EuRBPDB

Description

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0033264 (Gene tree)
Gene ID: 35784
Gene Symbol: Nup50
Alias: -
Full Name: Nucleoporin 50kD
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Plus strand
Length: 2023
Position: chr2R: 8123036-8125058
Accession: FBgn0033264
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27378189	Global changes of the RNA bound proteome during the maternal-to-zygotic transition in Drosophila	IC & embryos.MZT	2016 Jul 5	Sysoev VO	DOI: 10.1038/ncomms12128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0088783	-	1907	-	FBpp0087861	564 (aa)	-	Q7K0D8

Gene Model

Click here to download FBgn0033264's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0033264's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0033264	Nup50	66	55.814	ENSMUSG00000016619	Nup50	72	54.839	Mus_musculus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000785	chromatin	20144760.	IMP	Component
GO:0005096	GTPase activator activity	21873635.	IBA	Function
GO:0005515	protein binding	17431409.	IPI	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005643	nuclear pore	21873635.	IBA	Component
GO:0005704	polytene chromosome band	20144760.	IDA	Component
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0006606	protein import into nucleus	21873635.	IBA	Process
GO:0006606	protein import into nucleus	20547758.	IMP	Process
GO:0008536	Ran GTPase binding	21873635.	IBA	Function
GO:0031490	chromatin DNA binding	20144760.	IMP	Function
GO:0035080	heat shock-mediated polytene chromosome puffing	20144760.	IDA	Process
GO:0045944	positive regulation of transcription by RNA polymerase II	20144760.	IMP	Process