EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0032388 (Gene tree)
Gene ID: 34608
Gene Symbol: CG6686
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Minus strand
Length: 3713 bases
Position: chr2L:11984327-11988039
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0088538	SART-1	PF03343.13	4.7e-148	1	1
FBpp0088537	SART-1	PF03343.13	4.8e-148	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0301171	-	3192	-	FBpp0290394	109 (aa)	-	E1JHG4
FBtr0089572	-	3187	-	FBpp0088537	970 (aa)	-	Q95TU2
FBtr0089573	-	3169	-	FBpp0088538	964 (aa)	-	Q6NNA4

Gene Model

Click here to download FBgn0032388's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0032388's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0032388	CG6686	62	47.126	ENSAMEG00000017260	SART1	97	40.680	Ailuropoda_melanoleuca
FBgn0032388	CG6686	66	47.126	ENSANAG00000037219	SART1	69	61.538	Aotus_nancymaae
FBgn0032388	CG6686	69	47.510	ENSBTAG00000003094	SART1	85	40.053	Bos_taurus
FBgn0032388	CG6686	54	38.372	WBGene00017605	F19F10.9	85	34.422	Caenorhabditis_elegans
FBgn0032388	CG6686	66	47.126	ENSCJAG00000001741	SART1	85	40.860	Callithrix_jacchus
FBgn0032388	CG6686	70	46.743	ENSCAFG00000013103	SART1	85	40.293	Canis_familiaris
FBgn0032388	CG6686	70	47.126	ENSCAFG00020015337	SART1	85	40.426	Canis_lupus_dingo
FBgn0032388	CG6686	70	47.510	ENSCHIG00000016364	SART1	86	39.894	Capra_hircus
FBgn0032388	CG6686	58	45.116	ENSTSYG00000029994	SART1	91	37.712	Carlito_syrichta
FBgn0032388	CG6686	63	47.126	ENSCAPG00000016369	SART1	97	39.947	Cavia_aperea
FBgn0032388	CG6686	63	46.992	ENSCPOG00000020882	SART1	99	40.501	Cavia_porcellus
FBgn0032388	CG6686	66	47.126	ENSCCAG00000037852	SART1	69	61.538	Cebus_capucinus
FBgn0032388	CG6686	62	47.126	ENSCATG00000032953	SART1	70	61.538	Cercocebus_atys
FBgn0032388	CG6686	72	47.126	ENSCLAG00000016593	SART1	85	40.830	Chinchilla_lanigera
FBgn0032388	CG6686	66	47.510	ENSCPBG00000023434	SART1	91	36.683	Chrysemys_picta_bellii
FBgn0032388	CG6686	84	34.507	ENSCING00000009048	-	83	35.425	Ciona_intestinalis
FBgn0032388	CG6686	78	32.552	ENSCSAVG00000009337	-	94	32.513	Ciona_savignyi
FBgn0032388	CG6686	51	44.395	ENSCANG00000043164	SART1	79	39.274	Colobus_angolensis_palliatus
FBgn0032388	CG6686	74	40.374	ENSCGRG00001021367	Sart1	85	41.562	Cricetulus_griseus_chok1gshd
FBgn0032388	CG6686	63	47.126	ENSCGRG00000015292	Sart1	98	39.844	Cricetulus_griseus_crigri
FBgn0032388	CG6686	71	39.510	ENSCVAG00000009800	SART1	88	39.077	Cyprinodon_variegatus
FBgn0032388	CG6686	53	37.006	ENSDNOG00000041860	-	89	33.232	Dasypus_novemcinctus
FBgn0032388	CG6686	64	47.126	ENSDORG00000011887	Sart1	89	38.400	Dipodomys_ordii
FBgn0032388	CG6686	66	47.126	ENSEASG00005004465	SART1	85	40.559	Equus_asinus_asinus
FBgn0032388	CG6686	66	47.126	ENSECAG00000023491	TSGA10IP	79	40.426	Equus_caballus
FBgn0032388	CG6686	66	47.126	ENSFCAG00000013278	SART1	85	40.634	Felis_catus
FBgn0032388	CG6686	78	35.919	ENSGAGG00000022783	SART1	84	38.889	Gopherus_agassizii
FBgn0032388	CG6686	66	47.126	ENSGGOG00000009457	SART1	70	61.538	Gorilla_gorilla
FBgn0032388	CG6686	70	47.126	ENSHGLG00000015022	SART1	96	38.683	Heterocephalus_glaber_female
FBgn0032388	CG6686	82	38.671	ENSHCOG00000007259	SART1	87	40.680	Hippocampus_comes
FBgn0032388	CG6686	71	40.897	ENSIPUG00000021117	sart1	88	40.984	Ictalurus_punctatus
FBgn0032388	CG6686	66	47.126	ENSSTOG00000023375	SART1	85	40.915	Ictidomys_tridecemlineatus
FBgn0032388	CG6686	66	47.126	ENSJJAG00000019103	Sart1	85	40.027	Jaculus_jaculus
FBgn0032388	CG6686	66	47.710	ENSLAFG00000001768	SART1	90	41.263	Loxodonta_africana
FBgn0032388	CG6686	71	47.126	ENSMFAG00000002484	SART1	70	61.538	Macaca_fascicularis
FBgn0032388	CG6686	62	47.126	ENSMNEG00000035507	SART1	70	61.538	Macaca_nemestrina
FBgn0032388	CG6686	70	47.126	ENSMAUG00000016274	Sart1	85	40.617	Mesocricetus_auratus
FBgn0032388	CG6686	70	47.126	ENSMICG00000030096	SART1	85	40.587	Microcebus_murinus
FBgn0032388	CG6686	66	47.126	ENSMOCG00000019815	Sart1	85	40.483	Microtus_ochrogaster
FBgn0032388	CG6686	76	39.064	ENSMMOG00000004019	SART1	96	39.003	Mola_mola
FBgn0032388	CG6686	54	38.070	ENSMODG00000009047	SART1	71	39.054	Monodelphis_domestica
FBgn0032388	CG6686	62	47.126	MGP_CAROLIEiJ_G0022545	Sart1	85	40.428	Mus_caroli
FBgn0032388	CG6686	62	47.126	ENSMUSG00000039148	Sart1	85	40.428	Mus_musculus
FBgn0032388	CG6686	74	47.126	MGP_PahariEiJ_G0014042	Sart1	85	40.562	Mus_pahari
FBgn0032388	CG6686	62	47.126	MGP_SPRETEiJ_G0023459	Sart1	85	40.428	Mus_spretus
FBgn0032388	CG6686	66	47.126	ENSMPUG00000011394	SART1	86	40.584	Mustela_putorius_furo
FBgn0032388	CG6686	66	47.126	ENSMLUG00000011078	SART1	85	39.894	Myotis_lucifugus
FBgn0032388	CG6686	64	47.126	ENSNGAG00000004727	Sart1	90	40.314	Nannospalax_galili
FBgn0032388	CG6686	70	47.126	ENSOGAG00000016523	SART1	85	40.562	Otolemur_garnettii
FBgn0032388	CG6686	63	47.510	ENSOARG00000000694	SART1	98	40.080	Ovis_aries
FBgn0032388	CG6686	62	47.126	ENSPPAG00000030167	SART1	69	61.538	Pan_paniscus
FBgn0032388	CG6686	65	35.866	ENSPTIG00000017833	SART1	97	36.309	Panthera_tigris_altaica
FBgn0032388	CG6686	62	47.126	ENSPTRG00000003905	SART1	69	61.538	Pan_troglodytes
FBgn0032388	CG6686	62	47.126	ENSPANG00000023502	SART1	74	61.538	Papio_anubis
FBgn0032388	CG6686	63	47.510	ENSPSIG00000002712	SART1	86	38.019	Pelodiscus_sinensis
FBgn0032388	CG6686	63	47.710	ENSPEMG00000012166	Sart1	91	40.505	Peromyscus_maniculatus_bairdii
FBgn0032388	CG6686	69	47.510	ENSPCIG00000008311	SART1	84	39.024	Phascolarctos_cinereus
FBgn0032388	CG6686	70	47.126	ENSPCOG00000008448	SART1	85	40.646	Propithecus_coquereli
FBgn0032388	CG6686	69	42.913	ENSPVAG00000016969	SART1	85	38.701	Pteropus_vampyrus
FBgn0032388	CG6686	68	47.126	ENSRNOG00000020475	Sart1	85	40.483	Rattus_norvegicus
FBgn0032388	CG6686	62	47.126	ENSRBIG00000044079	SART1	68	61.538	Rhinopithecus_bieti
FBgn0032388	CG6686	62	47.126	ENSRROG00000045251	SART1	68	61.538	Rhinopithecus_roxellana
FBgn0032388	CG6686	62	47.510	ENSSHAG00000011437	SART1	89	38.399	Sarcophilus_harrisii
FBgn0032388	CG6686	63	40.916	ENSSFOG00015018792	SART1	83	40.769	Scleropages_formosus
FBgn0032388	CG6686	75	40.181	ENSSDUG00000019131	SART1	96	39.689	Seriola_dumerili
FBgn0032388	CG6686	71	41.144	ENSSLDG00000024307	SART1	88	40.761	Seriola_lalandi_dorsalis
FBgn0032388	CG6686	62	48.276	ENSSPUG00000009399	SART1	86	38.978	Sphenodon_punctatus
FBgn0032388	CG6686	76	39.467	ENSSPAG00000013156	SART1	93	39.664	Stegastes_partitus
FBgn0032388	CG6686	69	47.126	ENSSSCG00000012963	SART1	85	40.241	Sus_scrofa
FBgn0032388	CG6686	56	31.779	ENSTBEG00000010370	-	95	33.735	Tupaia_belangeri
FBgn0032388	CG6686	70	47.126	ENSTTRG00000008751	SART1	85	38.358	Tursiops_truncatus
FBgn0032388	CG6686	58	42.234	ENSUMAG00000010903	SART1	91	41.967	Ursus_maritimus
FBgn0032388	CG6686	62	47.126	ENSVVUG00000027041	SART1	85	40.426	Vulpes_vulpes
FBgn0032388	CG6686	73	38.710	ENSXETG00000011429	sart1	90	39.757	Xenopus_tropicalis
FBgn0032388	CG6686	85	36.101	ENSXCOG00000005296	SART1	93	35.766	Xiphophorus_couchianus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000398	mRNA splicing, via spliceosome	18981222.	IC	Process
GO:0000481	maturation of 5S rRNA	21873635.	IBA	Process
GO:0003723	RNA binding	-	ISS	Function
GO:0010628	positive regulation of gene expression	24643257.	IMP	Process
GO:0045292	mRNA cis splicing, via spliceosome	21873635.	IBA	Process
GO:0046540	U4/U6 x U5 tri-snRNP complex	21873635.	IBA	Component
GO:0071011	precatalytic spliceosome	18981222.	HDA	Component