EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0033352 (Gene tree)
Gene ID: 35893
Gene Symbol: PAN2
Alias: -
Full Name: Poly(A)-binding protein-dependent poly(A) ribonuclease 2
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: confidence
Strand: Plus strand
Length: 4935 bases
Position: chr2R:8928169-8933103
Accession: FBgn0033352
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0087735	RNase_T	PF00929.24	4.1e-22	1	1
FBpp0308411	RNase_T	PF00929.24	4.2e-22	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27378189	Global changes of the RNA bound proteome during the maternal-to-zygotic transition in Drosophila	IC & embryos.MZT	2016 Jul 5	Sysoev VO	DOI: 10.1038/ncomms12128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0339303	-	4048	-	FBpp0308411	1240 (aa)	-	A0A0B4LEY4
FBtr0088654	-	4051	-	FBpp0087735	1241 (aa)	-	A1Z7K9

Gene Model

Click here to download FBgn0033352's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0033352's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0033352	PAN2	98	40.331	ENSAPOG00000022955	pan2	98	40.776	Acanthochromis_polyacanthus
FBgn0033352	PAN2	96	41.489	ENSAMEG00000003824	PAN2	93	41.489	Ailuropoda_melanoleuca
FBgn0033352	PAN2	89	51.801	ENSACIG00000013079	pan2	97	40.895	Amphilophus_citrinellus
FBgn0033352	PAN2	96	37.169	ENSACIG00000012858	PAN2	95	37.126	Amphilophus_citrinellus
FBgn0033352	PAN2	98	40.456	ENSAOCG00000022334	pan2	98	40.898	Amphiprion_ocellaris
FBgn0033352	PAN2	99	40.534	ENSAPEG00000022760	pan2	98	40.977	Amphiprion_percula
FBgn0033352	PAN2	96	41.311	ENSATEG00000024030	pan2	94	41.776	Anabas_testudineus
FBgn0033352	PAN2	94	40.340	ENSAPLG00000005195	PAN2	97	40.986	Anas_platyrhynchos
FBgn0033352	PAN2	96	43.424	ENSACAG00000007067	PAN2	94	43.342	Anolis_carolinensis
FBgn0033352	PAN2	96	41.017	ENSANAG00000036468	PAN2	93	41.017	Aotus_nancymaae
FBgn0033352	PAN2	95	37.951	ENSACLG00000023821	pan2	93	38.119	Astatotilapia_calliptera
FBgn0033352	PAN2	99	41.417	ENSACLG00000023674	pan2	98	41.575	Astatotilapia_calliptera
FBgn0033352	PAN2	96	41.201	ENSAMXG00000005418	pan2	92	41.749	Astyanax_mexicanus
FBgn0033352	PAN2	96	41.181	ENSBTAG00000004376	PAN2	93	41.181	Bos_taurus
FBgn0033352	PAN2	96	40.950	ENSCJAG00000011141	PAN2	93	40.950	Callithrix_jacchus
FBgn0033352	PAN2	96	41.311	ENSCAFG00000000119	PAN2	93	41.311	Canis_familiaris
FBgn0033352	PAN2	96	41.803	ENSCAFG00020024865	PAN2	93	41.402	Canis_lupus_dingo
FBgn0033352	PAN2	96	41.152	ENSCHIG00000026935	PAN2	94	41.152	Capra_hircus
FBgn0033352	PAN2	96	41.278	ENSTSYG00000006927	PAN2	93	41.278	Carlito_syrichta
FBgn0033352	PAN2	96	42.023	ENSCPOG00000014918	PAN2	93	42.023	Cavia_porcellus
FBgn0033352	PAN2	96	40.950	ENSCCAG00000036637	PAN2	93	40.950	Cebus_capucinus
FBgn0033352	PAN2	96	41.441	ENSCATG00000045076	PAN2	93	41.399	Cercocebus_atys
FBgn0033352	PAN2	96	42.260	ENSCLAG00000011700	PAN2	93	42.260	Chinchilla_lanigera
FBgn0033352	PAN2	96	41.196	ENSCSAG00000005173	PAN2	93	41.196	Chlorocebus_sabaeus
FBgn0033352	PAN2	96	42.669	ENSCPBG00000014029	PAN2	95	42.440	Chrysemys_picta_bellii
FBgn0033352	PAN2	94	39.916	ENSCSAVG00000003833	-	97	50.975	Ciona_savignyi
FBgn0033352	PAN2	96	41.066	ENSCANG00000017798	PAN2	93	40.850	Colobus_angolensis_palliatus
FBgn0033352	PAN2	96	41.536	ENSCGRG00001019707	Pan2	93	41.536	Cricetulus_griseus_chok1gshd
FBgn0033352	PAN2	96	41.467	ENSCGRG00000009996	Pan2	93	41.467	Cricetulus_griseus_crigri
FBgn0033352	PAN2	98	39.019	ENSCSEG00000021529	pan2	96	39.469	Cynoglossus_semilaevis
FBgn0033352	PAN2	96	42.244	ENSCVAG00000010197	pan2	98	41.172	Cyprinodon_variegatus
FBgn0033352	PAN2	96	41.584	ENSDARG00000074675	pan2	93	41.887	Danio_rerio
FBgn0033352	PAN2	96	41.612	ENSDNOG00000010940	PAN2	93	41.612	Dasypus_novemcinctus
FBgn0033352	PAN2	70	52.210	ENSETEG00000012041	PAN2	74	52.210	Echinops_telfairi
FBgn0033352	PAN2	95	38.565	ENSEBUG00000002773	pan2	91	38.565	Eptatretus_burgeri
FBgn0033352	PAN2	96	41.509	ENSEASG00005005235	PAN2	93	41.509	Equus_asinus_asinus
FBgn0033352	PAN2	96	41.311	ENSECAG00000019814	PAN2	93	41.345	Equus_caballus
FBgn0033352	PAN2	95	41.304	ENSELUG00000024604	pan2	93	41.017	Esox_lucius
FBgn0033352	PAN2	96	41.537	ENSFCAG00000012021	PAN2	93	41.537	Felis_catus
FBgn0033352	PAN2	96	42.289	ENSFALG00000000464	PAN2	93	42.987	Ficedula_albicollis
FBgn0033352	PAN2	96	41.735	ENSFDAG00000017104	PAN2	93	41.735	Fukomys_damarensis
FBgn0033352	PAN2	87	42.250	ENSFHEG00000000157	pan2	89	42.250	Fundulus_heteroclitus
FBgn0033352	PAN2	96	41.080	ENSGMOG00000007249	pan2	93	41.824	Gadus_morhua
FBgn0033352	PAN2	96	42.869	ENSGALG00000031512	PAN2	93	42.822	Gallus_gallus
FBgn0033352	PAN2	96	41.536	ENSGAFG00000000284	pan2	93	42.005	Gambusia_affinis
FBgn0033352	PAN2	98	40.637	ENSGACG00000010722	pan2	96	40.847	Gasterosteus_aculeatus
FBgn0033352	PAN2	96	42.422	ENSGAGG00000007868	PAN2	93	42.951	Gopherus_agassizii
FBgn0033352	PAN2	96	41.653	ENSGGOG00000009115	PAN2	93	41.653	Gorilla_gorilla
FBgn0033352	PAN2	99	41.417	ENSHBUG00000005234	pan2	98	41.575	Haplochromis_burtoni
FBgn0033352	PAN2	96	41.441	ENSHGLG00000005647	PAN2	93	41.441	Heterocephalus_glaber_female
FBgn0033352	PAN2	96	41.360	ENSHGLG00100014057	PAN2	93	41.360	Heterocephalus_glaber_male
FBgn0033352	PAN2	98	40.942	ENSHCOG00000007920	pan2	98	41.024	Hippocampus_comes
FBgn0033352	PAN2	96	41.653	ENSIPUG00000011065	PAN2	94	41.954	Ictalurus_punctatus
FBgn0033352	PAN2	93	41.758	ENSSTOG00000015974	PAN2	93	38.816	Ictidomys_tridecemlineatus
FBgn0033352	PAN2	96	41.351	ENSJJAG00000013044	Pan2	92	41.283	Jaculus_jaculus
FBgn0033352	PAN2	99	40.657	ENSKMAG00000006192	pan2	98	41.490	Kryptolebias_marmoratus
FBgn0033352	PAN2	87	47.745	ENSLBEG00000015763	pan2	89	48.276	Labrus_bergylta
FBgn0033352	PAN2	96	39.060	ENSLACG00000018694	PAN2	93	39.300	Latimeria_chalumnae
FBgn0033352	PAN2	96	41.331	ENSLOCG00000004333	pan2	93	41.708	Lepisosteus_oculatus
FBgn0033352	PAN2	96	40.920	ENSLAFG00000014873	PAN2	93	40.920	Loxodonta_africana
FBgn0033352	PAN2	96	41.317	ENSMFAG00000002293	PAN2	93	41.317	Macaca_fascicularis
FBgn0033352	PAN2	96	41.317	ENSMMUG00000013482	PAN2	93	41.317	Macaca_mulatta
FBgn0033352	PAN2	96	41.263	ENSMNEG00000033264	PAN2	93	41.263	Macaca_nemestrina
FBgn0033352	PAN2	96	41.393	ENSMLEG00000037388	PAN2	93	41.385	Mandrillus_leucophaeus
FBgn0033352	PAN2	98	40.376	ENSMAMG00000001624	pan2	98	40.816	Mastacembelus_armatus
FBgn0033352	PAN2	95	38.539	ENSMZEG00005026472	pan2	93	38.287	Maylandia_zebra
FBgn0033352	PAN2	99	41.417	ENSMZEG00005026462	pan2	98	41.575	Maylandia_zebra
FBgn0033352	PAN2	94	42.857	ENSMGAG00000001439	PAN2	94	42.427	Meleagris_gallopavo
FBgn0033352	PAN2	96	41.536	ENSMAUG00000012602	Pan2	93	41.536	Mesocricetus_auratus
FBgn0033352	PAN2	96	41.441	ENSMICG00000017661	PAN2	93	41.441	Microcebus_murinus
FBgn0033352	PAN2	96	41.502	ENSMOCG00000007191	Pan2	94	41.453	Microtus_ochrogaster
FBgn0033352	PAN2	95	41.054	ENSMMOG00000009313	pan2	90	41.960	Mola_mola
FBgn0033352	PAN2	98	40.391	ENSMALG00000013377	pan2	98	40.752	Monopterus_albus
FBgn0033352	PAN2	96	41.838	MGP_CAROLIEiJ_G0015930	Pan2	93	41.838	Mus_caroli
FBgn0033352	PAN2	96	42.018	ENSMUSG00000005682	Pan2	93	42.018	Mus_musculus
FBgn0033352	PAN2	96	41.914	MGP_PahariEiJ_G0031154	Pan2	93	41.914	Mus_pahari
FBgn0033352	PAN2	96	41.935	MGP_SPRETEiJ_G0016755	Pan2	93	41.935	Mus_spretus
FBgn0033352	PAN2	96	41.605	ENSMPUG00000001383	PAN2	93	41.605	Mustela_putorius_furo
FBgn0033352	PAN2	96	40.988	ENSMLUG00000006737	PAN2	93	41.099	Myotis_lucifugus
FBgn0033352	PAN2	96	41.933	ENSNGAG00000007930	Pan2	93	41.878	Nannospalax_galili
FBgn0033352	PAN2	78	67.347	ENSNBRG00000006585	pan2	84	67.347	Neolamprologus_brichardi
FBgn0033352	PAN2	99	39.151	ENSNLEG00000017499	PAN2	98	39.151	Nomascus_leucogenys
FBgn0033352	PAN2	96	42.502	ENSMEUG00000010125	PAN2	93	42.585	Notamacropus_eugenii
FBgn0033352	PAN2	96	41.626	ENSOPRG00000001468	PAN2	93	41.626	Ochotona_princeps
FBgn0033352	PAN2	96	42.110	ENSODEG00000007203	PAN2	93	42.110	Octodon_degus
FBgn0033352	PAN2	99	41.076	ENSONIG00000016732	pan2	98	41.621	Oreochromis_niloticus
FBgn0033352	PAN2	83	39.374	ENSOANG00000005151	PAN2	98	39.658	Ornithorhynchus_anatinus
FBgn0033352	PAN2	96	41.263	ENSOCUG00000007227	PAN2	93	41.263	Oryctolagus_cuniculus
FBgn0033352	PAN2	98	40.590	ENSORLG00000015195	pan2	97	41.363	Oryzias_latipes
FBgn0033352	PAN2	98	40.590	ENSORLG00020000277	pan2	97	41.335	Oryzias_latipes_hni
FBgn0033352	PAN2	98	40.632	ENSORLG00015005193	pan2	97	41.415	Oryzias_latipes_hsok
FBgn0033352	PAN2	98	40.553	ENSOMEG00000022087	pan2	97	41.335	Oryzias_melastigma
FBgn0033352	PAN2	96	41.114	ENSOGAG00000030620	PAN2	93	41.114	Otolemur_garnettii
FBgn0033352	PAN2	96	40.868	ENSOARG00000009379	PAN2	93	40.868	Ovis_aries
FBgn0033352	PAN2	96	41.181	ENSPPAG00000001208	PAN2	93	41.181	Pan_paniscus
FBgn0033352	PAN2	96	41.537	ENSPPRG00000021586	PAN2	93	41.537	Panthera_pardus
FBgn0033352	PAN2	96	39.788	ENSPTIG00000012494	PAN2	93	39.788	Panthera_tigris_altaica
FBgn0033352	PAN2	96	41.181	ENSPTRG00000052054	PAN2	93	41.181	Pan_troglodytes
FBgn0033352	PAN2	93	41.028	ENSPANG00000018906	PAN2	98	41.062	Papio_anubis
FBgn0033352	PAN2	96	41.784	ENSPKIG00000003973	pan2	93	42.114	Paramormyrops_kingsleyae
FBgn0033352	PAN2	96	41.481	ENSPSIG00000003267	PAN2	93	42.058	Pelodiscus_sinensis
FBgn0033352	PAN2	98	41.261	ENSPMGG00000023186	pan2	97	41.421	Periophthalmus_magnuspinnatus
FBgn0033352	PAN2	96	41.419	ENSPEMG00000018505	Pan2	93	41.419	Peromyscus_maniculatus_bairdii
FBgn0033352	PAN2	93	39.983	ENSPMAG00000004731	pan2	100	39.983	Petromyzon_marinus
FBgn0033352	PAN2	96	42.336	ENSPCIG00000024643	PAN2	93	42.419	Phascolarctos_cinereus
FBgn0033352	PAN2	98	40.873	ENSPFOG00000008392	pan2	93	42.092	Poecilia_formosa
FBgn0033352	PAN2	99	40.598	ENSPLAG00000009198	pan2	95	41.200	Poecilia_latipinna
FBgn0033352	PAN2	96	41.646	ENSPMEG00000001484	pan2	93	42.114	Poecilia_mexicana
FBgn0033352	PAN2	98	40.764	ENSPREG00000000900	pan2	97	41.214	Poecilia_reticulata
FBgn0033352	PAN2	78	47.816	ENSPPYG00000004656	PAN2	89	47.816	Pongo_abelii
FBgn0033352	PAN2	93	40.928	ENSPCAG00000011047	PAN2	98	40.828	Procavia_capensis
FBgn0033352	PAN2	96	40.738	ENSPCOG00000018263	PAN2	93	41.181	Propithecus_coquereli
FBgn0033352	PAN2	91	41.758	ENSPVAG00000007591	PAN2	88	41.758	Pteropus_vampyrus
FBgn0033352	PAN2	99	41.417	ENSPNYG00000002629	pan2	98	41.575	Pundamilia_nyererei
FBgn0033352	PAN2	96	41.570	ENSPNAG00000027140	pan2	93	41.914	Pygocentrus_nattereri
FBgn0033352	PAN2	96	41.853	ENSRNOG00000032441	Pan2	93	41.853	Rattus_norvegicus
FBgn0033352	PAN2	96	41.181	ENSRBIG00000029591	PAN2	93	41.181	Rhinopithecus_bieti
FBgn0033352	PAN2	96	41.263	ENSRROG00000041950	PAN2	88	47.202	Rhinopithecus_roxellana
FBgn0033352	PAN2	71	37.569	YGL094C	-	79	37.293	Saccharomyces_cerevisiae
FBgn0033352	PAN2	96	41.181	ENSSBOG00000027343	PAN2	93	41.138	Saimiri_boliviensis_boliviensis
FBgn0033352	PAN2	93	42.249	ENSSHAG00000000122	PAN2	98	42.667	Sarcophilus_harrisii
FBgn0033352	PAN2	96	41.413	ENSSFOG00015017740	pan2	93	41.824	Scleropages_formosus
FBgn0033352	PAN2	98	40.400	ENSSMAG00000020901	pan2	96	41.040	Scophthalmus_maximus
FBgn0033352	PAN2	96	41.393	ENSSDUG00000001840	pan2	93	42.049	Seriola_dumerili
FBgn0033352	PAN2	96	41.393	ENSSLDG00000013866	pan2	93	42.049	Seriola_lalandi_dorsalis
FBgn0033352	PAN2	86	41.347	ENSSARG00000013350	PAN2	83	41.347	Sorex_araneus
FBgn0033352	PAN2	93	42.141	ENSSPUG00000004270	PAN2	97	42.821	Sphenodon_punctatus
FBgn0033352	PAN2	98	40.523	ENSSPAG00000019970	pan2	96	41.050	Stegastes_partitus
FBgn0033352	PAN2	96	41.509	ENSSSCG00000000393	PAN2	94	40.531	Sus_scrofa
FBgn0033352	PAN2	99	40.530	ENSTRUG00000014260	pan2	98	41.204	Takifugu_rubripes
FBgn0033352	PAN2	99	40.706	ENSTNIG00000012537	pan2	97	40.991	Tetraodon_nigroviridis
FBgn0033352	PAN2	74	41.762	ENSTTRG00000007150	PAN2	71	41.762	Tursiops_truncatus
FBgn0033352	PAN2	96	41.360	ENSUAMG00000026522	PAN2	94	41.360	Ursus_americanus
FBgn0033352	PAN2	96	41.196	ENSUMAG00000017020	PAN2	93	41.196	Ursus_maritimus
FBgn0033352	PAN2	66	68.715	ENSVPAG00000007309	PAN2	73	68.715	Vicugna_pacos
FBgn0033352	PAN2	96	41.230	ENSVVUG00000021878	PAN2	93	41.230	Vulpes_vulpes
FBgn0033352	PAN2	96	41.502	ENSXETG00000009434	pan2	95	41.494	Xenopus_tropicalis
FBgn0033352	PAN2	96	39.227	ENSXCOG00000014391	pan2	93	39.934	Xiphophorus_couchianus
FBgn0033352	PAN2	96	41.838	ENSXMAG00000011661	pan2	93	42.469	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000289	nuclear-transcribed mRNA poly(A) tail shortening	21873635.	IBA	Process
GO:0000289	nuclear-transcribed mRNA poly(A) tail shortening	17545151.	IGI	Process
GO:0000289	nuclear-transcribed mRNA poly(A) tail shortening	-	ISS	Process
GO:0000932	P-body	21873635.	IBA	Component
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0004535	poly(A)-specific ribonuclease activity	21873635.	IBA	Function
GO:0004535	poly(A)-specific ribonuclease activity	-	ISS	Function
GO:0005515	protein binding	21981923.	IPI	Function
GO:0006397	mRNA processing	-	IEA	Process
GO:0031251	PAN complex	21873635.	IBA	Component
GO:0031251	PAN complex	-	ISS	Component