPRG00000002050	TNPO3	99	42.582	Panthera_pardus
FBgn0031456	Tnpo-SR	99	42.519	ENSPTIG00000016167	TNPO3	99	42.582	Panthera_tigris_altaica
FBgn0031456	Tnpo-SR	99	42.519	ENSPTRG00000019676	TNPO3	100	42.578	Pan_troglodytes
FBgn0031456	Tnpo-SR	99	41.018	ENSPANG00000022226	TNPO3	99	42.582	Papio_anubis
FBgn0031456	Tnpo-SR	99	41.094	ENSPKIG00000008628	-	99	41.094	Paramormyrops_kingsleyae
FBgn0031456	Tnpo-SR	99	42.949	ENSPKIG00000023234	tnpo3	99	42.949	Paramormyrops_kingsleyae
FBgn0031456	Tnpo-SR	61	40.000	ENSPMGG00000009763	tnpo3	98	40.000	Periophthalmus_magnuspinnatus
FBgn0031456	Tnpo-SR	99	42.304	ENSPEMG00000000422	Tnpo3	99	42.304	Peromyscus_maniculatus_bairdii
FBgn0031456	Tnpo-SR	96	43.352	ENSPMAG00000008621	tnpo3	100	43.352	Petromyzon_marinus
FBgn0031456	Tnpo-SR	99	42.626	ENSPCIG00000011366	TNPO3	99	42.626	Phascolarctos_cinereus
FBgn0031456	Tnpo-SR	99	42.949	ENSPFOG00000013592	tnpo3	99	42.949	Poecilia_formosa
FBgn0031456	Tnpo-SR	99	42.949	ENSPLAG00000010188	tnpo3	99	42.949	Poecilia_latipinna
FBgn0031456	Tnpo-SR	99	42.949	ENSPMEG00000022731	tnpo3	99	42.949	Poecilia_mexicana
FBgn0031456	Tnpo-SR	99	42.519	ENSPPYG00000017990	TNPO3	99	42.519	Pongo_abelii
FBgn0031456	Tnpo-SR	99	37.331	ENSPCAG00000010158	TNPO3	98	37.331	Procavia_capensis
FBgn0031456	Tnpo-SR	99	34.446	ENSPCOG00000023901	TNPO3	95	44.918	Propithecus_coquereli
FBgn0031456	Tnpo-SR	99	39.666	ENSPVAG00000015757	TNPO3	98	39.666	Pteropus_vampyrus
FBgn0031456	Tnpo-SR	99	43.488	ENSPNYG00000002349	tnpo3	99	43.488	Pundamilia_nyererei
FBgn0031456	Tnpo-SR	99	43.305	ENSPNAG00000001142	tnpo3	99	43.305	Pygocentrus_nattereri
FBgn0031456	Tnpo-SR	99	42.519	ENSRNOG00000021758	Tnpo3	100	42.578	Rattus_norvegicus
FBgn0031456	Tnpo-SR	99	42.519	ENSRBIG00000042549	TNPO3	100	42.578	Rhinopithecus_bieti
FBgn0031456	Tnpo-SR	99	42.519	ENSRROG00000039264	TNPO3	99	42.582	Rhinopithecus_roxellana
FBgn0031456	Tnpo-SR	99	37.006	ENSSBOG00000029642	TNPO3	99	40.278	Saimiri_boliviensis_boliviensis
FBgn0031456	Tnpo-SR	96	42.682	ENSSHAG00000006837	TNPO3	100	42.682	Sarcophilus_harrisii
FBgn0031456	Tnpo-SR	99	43.380	ENSSFOG00015001474	tnpo3	99	43.380	Scleropages_formosus
FBgn0031456	Tnpo-SR	99	41.826	ENSSFOG00015004256	tnpo3	99	41.826	Scleropages_formosus
FBgn0031456	Tnpo-SR	99	43.272	ENSSMAG00000010422	tnpo3	96	43.272	Scophthalmus_maximus
FBgn0031456	Tnpo-SR	99	43.488	ENSSDUG00000004850	tnpo3	99	43.488	Seriola_dumerili
FBgn0031456	Tnpo-SR	99	43.488	ENSSLDG00000016927	tnpo3	99	43.488	Seriola_lalandi_dorsalis
FBgn0031456	Tnpo-SR	89	38.960	ENSSARG00000013893	TNPO3	92	38.960	Sorex_araneus
FBgn0031456	Tnpo-SR	99	40.387	ENSSPUG00000007457	TNPO3	98	40.387	Sphenodon_punctatus
FBgn0031456	Tnpo-SR	78	42.974	ENSSPAG00000014209	tnpo3	98	42.974	Stegastes_partitus
FBgn0031456	Tnpo-SR	99	42.519	ENSSSCG00000016572	TNPO3	100	42.578	Sus_scrofa
FBgn0031456	Tnpo-SR	99	43.133	ENSTNIG00000003347	tnpo3	99	43.133	Tetraodon_nigroviridis
FBgn0031456	Tnpo-SR	86	44.079	ENSTBEG00000007220	TNPO3	88	44.079	Tupaia_belangeri
FBgn0031456	Tnpo-SR	99	36.155	ENSTTRG00000014618	TNPO3	98	36.155	Tursiops_truncatus
FBgn0031456	Tnpo-SR	99	42.519	ENSUAMG00000021281	TNPO3	99	42.519	Ursus_americanus
FBgn0031456	Tnpo-SR	99	42.519	ENSUMAG00000006882	TNPO3	99	42.519	Ursus_maritimus
FBgn0031456	Tnpo-SR	85	37.303	ENSVPAG00000006166	TNPO3	88	37.303	Vicugna_pacos
FBgn0031456	Tnpo-SR	99	42.519	ENSVVUG00000011004	TNPO3	99	42.320	Vulpes_vulpes
FBgn0031456	Tnpo-SR	99	41.139	ENSXETG00000015009	tnpo3	99	41.139	Xenopus_tropicalis
FBgn0031456	Tnpo-SR	99	42.949	ENSXMAG00000013062	tnpo3	99	42.949	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005634	nucleus	12134081.	IDA	Component
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0005829	cytosol	12134081.	IDA	Component
GO:0006606	protein import into nucleus	21873635.	IBA	Process
GO:0006606	protein import into nucleus	12134081.	IDA	Process
GO:0008536	Ran GTPase binding	-	IEA	Function
GO:0008565	protein transporter activity	21873635.	IBA	Function
GO:0048024	regulation of mRNA splicing, via spliceosome	12134081.	IDA	Process