EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0032822 (Gene tree)
Gene ID: 35268
Gene Symbol: CG10466
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Plus strand
Length: 679 bases
Position: chr2L:19792104-19792782
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0080829	RRM_1	PF00076.22	2.9e-20	1	1
FBpp0304487	RRM_1	PF00076.22	2.9e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0332178	-	621	-	FBpp0304487	154 (aa)	-	Q9VIS0
FBtr0081291	-	538	-	FBpp0080829	154 (aa)	-	Q9VIS0

Gene Model

Click here to download FBgn0032822's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0032822's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
FBgn0032822	CG10466	89	32.927	FBgn0010263	Rbp9	51	34.375
FBgn0032822	CG10466	77	31.746	FBgn0264270	Sxl	55	31.746

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0032822	CG10466	89	65.468	ENSG00000134597	RBMX2	100	62.069	Homo_sapiens
FBgn0032822	CG10466	89	70.000	ENSAPOG00000018578	rbmx2	51	70.000	Acanthochromis_polyacanthus
FBgn0032822	CG10466	64	72.727	ENSAPLG00000010127	RBMX2	82	72.727	Anas_platyrhynchos
FBgn0032822	CG10466	88	65.693	ENSCHIG00000000167	-	56	59.494	Capra_hircus
FBgn0032822	CG10466	88	64.234	ENSCHIG00000024429	-	53	57.862	Capra_hircus
FBgn0032822	CG10466	88	66.423	ENSCHIG00000015832	-	55	59.748	Capra_hircus
FBgn0032822	CG10466	91	66.434	ENSTSYG00000010611	RBMX2	54	65.493	Carlito_syrichta
FBgn0032822	CG10466	91	64.138	ENSCCAG00000024017	-	56	59.748	Cebus_capucinus
FBgn0032822	CG10466	88	64.234	ENSCCAG00000033009	-	57	58.491	Cebus_capucinus
FBgn0032822	CG10466	82	57.031	ENSCATG00000033320	-	58	50.641	Cercocebus_atys
FBgn0032822	CG10466	89	66.187	ENSCATG00000005967	RBMX2	55	60.256	Cercocebus_atys
FBgn0032822	CG10466	88	63.830	ENSCSAG00000007947	RBMX2	50	59.006	Chlorocebus_sabaeus
FBgn0032822	CG10466	65	67.647	ENSEBUG00000014856	RBMX2	53	53.741	Eptatretus_burgeri
FBgn0032822	CG10466	91	66.901	ENSGMOG00000000253	rbmx2	65	66.901	Gadus_morhua
FBgn0032822	CG10466	89	66.187	ENSGACG00000001855	rbmx2	64	66.187	Gasterosteus_aculeatus
FBgn0032822	CG10466	88	64.964	ENSGGOG00000026106	-	54	60.256	Gorilla_gorilla
FBgn0032822	CG10466	100	61.006	ENSHGLG00000008080	RBMX2	59	61.006	Heterocephalus_glaber_female
FBgn0032822	CG10466	88	67.391	ENSHCOG00000011875	rbmx2	52	67.391	Hippocampus_comes
FBgn0032822	CG10466	89	66.187	ENSMFAG00000041017	RBMX2	54	60.667	Macaca_fascicularis
FBgn0032822	CG10466	89	66.187	ENSMMUG00000008389	RBMX2	58	61.006	Macaca_mulatta
FBgn0032822	CG10466	89	66.187	ENSMNEG00000030574	RBMX2	56	60.256	Macaca_nemestrina
FBgn0032822	CG10466	63	73.196	ENSMGAG00000001801	RBMX2	78	73.196	Meleagris_gallopavo
FBgn0032822	CG10466	88	67.883	ENSMAUG00000019202	Rbmx2	50	60.606	Mesocricetus_auratus
FBgn0032822	CG10466	88	62.319	ENSMODG00000012002	-	54	61.268	Monodelphis_domestica
FBgn0032822	CG10466	100	51.282	ENSMODG00000011981	-	96	51.282	Monodelphis_domestica
FBgn0032822	CG10466	91	60.839	ENSMLUG00000023163	-	82	60.839	Myotis_lucifugus
FBgn0032822	CG10466	89	63.768	ENSOCUG00000020937	-	79	63.768	Oryctolagus_cuniculus
FBgn0032822	CG10466	65	57.724	ENSOMEG00000013873	RBMX2	91	57.724	Oryzias_melastigma
FBgn0032822	CG10466	88	67.153	ENSOARG00000017320	-	51	60.377	Ovis_aries
FBgn0032822	CG10466	89	64.748	ENSPPAG00000027227	-	52	60.897	Pan_paniscus
FBgn0032822	CG10466	89	66.187	ENSPPAG00000042194	RBMX2	50	61.006	Pan_paniscus
FBgn0032822	CG10466	65	53.435	ENSPKIG00000008614	-	92	53.435	Paramormyrops_kingsleyae
FBgn0032822	CG10466	91	61.972	ENSPCIG00000013378	-	92	61.972	Phascolarctos_cinereus
FBgn0032822	CG10466	91	64.828	ENSPCOG00000026182	RBMX2	59	59.494	Propithecus_coquereli
FBgn0032822	CG10466	95	42.282	YIR005W	IST3	100	42.282	Saccharomyces_cerevisiae
FBgn0032822	CG10466	59	74.725	ENSTGUG00000005239	RBMX2	77	74.725	Taeniopygia_guttata
FBgn0032822	CG10466	88	67.883	ENSTNIG00000007672	rbmx2	87	67.883	Tetraodon_nigroviridis
FBgn0032822	CG10466	88	61.594	ENSXETG00000009623	rbmx2	51	61.594	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000384	first spliceosomal transesterification activity	21873635.	IBA	Function
GO:0000398	mRNA splicing, via spliceosome	21873635.	IBA	Process
GO:0000398	mRNA splicing, via spliceosome	18981222.	IC	Process
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003729	mRNA binding	10908586.	ISS	Function
GO:0005686	U2 snRNP	21873635.	IBA	Component
GO:0071011	precatalytic spliceosome	18981222.	HDA	Component
GO:0071013	catalytic step 2 spliceosome	18981222.	HDA	Component