EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0032720 (Gene tree)
Gene ID: 35145
Gene Symbol: mRpL13
Alias: -
Full Name: mitochondrial ribosomal protein L13
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: confidence
Strand: Minus strand
Length: 1221 bases
Position: chr2L:18858028-18859248
Accession: FBgn0032720
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0088360	Ribosomal_L13	PF00572.18	3e-37	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27378189	Global changes of the RNA bound proteome during the maternal-to-zygotic transition in Drosophila	IC & embryos.MZT	2016 Jul 5	Sysoev VO	DOI: 10.1038/ncomms12128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0089318	-	671	-	FBpp0088360	178 (aa)	-	Q9VJ38

Gene Model

Click here to download FBgn0032720's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0032720's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0032720	mRpL13	99	47.159	ENSG00000172172	MRPL13	99	47.159	Homo_sapiens
FBgn0032720	mRpL13	99	46.328	ENSAPOG00000004881	mrpl13	99	46.328	Acanthochromis_polyacanthus
FBgn0032720	mRpL13	99	48.864	ENSAMEG00000002225	MRPL13	99	48.864	Ailuropoda_melanoleuca
FBgn0032720	mRpL13	99	43.503	ENSACIG00000011101	mrpl13	99	43.503	Amphilophus_citrinellus
FBgn0032720	mRpL13	99	46.328	ENSAOCG00000001749	mrpl13	99	46.328	Amphiprion_ocellaris
FBgn0032720	mRpL13	99	46.328	ENSAPEG00000019583	mrpl13	99	46.328	Amphiprion_percula
FBgn0032720	mRpL13	99	45.763	ENSATEG00000023882	mrpl13	99	45.763	Anabas_testudineus
FBgn0032720	mRpL13	94	48.503	ENSACAG00000009255	MRPL13	79	48.503	Anolis_carolinensis
FBgn0032720	mRpL13	99	48.295	ENSANAG00000033601	MRPL13	99	48.295	Aotus_nancymaae
FBgn0032720	mRpL13	99	44.633	ENSACLG00000013200	mrpl13	99	44.633	Astatotilapia_calliptera
FBgn0032720	mRpL13	99	48.023	ENSAMXG00000041931	mrpl13	99	48.023	Astyanax_mexicanus
FBgn0032720	mRpL13	99	49.432	ENSBTAG00000006767	MRPL13	99	49.432	Bos_taurus
FBgn0032720	mRpL13	97	35.465	WBGene00008769	mrpl-13	84	35.465	Caenorhabditis_elegans
FBgn0032720	mRpL13	99	47.727	ENSCJAG00000023047	-	99	47.727	Callithrix_jacchus
FBgn0032720	mRpL13	99	47.727	ENSCJAG00000005359	-	99	47.727	Callithrix_jacchus
FBgn0032720	mRpL13	99	47.727	ENSCAFG00000000940	MRPL13	99	47.727	Canis_familiaris
FBgn0032720	mRpL13	94	47.904	ENSCAFG00020005790	MRPL13	97	47.904	Canis_lupus_dingo
FBgn0032720	mRpL13	99	47.159	ENSCHIG00000013190	-	99	47.159	Capra_hircus
FBgn0032720	mRpL13	99	40.341	ENSCHIG00000008412	-	84	40.341	Capra_hircus
FBgn0032720	mRpL13	94	49.701	ENSCHIG00000024054	-	97	49.701	Capra_hircus
FBgn0032720	mRpL13	99	41.243	ENSCHIG00000006914	-	99	41.243	Capra_hircus
FBgn0032720	mRpL13	70	50.806	ENSTSYG00000011331	MRPL13	86	51.261	Carlito_syrichta
FBgn0032720	mRpL13	95	49.704	ENSCAPG00000006896	MRPL13	100	49.704	Cavia_aperea
FBgn0032720	mRpL13	99	48.295	ENSCPOG00000005791	MRPL13	99	48.295	Cavia_porcellus
FBgn0032720	mRpL13	99	47.727	ENSCCAG00000034544	MRPL13	99	47.727	Cebus_capucinus
FBgn0032720	mRpL13	99	47.159	ENSCATG00000044803	MRPL13	99	47.159	Cercocebus_atys
FBgn0032720	mRpL13	99	48.295	ENSCLAG00000005646	MRPL13	99	48.295	Chinchilla_lanigera
FBgn0032720	mRpL13	99	47.159	ENSCSAG00000010722	MRPL13	99	47.159	Chlorocebus_sabaeus
FBgn0032720	mRpL13	99	40.782	ENSCHOG00000006926	MRPL13	99	40.782	Choloepus_hoffmanni
FBgn0032720	mRpL13	98	48.851	ENSCPBG00000015289	MRPL13	63	48.851	Chrysemys_picta_bellii
FBgn0032720	mRpL13	100	36.264	ENSCING00000005447	-	100	36.264	Ciona_intestinalis
FBgn0032720	mRpL13	99	46.591	ENSCANG00000041741	MRPL13	99	46.591	Colobus_angolensis_palliatus
FBgn0032720	mRpL13	99	48.864	ENSCGRG00001015700	Mrpl13	99	48.864	Cricetulus_griseus_chok1gshd
FBgn0032720	mRpL13	56	52.525	ENSCGRG00000018038	Mrpl13	97	52.525	Cricetulus_griseus_crigri
FBgn0032720	mRpL13	99	46.328	ENSCSEG00000005024	mrpl13	99	46.328	Cynoglossus_semilaevis
FBgn0032720	mRpL13	99	45.198	ENSCVAG00000019608	mrpl13	99	45.198	Cyprinodon_variegatus
FBgn0032720	mRpL13	99	46.328	ENSDARG00000056903	mrpl13	99	46.328	Danio_rerio
FBgn0032720	mRpL13	99	47.159	ENSDNOG00000046226	MRPL13	99	47.159	Dasypus_novemcinctus
FBgn0032720	mRpL13	99	47.727	ENSDORG00000016654	Mrpl13	99	47.727	Dipodomys_ordii
FBgn0032720	mRpL13	99	32.386	ENSETEG00000017682	MRPL13	99	32.386	Echinops_telfairi
FBgn0032720	mRpL13	57	51.961	ENSEBUG00000007958	-	84	41.333	Eptatretus_burgeri
FBgn0032720	mRpL13	99	48.295	ENSECAG00000021161	MRPL13	99	48.295	Equus_caballus
FBgn0032720	mRpL13	99	42.373	ENSEEUG00000006391	MRPL13	100	42.373	Erinaceus_europaeus
FBgn0032720	mRpL13	99	49.153	ENSELUG00000023304	mrpl13	99	49.153	Esox_lucius
FBgn0032720	mRpL13	99	48.295	ENSFCAG00000001463	MRPL13	99	48.295	Felis_catus
FBgn0032720	mRpL13	85	50.993	ENSFALG00000002422	MRPL13	97	50.993	Ficedula_albicollis
FBgn0032720	mRpL13	99	47.727	ENSFDAG00000006554	MRPL13	99	47.727	Fukomys_damarensis
FBgn0032720	mRpL13	99	44.633	ENSFHEG00000001907	mrpl13	99	44.633	Fundulus_heteroclitus
FBgn0032720	mRpL13	76	47.059	ENSGMOG00000004838	mrpl13	99	47.059	Gadus_morhua
FBgn0032720	mRpL13	98	50.000	ENSGALG00000041863	MRPL13	97	50.000	Gallus_gallus
FBgn0032720	mRpL13	99	44.068	ENSGAFG00000002007	mrpl13	99	44.068	Gambusia_affinis
FBgn0032720	mRpL13	82	47.945	ENSGACG00000007061	mrpl13	100	47.945	Gasterosteus_aculeatus
FBgn0032720	mRpL13	98	49.425	ENSGAGG00000025331	-	97	49.425	Gopherus_agassizii
FBgn0032720	mRpL13	99	40.909	ENSGGOG00000024629	MRPL13	99	40.909	Gorilla_gorilla
FBgn0032720	mRpL13	99	44.633	ENSHBUG00000012259	mrpl13	99	44.633	Haplochromis_burtoni
FBgn0032720	mRpL13	99	47.727	ENSHGLG00000007021	MRPL13	99	47.727	Heterocephalus_glaber_female
FBgn0032720	mRpL13	99	47.727	ENSHGLG00100016348	MRPL13	99	47.727	Heterocephalus_glaber_male
FBgn0032720	mRpL13	98	44.253	ENSHCOG00000012037	mrpl13	97	44.253	Hippocampus_comes
FBgn0032720	mRpL13	99	46.893	ENSIPUG00000009071	mrpl13	99	46.893	Ictalurus_punctatus
FBgn0032720	mRpL13	98	49.425	ENSSTOG00000014264	MRPL13	98	49.425	Ictidomys_tridecemlineatus
FBgn0032720	mRpL13	99	48.295	ENSJJAG00000019308	Mrpl13	99	48.295	Jaculus_jaculus
FBgn0032720	mRpL13	99	46.893	ENSKMAG00000018091	mrpl13	99	46.893	Kryptolebias_marmoratus
FBgn0032720	mRpL13	99	46.328	ENSLBEG00000006340	mrpl13	99	46.328	Labrus_bergylta
FBgn0032720	mRpL13	94	49.701	ENSLACG00000015467	MRPL13	95	49.701	Latimeria_chalumnae
FBgn0032720	mRpL13	99	47.458	ENSLOCG00000009210	mrpl13	99	47.458	Lepisosteus_oculatus
FBgn0032720	mRpL13	95	46.154	ENSLAFG00000012985	MRPL13	95	46.154	Loxodonta_africana
FBgn0032720	mRpL13	99	47.159	ENSMFAG00000009755	MRPL13	99	47.159	Macaca_fascicularis
FBgn0032720	mRpL13	99	47.159	ENSMMUG00000002599	MRPL13	99	47.159	Macaca_mulatta
FBgn0032720	mRpL13	99	47.159	ENSMNEG00000034159	MRPL13	99	47.159	Macaca_nemestrina
FBgn0032720	mRpL13	99	47.159	ENSMLEG00000009613	MRPL13	99	47.159	Mandrillus_leucophaeus
FBgn0032720	mRpL13	99	46.893	ENSMAMG00000023991	mrpl13	99	46.893	Mastacembelus_armatus
FBgn0032720	mRpL13	99	44.633	ENSMZEG00005025500	mrpl13	99	44.633	Maylandia_zebra
FBgn0032720	mRpL13	53	48.421	ENSMAUG00000009122	-	97	48.421	Mesocricetus_auratus
FBgn0032720	mRpL13	99	45.198	ENSMAUG00000015546	-	99	45.198	Mesocricetus_auratus
FBgn0032720	mRpL13	99	47.727	ENSMICG00000014630	MRPL13	99	47.727	Microcebus_murinus
FBgn0032720	mRpL13	99	48.864	ENSMOCG00000018794	Mrpl13	99	48.864	Microtus_ochrogaster
FBgn0032720	mRpL13	99	46.328	ENSMMOG00000008934	mrpl13	99	46.328	Mola_mola
FBgn0032720	mRpL13	98	46.552	ENSMODG00000002300	MRPL13	98	46.552	Monodelphis_domestica
FBgn0032720	mRpL13	96	47.647	ENSMALG00000008122	mrpl13	98	47.647	Monopterus_albus
FBgn0032720	mRpL13	98	47.701	MGP_CAROLIEiJ_G0019799	Mrpl13	98	47.701	Mus_caroli
FBgn0032720	mRpL13	98	48.276	ENSMUSG00000022370	Mrpl13	98	48.276	Mus_musculus
FBgn0032720	mRpL13	98	48.276	MGP_PahariEiJ_G0019809	Mrpl13	98	48.276	Mus_pahari
FBgn0032720	mRpL13	98	48.276	MGP_SPRETEiJ_G0020696	Mrpl13	98	48.276	Mus_spretus
FBgn0032720	mRpL13	98	48.000	ENSMPUG00000001080	MRPL13	98	48.000	Mustela_putorius_furo
FBgn0032720	mRpL13	99	47.727	ENSMLUG00000009756	MRPL13	99	47.727	Myotis_lucifugus
FBgn0032720	mRpL13	99	49.432	ENSNGAG00000024334	Mrpl13	99	49.432	Nannospalax_galili
FBgn0032720	mRpL13	99	44.633	ENSNBRG00000021965	mrpl13	99	44.633	Neolamprologus_brichardi
FBgn0032720	mRpL13	99	47.159	ENSNLEG00000028268	MRPL13	99	47.159	Nomascus_leucogenys
FBgn0032720	mRpL13	98	49.425	ENSOPRG00000015721	MRPL13	99	49.425	Ochotona_princeps
FBgn0032720	mRpL13	99	47.159	ENSODEG00000001950	MRPL13	99	47.159	Octodon_degus
FBgn0032720	mRpL13	99	50.282	ENSOANG00000000414	MRPL13	99	50.282	Ornithorhynchus_anatinus
FBgn0032720	mRpL13	99	49.432	ENSOCUG00000016189	MRPL13	99	49.432	Oryctolagus_cuniculus
FBgn0032720	mRpL13	99	46.893	ENSORLG00000004647	mrpl13	99	46.893	Oryzias_latipes
FBgn0032720	mRpL13	99	46.893	ENSORLG00020022623	mrpl13	99	46.893	Oryzias_latipes_hni
FBgn0032720	mRpL13	99	46.893	ENSORLG00015008036	mrpl13	83	46.893	Oryzias_latipes_hsok
FBgn0032720	mRpL13	99	46.328	ENSOMEG00000011732	mrpl13	99	46.328	Oryzias_melastigma
FBgn0032720	mRpL13	99	46.893	ENSOGAG00000014284	MRPL13	99	46.893	Otolemur_garnettii
FBgn0032720	mRpL13	99	49.432	ENSOARG00000019181	-	99	49.432	Ovis_aries
FBgn0032720	mRpL13	94	48.503	ENSOARG00000017405	-	84	48.503	Ovis_aries
FBgn0032720	mRpL13	99	47.159	ENSPPAG00000043579	MRPL13	99	47.159	Pan_paniscus
FBgn0032720	mRpL13	99	48.295	ENSPPRG00000024807	MRPL13	99	48.295	Panthera_pardus
FBgn0032720	mRpL13	99	48.295	ENSPTIG00000021819	MRPL13	99	48.295	Panthera_tigris_altaica
FBgn0032720	mRpL13	99	47.159	ENSPTRG00000020541	MRPL13	99	47.159	Pan_troglodytes
FBgn0032720	mRpL13	99	47.159	ENSPANG00000001115	MRPL13	99	47.159	Papio_anubis
FBgn0032720	mRpL13	99	47.458	ENSPKIG00000018874	mrpl13	99	47.458	Paramormyrops_kingsleyae
FBgn0032720	mRpL13	94	49.701	ENSPSIG00000008016	MRPL13	98	49.701	Pelodiscus_sinensis
FBgn0032720	mRpL13	99	47.458	ENSPMGG00000022710	mrpl13	99	47.458	Periophthalmus_magnuspinnatus
FBgn0032720	mRpL13	99	48.864	ENSPEMG00000016375	Mrpl13	99	48.864	Peromyscus_maniculatus_bairdii
FBgn0032720	mRpL13	99	46.893	ENSPMAG00000007735	-	99	46.893	Petromyzon_marinus
FBgn0032720	mRpL13	98	47.701	ENSPCIG00000019489	MRPL13	98	47.701	Phascolarctos_cinereus
FBgn0032720	mRpL13	99	44.633	ENSPFOG00000010630	mrpl13	99	44.633	Poecilia_formosa
FBgn0032720	mRpL13	99	44.633	ENSPLAG00000013671	mrpl13	99	44.633	Poecilia_latipinna
FBgn0032720	mRpL13	99	44.633	ENSPMEG00000002019	mrpl13	99	44.633	Poecilia_mexicana
FBgn0032720	mRpL13	99	44.633	ENSPREG00000009510	mrpl13	99	44.633	Poecilia_reticulata
FBgn0032720	mRpL13	58	41.748	ENSPPYG00000018847	-	87	41.748	Pongo_abelii
FBgn0032720	mRpL13	99	48.295	ENSPCAG00000001541	MRPL13	99	48.295	Procavia_capensis
FBgn0032720	mRpL13	72	50.388	ENSPCOG00000016230	MRPL13	90	50.388	Propithecus_coquereli
FBgn0032720	mRpL13	99	43.182	ENSPVAG00000003719	MRPL13	99	43.182	Pteropus_vampyrus
FBgn0032720	mRpL13	99	44.633	ENSPNYG00000004669	mrpl13	99	44.633	Pundamilia_nyererei
FBgn0032720	mRpL13	99	45.763	ENSPNAG00000009319	mrpl13	99	45.763	Pygocentrus_nattereri
FBgn0032720	mRpL13	98	48.851	ENSRNOG00000004401	Mrpl13	98	48.851	Rattus_norvegicus
FBgn0032720	mRpL13	94	40.237	ENSRBIG00000035341	MRPL13	94	40.237	Rhinopithecus_bieti
FBgn0032720	mRpL13	99	46.591	ENSRROG00000044613	MRPL13	99	46.591	Rhinopithecus_roxellana
FBgn0032720	mRpL13	99	47.727	ENSSBOG00000003037	MRPL13	99	47.727	Saimiri_boliviensis_boliviensis
FBgn0032720	mRpL13	99	47.458	ENSSFOG00015005149	mrpl13	99	47.458	Scleropages_formosus
FBgn0032720	mRpL13	99	49.153	ENSSMAG00000002558	mrpl13	99	49.153	Scophthalmus_maximus
FBgn0032720	mRpL13	99	46.328	ENSSDUG00000016507	mrpl13	99	46.328	Seriola_dumerili
FBgn0032720	mRpL13	99	46.328	ENSSLDG00000022405	mrpl13	99	46.328	Seriola_lalandi_dorsalis
FBgn0032720	mRpL13	66	50.847	ENSSARG00000014236	MRPL13	98	50.847	Sorex_araneus
FBgn0032720	mRpL13	99	49.153	ENSSPUG00000008445	MRPL13	99	49.153	Sphenodon_punctatus
FBgn0032720	mRpL13	99	46.328	ENSSPAG00000013067	mrpl13	99	46.328	Stegastes_partitus
FBgn0032720	mRpL13	99	48.864	ENSSSCG00000005996	MRPL13	89	48.864	Sus_scrofa
FBgn0032720	mRpL13	99	45.198	ENSTRUG00000023240	mrpl13	99	45.198	Takifugu_rubripes
FBgn0032720	mRpL13	94	38.095	ENSTNIG00000009643	mrpl13	94	38.095	Tetraodon_nigroviridis
FBgn0032720	mRpL13	95	39.645	ENSTBEG00000004571	MRPL13	100	39.645	Tupaia_belangeri
FBgn0032720	mRpL13	99	48.864	ENSTTRG00000005939	MRPL13	99	48.864	Tursiops_truncatus
FBgn0032720	mRpL13	94	42.515	ENSUAMG00000009636	MRPL13	97	42.515	Ursus_americanus
FBgn0032720	mRpL13	99	48.864	ENSUMAG00000021939	MRPL13	99	48.864	Ursus_maritimus
FBgn0032720	mRpL13	99	42.614	ENSVPAG00000000774	MRPL13	99	42.614	Vicugna_pacos
FBgn0032720	mRpL13	93	43.030	ENSVVUG00000016056	MRPL13	96	43.030	Vulpes_vulpes
FBgn0032720	mRpL13	74	51.145	ENSXETG00000025658	mrpl13	94	49.593	Xenopus_tropicalis
FBgn0032720	mRpL13	99	44.068	ENSXCOG00000016141	mrpl13	99	44.068	Xiphophorus_couchianus
FBgn0032720	mRpL13	99	44.068	ENSXMAG00000010846	mrpl13	99	44.068	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003729	mRNA binding	21873635.	IBA	Function
GO:0003735	structural constituent of ribosome	21873635.	IBA	Function
GO:0003735	structural constituent of ribosome	11279069.	ISS	Function
GO:0003735	structural constituent of ribosome	17927810.	TAS	Function
GO:0005739	mitochondrion	25294944.	HDA	Component
GO:0005762	mitochondrial large ribosomal subunit	21873635.	IBA	Component
GO:0005762	mitochondrial large ribosomal subunit	11279069.	ISS	Component
GO:0005762	mitochondrial large ribosomal subunit	17927810.	TAS	Component
GO:0005840	ribosome	21873635.	IBA	Component
GO:0006412	translation	11279069.	ISS	Process
GO:0017148	negative regulation of translation	21873635.	IBA	Process
GO:0032543	mitochondrial translation	17927810.	TAS	Process