EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0033060 (Gene tree)
Gene ID: 35537
Gene Symbol: CG7849
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Plus strand
Length: 1179 bases
Position: chr2R:6076910-6078088
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0085330	TruB_N	PF01509.18	5.9e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0085977	-	1075	-	FBpp0085330	317 (aa)	-	Q29QN4

Gene Model

Click here to download FBgn0033060's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0033060's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0033060	CG7849	88	33.096	ENSG00000167112	TRUB2	83	33.096	Homo_sapiens
FBgn0033060	CG7849	66	34.762	ENSAPOG00000015733	trub2	75	34.762	Acanthochromis_polyacanthus
FBgn0033060	CG7849	85	36.029	ENSAMEG00000015395	TRUB2	81	36.029	Ailuropoda_melanoleuca
FBgn0033060	CG7849	87	33.571	ENSACIG00000016500	trub2	83	33.571	Amphilophus_citrinellus
FBgn0033060	CG7849	90	33.448	ENSAOCG00000002330	trub2	84	33.448	Amphiprion_ocellaris
FBgn0033060	CG7849	90	33.449	ENSAPEG00000013177	trub2	84	33.449	Amphiprion_percula
FBgn0033060	CG7849	92	33.670	ENSATEG00000011371	trub2	92	33.670	Anabas_testudineus
FBgn0033060	CG7849	89	31.317	ENSACAG00000007331	TRUB2	85	31.317	Anolis_carolinensis
FBgn0033060	CG7849	85	33.456	ENSANAG00000036234	TRUB2	86	33.456	Aotus_nancymaae
FBgn0033060	CG7849	90	31.186	ENSACLG00000010793	trub2	86	31.186	Astatotilapia_calliptera
FBgn0033060	CG7849	92	33.898	ENSAMXG00000031679	trub2	83	33.898	Astyanax_mexicanus
FBgn0033060	CG7849	85	32.967	ENSCJAG00000020009	TRUB2	81	32.967	Callithrix_jacchus
FBgn0033060	CG7849	97	32.573	ENSCAFG00000020068	TRUB2	91	32.573	Canis_familiaris
FBgn0033060	CG7849	86	33.091	ENSCHIG00000021160	TRUB2	82	33.091	Capra_hircus
FBgn0033060	CG7849	85	34.191	ENSTSYG00000034163	TRUB2	81	34.191	Carlito_syrichta
FBgn0033060	CG7849	74	33.047	ENSCAPG00000000223	TRUB2	76	33.047	Cavia_aperea
FBgn0033060	CG7849	94	32.226	ENSCPOG00000013535	TRUB2	87	32.226	Cavia_porcellus
FBgn0033060	CG7849	85	33.088	ENSCCAG00000028463	-	81	33.088	Cebus_capucinus
FBgn0033060	CG7849	85	33.824	ENSCCAG00000026531	-	82	33.824	Cebus_capucinus
FBgn0033060	CG7849	88	34.286	ENSCATG00000038234	TRUB2	83	34.286	Cercocebus_atys
FBgn0033060	CG7849	85	31.852	ENSCLAG00000001702	TRUB2	82	31.852	Chinchilla_lanigera
FBgn0033060	CG7849	91	33.788	ENSCSAG00000014117	TRUB2	85	33.788	Chlorocebus_sabaeus
FBgn0033060	CG7849	85	34.926	ENSCHOG00000001555	TRUB2	81	34.926	Choloepus_hoffmanni
FBgn0033060	CG7849	95	32.143	ENSCSAVG00000003930	-	93	32.143	Ciona_savignyi
FBgn0033060	CG7849	90	31.944	ENSCANG00000016135	TRUB2	82	31.944	Colobus_angolensis_palliatus
FBgn0033060	CG7849	85	32.721	ENSCGRG00001024441	Trub2	81	32.721	Cricetulus_griseus_chok1gshd
FBgn0033060	CG7849	85	32.721	ENSCGRG00000005633	Trub2	81	32.721	Cricetulus_griseus_crigri
FBgn0033060	CG7849	87	32.753	ENSCSEG00000001331	trub2	82	32.753	Cynoglossus_semilaevis
FBgn0033060	CG7849	91	32.646	ENSCVAG00000009901	trub2	86	32.646	Cyprinodon_variegatus
FBgn0033060	CG7849	92	35.034	ENSDARG00000028379	trub2	83	35.034	Danio_rerio
FBgn0033060	CG7849	85	33.574	ENSDNOG00000045679	-	81	33.574	Dasypus_novemcinctus
FBgn0033060	CG7849	94	33.444	ENSDORG00000016222	Trub2	88	33.444	Dipodomys_ordii
FBgn0033060	CG7849	90	31.359	ENSETEG00000009114	TRUB2	88	31.359	Echinops_telfairi
FBgn0033060	CG7849	92	36.364	ENSEBUG00000015723	trub2	84	36.364	Eptatretus_burgeri
FBgn0033060	CG7849	85	35.662	ENSEASG00005016819	TRUB2	81	35.662	Equus_asinus_asinus
FBgn0033060	CG7849	85	35.662	ENSECAG00000023520	TRUB2	81	35.662	Equus_caballus
FBgn0033060	CG7849	86	31.868	ENSEEUG00000008908	TRUB2	82	31.868	Erinaceus_europaeus
FBgn0033060	CG7849	90	32.333	ENSELUG00000002376	trub2	93	32.333	Esox_lucius
FBgn0033060	CG7849	85	34.191	ENSFCAG00000005839	TRUB2	83	34.191	Felis_catus
FBgn0033060	CG7849	65	32.367	ENSFALG00000001364	TRUB2	66	32.367	Ficedula_albicollis
FBgn0033060	CG7849	86	35.145	ENSFDAG00000021374	TRUB2	82	35.145	Fukomys_damarensis
FBgn0033060	CG7849	91	30.822	ENSFHEG00000014655	trub2	85	30.822	Fundulus_heteroclitus
FBgn0033060	CG7849	85	30.627	ENSGMOG00000000981	trub2	89	30.627	Gadus_morhua
FBgn0033060	CG7849	86	31.618	ENSGALG00000004920	TRUB2	66	31.618	Gallus_gallus
FBgn0033060	CG7849	90	32.180	ENSGAFG00000010107	trub2	85	32.069	Gambusia_affinis
FBgn0033060	CG7849	90	32.056	ENSGACG00000001476	trub2	86	32.056	Gasterosteus_aculeatus
FBgn0033060	CG7849	88	33.452	ENSGGOG00000014780	TRUB2	83	33.452	Gorilla_gorilla
FBgn0033060	CG7849	90	31.186	ENSHBUG00000022384	trub2	86	31.186	Haplochromis_burtoni
FBgn0033060	CG7849	85	34.066	ENSHGLG00000016715	TRUB2	81	34.066	Heterocephalus_glaber_female
FBgn0033060	CG7849	85	34.066	ENSHGLG00100016548	TRUB2	81	34.066	Heterocephalus_glaber_male
FBgn0033060	CG7849	90	32.168	ENSHCOG00000017748	trub2	87	32.168	Hippocampus_comes
FBgn0033060	CG7849	92	35.034	ENSIPUG00000017725	hdhd3	51	35.034	Ictalurus_punctatus
FBgn0033060	CG7849	86	35.273	ENSSTOG00000022617	-	83	35.273	Ictidomys_tridecemlineatus
FBgn0033060	CG7849	91	34.589	ENSSTOG00000008024	-	85	34.589	Ictidomys_tridecemlineatus
FBgn0033060	CG7849	95	30.795	ENSJJAG00000019181	Trub2	87	30.795	Jaculus_jaculus
FBgn0033060	CG7849	96	31.596	ENSKMAG00000007861	trub2	91	31.596	Kryptolebias_marmoratus
FBgn0033060	CG7849	97	31.922	ENSLBEG00000000907	trub2	89	31.922	Labrus_bergylta
FBgn0033060	CG7849	93	31.419	ENSLACG00000001515	TRUB2	87	31.419	Latimeria_chalumnae
FBgn0033060	CG7849	92	34.576	ENSLOCG00000000885	trub2	96	34.576	Lepisosteus_oculatus
FBgn0033060	CG7849	85	33.456	ENSLAFG00000002174	TRUB2	88	33.456	Loxodonta_africana
FBgn0033060	CG7849	88	34.164	ENSMFAG00000000881	TRUB2	83	34.164	Macaca_fascicularis
FBgn0033060	CG7849	88	34.164	ENSMMUG00000014146	TRUB2	83	34.164	Macaca_mulatta
FBgn0033060	CG7849	88	34.164	ENSMNEG00000011189	TRUB2	83	34.164	Macaca_nemestrina
FBgn0033060	CG7849	88	33.571	ENSMLEG00000037270	TRUB2	83	33.571	Mandrillus_leucophaeus
FBgn0033060	CG7849	87	35.740	ENSMAMG00000023643	trub2	91	35.740	Mastacembelus_armatus
FBgn0033060	CG7849	90	30.847	ENSMZEG00005016018	trub2	86	30.847	Maylandia_zebra
FBgn0033060	CG7849	56	33.708	ENSMGAG00000003894	TRUB2	89	33.708	Meleagris_gallopavo
FBgn0033060	CG7849	85	33.456	ENSMAUG00000010403	Trub2	81	33.456	Mesocricetus_auratus
FBgn0033060	CG7849	87	34.296	ENSMICG00000047032	TRUB2	82	34.296	Microcebus_murinus
FBgn0033060	CG7849	94	33.113	ENSMOCG00000014291	Trub2	96	33.113	Microtus_ochrogaster
FBgn0033060	CG7849	94	33.987	ENSMMOG00000021674	trub2	92	33.987	Mola_mola
FBgn0033060	CG7849	91	31.724	ENSMODG00000005940	TRUB2	96	31.724	Monodelphis_domestica
FBgn0033060	CG7849	87	34.767	ENSMALG00000021231	trub2	82	34.767	Monopterus_albus
FBgn0033060	CG7849	87	32.975	MGP_CAROLIEiJ_G0023368	Trub2	83	32.975	Mus_caroli
FBgn0033060	CG7849	85	33.824	ENSMUSG00000039826	Trub2	81	33.824	Mus_musculus
FBgn0033060	CG7849	91	32.013	MGP_PahariEiJ_G0024826	Trub2	90	32.013	Mus_pahari
FBgn0033060	CG7849	85	33.824	MGP_SPRETEiJ_G0024286	Trub2	81	33.824	Mus_spretus
FBgn0033060	CG7849	85	34.420	ENSMPUG00000013206	TRUB2	73	34.420	Mustela_putorius_furo
FBgn0033060	CG7849	87	32.975	ENSMLUG00000005256	TRUB2	83	32.975	Myotis_lucifugus
FBgn0033060	CG7849	85	32.353	ENSNGAG00000018679	Trub2	81	32.353	Nannospalax_galili
FBgn0033060	CG7849	90	32.168	ENSNBRG00000016294	trub2	86	32.168	Neolamprologus_brichardi
FBgn0033060	CG7849	88	33.452	ENSNLEG00000017556	TRUB2	83	33.452	Nomascus_leucogenys
FBgn0033060	CG7849	94	33.223	ENSMEUG00000000484	TRUB2	95	33.223	Notamacropus_eugenii
FBgn0033060	CG7849	86	30.797	ENSOPRG00000001981	TRUB2	82	30.797	Ochotona_princeps
FBgn0033060	CG7849	88	31.295	ENSODEG00000017292	TRUB2	85	31.295	Octodon_degus
FBgn0033060	CG7849	90	31.186	ENSONIG00000004230	trub2	86	31.186	Oreochromis_niloticus
FBgn0033060	CG7849	85	33.704	ENSOCUG00000026296	TRUB2	80	32.667	Oryctolagus_cuniculus
FBgn0033060	CG7849	93	31.757	ENSORLG00000020011	trub2	89	31.757	Oryzias_latipes
FBgn0033060	CG7849	89	32.042	ENSORLG00020011028	trub2	82	32.042	Oryzias_latipes_hni
FBgn0033060	CG7849	90	32.168	ENSORLG00015007494	trub2	86	32.168	Oryzias_latipes_hsok
FBgn0033060	CG7849	94	34.219	ENSOMEG00000006702	trub2	90	34.219	Oryzias_melastigma
FBgn0033060	CG7849	58	36.612	ENSOARG00000003785	-	73	36.612	Ovis_aries
FBgn0033060	CG7849	88	31.786	ENSOARG00000010579	-	84	31.786	Ovis_aries
FBgn0033060	CG7849	88	33.452	ENSPPAG00000043146	TRUB2	83	33.452	Pan_paniscus
FBgn0033060	CG7849	85	34.191	ENSPPRG00000006307	TRUB2	83	34.191	Panthera_pardus
FBgn0033060	CG7849	85	34.191	ENSPTIG00000012366	TRUB2	83	34.191	Panthera_tigris_altaica
FBgn0033060	CG7849	88	33.452	ENSPTRG00000052151	-	83	33.452	Pan_troglodytes
FBgn0033060	CG7849	88	33.452	ENSPTRG00000021423	TRUB2	83	33.452	Pan_troglodytes
FBgn0033060	CG7849	88	34.164	ENSPANG00000025856	TRUB2	83	34.164	Papio_anubis
FBgn0033060	CG7849	95	32.237	ENSPKIG00000019769	trub2	98	32.237	Paramormyrops_kingsleyae
FBgn0033060	CG7849	90	31.834	ENSPMGG00000010206	trub2	90	31.834	Periophthalmus_magnuspinnatus
FBgn0033060	CG7849	94	32.558	ENSPEMG00000017893	Trub2	88	32.558	Peromyscus_maniculatus_bairdii
FBgn0033060	CG7849	88	34.397	ENSPCIG00000026731	TRUB2	89	34.397	Phascolarctos_cinereus
FBgn0033060	CG7849	88	32.155	ENSPFOG00000018018	trub2	73	32.155	Poecilia_formosa
FBgn0033060	CG7849	88	32.155	ENSPLAG00000010484	trub2	80	32.155	Poecilia_latipinna
FBgn0033060	CG7849	90	32.069	ENSPMEG00000012913	trub2	85	32.069	Poecilia_mexicana
FBgn0033060	CG7849	90	31.834	ENSPREG00000002549	trub2	84	31.724	Poecilia_reticulata
FBgn0033060	CG7849	91	34.130	ENSPPYG00000019650	TRUB2	87	34.130	Pongo_abelii
FBgn0033060	CG7849	85	33.456	ENSPCAG00000015068	TRUB2	82	33.456	Procavia_capensis
FBgn0033060	CG7849	94	33.000	ENSPCOG00000017100	TRUB2	89	33.000	Propithecus_coquereli
FBgn0033060	CG7849	80	33.984	ENSPVAG00000001224	TRUB2	85	33.984	Pteropus_vampyrus
FBgn0033060	CG7849	90	30.847	ENSPNYG00000013666	trub2	86	30.847	Pundamilia_nyererei
FBgn0033060	CG7849	92	34.014	ENSPNAG00000017292	trub2	83	34.014	Pygocentrus_nattereri
FBgn0033060	CG7849	92	32.237	ENSRNOG00000043189	Trub2	93	32.237	Rattus_norvegicus
FBgn0033060	CG7849	91	32.192	ENSRBIG00000006965	TRUB2	84	32.192	Rhinopithecus_bieti
FBgn0033060	CG7849	91	33.904	ENSRROG00000042928	TRUB2	85	33.904	Rhinopithecus_roxellana
FBgn0033060	CG7849	85	33.456	ENSSBOG00000022439	TRUB2	81	33.456	Saimiri_boliviensis_boliviensis
FBgn0033060	CG7849	89	34.397	ENSSFOG00015013391	trub2	90	34.397	Scleropages_formosus
FBgn0033060	CG7849	90	33.564	ENSSMAG00000020820	trub2	87	33.564	Scophthalmus_maximus
FBgn0033060	CG7849	91	33.677	ENSSDUG00000016928	trub2	86	33.677	Seriola_dumerili
FBgn0033060	CG7849	91	34.021	ENSSLDG00000024701	trub2	88	33.333	Seriola_lalandi_dorsalis
FBgn0033060	CG7849	91	30.208	ENSSPUG00000015515	TRUB2	85	30.208	Sphenodon_punctatus
FBgn0033060	CG7849	90	34.483	ENSSPAG00000017865	trub2	86	34.483	Stegastes_partitus
FBgn0033060	CG7849	85	32.721	ENSSSCG00000005645	TRUB2	77	32.721	Sus_scrofa
FBgn0033060	CG7849	67	33.962	ENSTGUG00000003704	TRUB2	80	33.962	Taeniopygia_guttata
FBgn0033060	CG7849	90	31.379	ENSTRUG00000015499	trub2	87	31.379	Takifugu_rubripes
FBgn0033060	CG7849	90	32.069	ENSTNIG00000014721	trub2	98	32.069	Tetraodon_nigroviridis
FBgn0033060	CG7849	55	36.994	ENSTBEG00000000586	TRUB2	77	36.994	Tupaia_belangeri
FBgn0033060	CG7849	86	32.000	ENSTTRG00000016486	TRUB2	82	32.000	Tursiops_truncatus
FBgn0033060	CG7849	85	35.294	ENSUAMG00000020276	TRUB2	79	35.294	Ursus_americanus
FBgn0033060	CG7849	85	35.294	ENSUMAG00000022051	TRUB2	79	35.294	Ursus_maritimus
FBgn0033060	CG7849	94	33.333	ENSVVUG00000013451	TRUB2	83	33.333	Vulpes_vulpes
FBgn0033060	CG7849	91	34.021	ENSXETG00000003973	trub2	88	34.021	Xenopus_tropicalis
FBgn0033060	CG7849	91	31.849	ENSXCOG00000008759	trub2	85	31.849	Xiphophorus_couchianus
FBgn0033060	CG7849	91	32.534	ENSXMAG00000015478	trub2	85	32.534	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001522	pseudouridine synthesis	-	IEA	Process
GO:0003723	RNA binding	-	IEA	Function
GO:0006396	RNA processing	-	IEA	Process
GO:0009982	pseudouridine synthase activity	-	IEA	Function