EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0031643 (Gene tree)
Gene ID: 33693
Gene Symbol: CG3008
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Plus strand
Length: 2372 bases
Position: chr2L:4883298-4885669
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0077081	RIO1	PF01163.22	1.5e-73	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0077389	-	2263	-	FBpp0077081	603 (aa)	-	Q9VR42

Gene Model

Click here to download FBgn0031643's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0031643's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0031643	CG3008	84	42.578	ENSG00000101782	RIOK3	89	43.975	Homo_sapiens
FBgn0031643	CG3008	76	46.122	ENSAPOG00000020861	riok3	88	45.263	Acanthochromis_polyacanthus
FBgn0031643	CG3008	84	43.275	ENSAMEG00000013754	RIOK3	74	42.495	Ailuropoda_melanoleuca
FBgn0031643	CG3008	84	44.078	ENSACIG00000019894	riok3	90	46.232	Amphilophus_citrinellus
FBgn0031643	CG3008	76	45.551	ENSAOCG00000007172	riok3	88	44.421	Amphiprion_ocellaris
FBgn0031643	CG3008	76	45.975	ENSAPEG00000002536	riok3	88	44.842	Amphiprion_percula
FBgn0031643	CG3008	76	46.186	ENSATEG00000018303	riok3	89	46.186	Anabas_testudineus
FBgn0031643	CG3008	86	41.917	ENSAPLG00000006497	RIOK3	91	41.088	Anas_platyrhynchos
FBgn0031643	CG3008	83	42.323	ENSACAG00000000159	RIOK3	86	41.279	Anolis_carolinensis
FBgn0031643	CG3008	53	50.157	ENSANAG00000030146	RIOK3	68	50.157	Aotus_nancymaae
FBgn0031643	CG3008	69	48.926	ENSACLG00000018966	riok3	81	48.926	Astatotilapia_calliptera
FBgn0031643	CG3008	78	42.974	ENSAMXG00000015617	riok3	91	42.974	Astyanax_mexicanus
FBgn0031643	CG3008	84	43.164	ENSBTAG00000010042	RIOK3	87	42.383	Bos_taurus
FBgn0031643	CG3008	83	32.752	WBGene00014012	riok-3	62	40.116	Caenorhabditis_elegans
FBgn0031643	CG3008	84	42.969	ENSCJAG00000020556	RIOK3	87	42.188	Callithrix_jacchus
FBgn0031643	CG3008	84	42.969	ENSCAFG00000018201	RIOK3	87	42.188	Canis_familiaris
FBgn0031643	CG3008	84	42.969	ENSCAFG00020014801	RIOK3	90	47.583	Canis_lupus_dingo
FBgn0031643	CG3008	84	43.164	ENSCHIG00000009312	RIOK3	90	42.136	Capra_hircus
FBgn0031643	CG3008	84	42.969	ENSTSYG00000000142	RIOK3	95	42.798	Carlito_syrichta
FBgn0031643	CG3008	71	46.818	ENSCAPG00000005756	RIOK3	82	46.698	Cavia_aperea
FBgn0031643	CG3008	84	42.773	ENSCPOG00000007991	RIOK3	87	41.779	Cavia_porcellus
FBgn0031643	CG3008	84	42.969	ENSCCAG00000028338	RIOK3	95	42.710	Cebus_capucinus
FBgn0031643	CG3008	84	42.578	ENSCATG00000040824	RIOK3	96	42.387	Cercocebus_atys
FBgn0031643	CG3008	84	42.969	ENSCLAG00000006767	RIOK3	87	41.973	Chinchilla_lanigera
FBgn0031643	CG3008	84	42.578	ENSCSAG00000017680	RIOK3	87	41.797	Chlorocebus_sabaeus
FBgn0031643	CG3008	70	51.111	ENSCHOG00000008343	RIOK3	73	51.111	Choloepus_hoffmanni
FBgn0031643	CG3008	84	42.661	ENSCPBG00000027226	RIOK3	87	41.602	Chrysemys_picta_bellii
FBgn0031643	CG3008	70	43.349	ENSCSAVG00000003068	-	88	42.792	Ciona_savignyi
FBgn0031643	CG3008	69	40.284	ENSCANG00000035939	RIOK3	87	39.467	Colobus_angolensis_palliatus
FBgn0031643	CG3008	70	47.454	ENSCGRG00001013249	Riok3	87	41.973	Cricetulus_griseus_chok1gshd
FBgn0031643	CG3008	70	47.222	ENSCGRG00000017636	Riok3	87	41.779	Cricetulus_griseus_crigri
FBgn0031643	CG3008	82	43.243	ENSCSEG00000018289	riok3	98	44.378	Cynoglossus_semilaevis
FBgn0031643	CG3008	76	45.648	ENSCVAG00000011848	riok3	88	45.648	Cyprinodon_variegatus
FBgn0031643	CG3008	86	41.808	ENSDARG00000042751	riok3	92	41.541	Danio_rerio
FBgn0031643	CG3008	84	42.969	ENSDNOG00000039433	RIOK3	87	42.188	Dasypus_novemcinctus
FBgn0031643	CG3008	84	43.359	ENSDORG00000011663	Riok3	87	42.360	Dipodomys_ordii
FBgn0031643	CG3008	84	42.188	ENSETEG00000003689	RIOK3	93	41.406	Echinops_telfairi
FBgn0031643	CG3008	70	42.563	ENSEBUG00000000555	riok3	81	41.950	Eptatretus_burgeri
FBgn0031643	CG3008	84	42.802	ENSEASG00005002317	RIOK3	88	42.023	Equus_asinus_asinus
FBgn0031643	CG3008	84	42.607	ENSECAG00000009028	RIOK3	88	41.829	Equus_caballus
FBgn0031643	CG3008	62	42.448	ENSEEUG00000007005	RIOK3	68	44.092	Erinaceus_europaeus
FBgn0031643	CG3008	86	41.887	ENSELUG00000017655	riok3	92	41.509	Esox_lucius
FBgn0031643	CG3008	84	42.773	ENSFCAG00000000517	RIOK3	87	41.992	Felis_catus
FBgn0031643	CG3008	86	43.454	ENSFALG00000006145	RIOK3	90	42.293	Ficedula_albicollis
FBgn0031643	CG3008	84	42.773	ENSFDAG00000001548	RIOK3	87	41.779	Fukomys_damarensis
FBgn0031643	CG3008	73	44.667	ENSFHEG00000011350	riok3	88	43.737	Fundulus_heteroclitus
FBgn0031643	CG3008	71	45.662	ENSGMOG00000005157	riok3	90	45.125	Gadus_morhua
FBgn0031643	CG3008	86	42.286	ENSGALG00000015004	RIOK3	90	41.353	Gallus_gallus
FBgn0031643	CG3008	76	41.102	ENSGAFG00000002403	riok3	85	40.042	Gambusia_affinis
FBgn0031643	CG3008	76	45.263	ENSGACG00000000880	riok3	88	44.561	Gasterosteus_aculeatus
FBgn0031643	CG3008	84	42.353	ENSGAGG00000024785	RIOK3	87	41.602	Gopherus_agassizii
FBgn0031643	CG3008	84	44.444	ENSHBUG00000003233	riok3	88	45.860	Haplochromis_burtoni
FBgn0031643	CG3008	84	42.969	ENSHGLG00000003885	RIOK3	87	41.973	Heterocephalus_glaber_female
FBgn0031643	CG3008	84	42.969	ENSHGLG00100002077	RIOK3	87	41.973	Heterocephalus_glaber_male
FBgn0031643	CG3008	78	43.776	ENSHCOG00000006794	riok3	89	43.776	Hippocampus_comes
FBgn0031643	CG3008	86	40.377	ENSIPUG00000001406	Riok3	92	40.377	Ictalurus_punctatus
FBgn0031643	CG3008	84	43.164	ENSSTOG00000006517	RIOK3	87	42.166	Ictidomys_tridecemlineatus
FBgn0031643	CG3008	84	43.555	ENSJJAG00000023689	Riok3	86	42.969	Jaculus_jaculus
FBgn0031643	CG3008	76	45.798	ENSKMAG00000007259	riok3	88	45.798	Kryptolebias_marmoratus
FBgn0031643	CG3008	76	45.378	ENSLBEG00000013689	riok3	88	45.378	Labrus_bergylta
FBgn0031643	CG3008	86	40.341	ENSLACG00000017326	RIOK3	91	39.583	Latimeria_chalumnae
FBgn0031643	CG3008	86	41.445	ENSLOCG00000001652	riok3	90	41.445	Lepisosteus_oculatus
FBgn0031643	CG3008	86	42.750	ENSLAFG00000001380	RIOK3	90	42.185	Loxodonta_africana
FBgn0031643	CG3008	84	42.578	ENSMMUG00000021478	RIOK3	96	42.387	Macaca_mulatta
FBgn0031643	CG3008	69	40.845	ENSMNEG00000041106	RIOK3	79	39.906	Macaca_nemestrina
FBgn0031643	CG3008	84	42.578	ENSMLEG00000028187	RIOK3	96	42.387	Mandrillus_leucophaeus
FBgn0031643	CG3008	76	45.455	ENSMAMG00000008502	riok3	88	45.455	Mastacembelus_armatus
FBgn0031643	CG3008	84	44.250	ENSMZEG00005020212	riok3	88	46.285	Maylandia_zebra
FBgn0031643	CG3008	86	42.095	ENSMGAG00000010079	RIOK3	90	41.165	Meleagris_gallopavo
FBgn0031643	CG3008	84	42.969	ENSMAUG00000020527	Riok3	87	41.973	Mesocricetus_auratus
FBgn0031643	CG3008	84	42.969	ENSMICG00000009293	RIOK3	87	42.188	Microcebus_murinus
FBgn0031643	CG3008	68	48.210	ENSMOCG00000012114	Riok3	74	46.934	Microtus_ochrogaster
FBgn0031643	CG3008	70	44.651	ENSMMOG00000019204	riok3	82	44.651	Mola_mola
FBgn0031643	CG3008	84	43.164	ENSMODG00000021496	RIOK3	87	42.773	Monodelphis_domestica
FBgn0031643	CG3008	76	45.877	ENSMALG00000020848	riok3	88	44.748	Monopterus_albus
FBgn0031643	CG3008	84	42.969	MGP_CAROLIEiJ_G0022001	Riok3	87	41.973	Mus_caroli
FBgn0031643	CG3008	84	42.969	ENSMUSG00000024404	Riok3	97	77.966	Mus_musculus
FBgn0031643	CG3008	84	42.969	MGP_PahariEiJ_G0018739	Riok3	87	41.973	Mus_pahari
FBgn0031643	CG3008	84	42.773	ENSMPUG00000005772	RIOK3	87	41.992	Mustela_putorius_furo
FBgn0031643	CG3008	84	43.164	ENSMLUG00000007081	RIOK3	87	42.383	Myotis_lucifugus
FBgn0031643	CG3008	86	42.614	ENSNGAG00000011446	Riok3	90	41.651	Nannospalax_galili
FBgn0031643	CG3008	65	54.167	ENSNBRG00000016677	riok3	73	54.167	Neolamprologus_brichardi
FBgn0031643	CG3008	84	42.383	ENSNLEG00000006758	RIOK3	94	42.181	Nomascus_leucogenys
FBgn0031643	CG3008	86	42.424	ENSMEUG00000006292	RIOK3	90	42.045	Notamacropus_eugenii
FBgn0031643	CG3008	70	47.356	ENSOPRG00000004803	RIOK3	90	41.856	Ochotona_princeps
FBgn0031643	CG3008	84	42.578	ENSODEG00000006444	RIOK3	87	41.586	Octodon_degus
FBgn0031643	CG3008	70	47.664	ENSONIG00000013422	riok3	92	44.167	Oreochromis_niloticus
FBgn0031643	CG3008	70	47.113	ENSOANG00000012074	RIOK3	84	46.101	Ornithorhynchus_anatinus
FBgn0031643	CG3008	84	43.359	ENSOCUG00000016820	RIOK3	87	42.360	Oryctolagus_cuniculus
FBgn0031643	CG3008	76	46.186	ENSORLG00000003395	riok3	88	46.186	Oryzias_latipes
FBgn0031643	CG3008	76	46.186	ENSORLG00020000672	riok3	88	46.186	Oryzias_latipes_hni
FBgn0031643	CG3008	76	46.186	ENSORLG00015007372	riok3	88	46.186	Oryzias_latipes_hsok
FBgn0031643	CG3008	76	45.957	ENSOMEG00000001380	riok3	88	45.957	Oryzias_melastigma
FBgn0031643	CG3008	84	42.969	ENSOGAG00000014502	RIOK3	78	42.188	Otolemur_garnettii
FBgn0031643	CG3008	84	43.164	ENSOARG00000008042	RIOK3	87	42.383	Ovis_aries
FBgn0031643	CG3008	84	42.578	ENSPPAG00000030258	RIOK3	95	42.300	Pan_paniscus
FBgn0031643	CG3008	84	42.773	ENSPPRG00000023302	RIOK3	87	41.992	Panthera_pardus
FBgn0031643	CG3008	84	42.773	ENSPTIG00000000960	RIOK3	87	41.992	Panthera_tigris_altaica
FBgn0031643	CG3008	84	42.578	ENSPTRG00000009918	RIOK3	95	42.300	Pan_troglodytes
FBgn0031643	CG3008	84	42.578	ENSPANG00000011485	RIOK3	96	42.387	Papio_anubis
FBgn0031643	CG3008	85	40.848	ENSPKIG00000018297	riok3	90	39.139	Paramormyrops_kingsleyae
FBgn0031643	CG3008	84	43.026	ENSPSIG00000006250	RIOK3	87	42.383	Pelodiscus_sinensis
FBgn0031643	CG3008	78	44.106	ENSPMGG00000009414	riok3	98	44.106	Periophthalmus_magnuspinnatus
FBgn0031643	CG3008	77	43.354	ENSPEMG00000023794	Riok3	90	42.308	Peromyscus_maniculatus_bairdii
FBgn0031643	CG3008	70	46.991	ENSPMAG00000003258	riok3	93	46.437	Petromyzon_marinus
FBgn0031643	CG3008	72	45.982	ENSPCIG00000013991	RIOK3	88	45.536	Phascolarctos_cinereus
FBgn0031643	CG3008	76	45.106	ENSPFOG00000024127	riok3	88	44.397	Poecilia_formosa
FBgn0031643	CG3008	76	45.435	ENSPLAG00000004956	riok3	88	44.726	Poecilia_latipinna
FBgn0031643	CG3008	76	45.435	ENSPMEG00000020108	riok3	93	44.766	Poecilia_mexicana
FBgn0031643	CG3008	76	45.032	ENSPREG00000010010	riok3	88	44.328	Poecilia_reticulata
FBgn0031643	CG3008	84	38.867	ENSPPYG00000009062	RIOK3	86	38.086	Pongo_abelii
FBgn0031643	CG3008	64	46.316	ENSPCAG00000001021	RIOK3	67	46.316	Procavia_capensis
FBgn0031643	CG3008	84	42.969	ENSPCOG00000022631	RIOK3	95	42.798	Propithecus_coquereli
FBgn0031643	CG3008	73	47.396	ENSPVAG00000015817	RIOK3	76	47.396	Pteropus_vampyrus
FBgn0031643	CG3008	84	44.834	ENSPNYG00000003271	riok3	88	46.072	Pundamilia_nyererei
FBgn0031643	CG3008	79	42.713	ENSPNAG00000006213	riok3	92	41.633	Pygocentrus_nattereri
FBgn0031643	CG3008	70	46.759	ENSRNOG00000023376	Riok3	87	41.586	Rattus_norvegicus
FBgn0031643	CG3008	84	42.578	ENSRBIG00000035071	RIOK3	96	42.387	Rhinopithecus_bieti
FBgn0031643	CG3008	84	42.270	ENSRROG00000045710	RIOK3	96	42.387	Rhinopithecus_roxellana
FBgn0031643	CG3008	84	42.969	ENSSBOG00000034387	RIOK3	95	42.710	Saimiri_boliviensis_boliviensis
FBgn0031643	CG3008	84	42.773	ENSSHAG00000011854	RIOK3	87	42.383	Sarcophilus_harrisii
FBgn0031643	CG3008	86	41.905	ENSSFOG00015012912	riok3	92	39.483	Scleropages_formosus
FBgn0031643	CG3008	78	44.742	ENSSMAG00000011527	riok3	90	43.852	Scophthalmus_maximus
FBgn0031643	CG3008	84	43.301	ENSSDUG00000016018	riok3	90	42.748	Seriola_dumerili
FBgn0031643	CG3008	50	52.055	ENSSLDG00000022246	riok3	86	52.055	Seriola_lalandi_dorsalis
FBgn0031643	CG3008	66	58.333	ENSSARG00000010154	RIOK3	68	58.333	Sorex_araneus
FBgn0031643	CG3008	86	42.125	ENSSPUG00000015246	RIOK3	90	41.098	Sphenodon_punctatus
FBgn0031643	CG3008	84	43.665	ENSSPAG00000000601	riok3	88	43.665	Stegastes_partitus
FBgn0031643	CG3008	75	53.333	ENSSSCG00000029518	RIOK3	85	53.333	Sus_scrofa
FBgn0031643	CG3008	86	43.833	ENSTGUG00000010392	RIOK3	90	42.669	Taeniopygia_guttata
FBgn0031643	CG3008	84	42.661	ENSTRUG00000007055	riok3	87	42.661	Takifugu_rubripes
FBgn0031643	CG3008	82	42.771	ENSTNIG00000001855	riok3	89	42.771	Tetraodon_nigroviridis
FBgn0031643	CG3008	84	44.118	ENSTTRG00000008839	RIOK3	87	43.333	Tursiops_truncatus
FBgn0031643	CG3008	84	42.308	ENSUAMG00000018410	RIOK3	88	41.538	Ursus_americanus
FBgn0031643	CG3008	84	42.308	ENSUMAG00000020218	RIOK3	87	41.538	Ursus_maritimus
FBgn0031643	CG3008	84	43.164	ENSVPAG00000009034	RIOK3	87	42.383	Vicugna_pacos
FBgn0031643	CG3008	84	42.969	ENSVVUG00000003651	RIOK3	66	42.188	Vulpes_vulpes
FBgn0031643	CG3008	87	41.835	ENSXETG00000027370	riok3	95	40.693	Xenopus_tropicalis
FBgn0031643	CG3008	84	42.690	ENSXCOG00000001032	riok3	91	41.942	Xiphophorus_couchianus
FBgn0031643	CG3008	76	46.072	ENSXMAG00000012902	riok3	88	45.359	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0004672	protein kinase activity	-	ISS	Function
GO:0004674	protein serine/threonine kinase activity	21873635.	IBA	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005634	nucleus	-	ISS	Component
GO:0005737	cytoplasm	-	ISS	Component
GO:0005829	cytosol	21873635.	IBA	Component
GO:0006468	protein phosphorylation	-	ISS	Process
GO:0030490	maturation of SSU-rRNA	21873635.	IBA	Process
GO:0030688	preribosome, small subunit precursor	21873635.	IBA	Component