EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0033378 (Gene tree)
Gene ID: 35924
Gene Symbol: tsu
Alias: -
Full Name: tsunagi
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Plus strand
Length: 780 bases
Position: chr2R:9110799-9111578
Accession: FBgn0033378
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0087648	RRM_1	PF00076.22	2.8e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0088567	-	691	-	FBpp0087648	165 (aa)	-	Q9V535

Gene Model

Click here to download FBgn0033378's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0033378's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0033378	tsu	92	64.935	ENSG00000265241	RBM8A	91	68.750	Homo_sapiens
FBgn0033378	tsu	96	62.733	ENSAPOG00000009727	rbm8a	94	61.310	Acanthochromis_polyacanthus
FBgn0033378	tsu	92	63.694	ENSAMEG00000017623	RBM8A	95	61.988	Ailuropoda_melanoleuca
FBgn0033378	tsu	96	63.580	ENSACIG00000017678	rbm8a	99	63.580	Amphilophus_citrinellus
FBgn0033378	tsu	96	62.733	ENSAOCG00000023887	rbm8a	80	61.310	Amphiprion_ocellaris
FBgn0033378	tsu	96	62.733	ENSAPEG00000022847	rbm8a	80	61.310	Amphiprion_percula
FBgn0033378	tsu	96	63.354	ENSATEG00000005630	rbm8a	94	61.905	Anabas_testudineus
FBgn0033378	tsu	92	64.935	ENSANAG00000004525	RBM8A	95	63.095	Aotus_nancymaae
FBgn0033378	tsu	96	63.354	ENSACLG00000009627	rbm8a	94	61.905	Astatotilapia_calliptera
FBgn0033378	tsu	92	63.636	ENSAMXG00000040754	rbm8a	95	61.905	Astyanax_mexicanus
FBgn0033378	tsu	76	57.937	WBGene00004387	rnp-4	87	57.937	Caenorhabditis_elegans
FBgn0033378	tsu	92	64.935	ENSCJAG00000046869	RBM8A	95	63.095	Callithrix_jacchus
FBgn0033378	tsu	92	64.935	ENSCAFG00000023172	RBM8A	95	63.095	Canis_familiaris
FBgn0033378	tsu	92	64.935	ENSCAFG00020019945	RBM8A	95	63.095	Canis_lupus_dingo
FBgn0033378	tsu	92	64.935	ENSCHIG00000012114	RBM8A	95	63.095	Capra_hircus
FBgn0033378	tsu	92	64.935	ENSTSYG00000028809	RBM8A	95	63.095	Carlito_syrichta
FBgn0033378	tsu	67	66.364	ENSCAPG00000014086	RBM8A	91	65.217	Cavia_aperea
FBgn0033378	tsu	96	63.975	ENSCPOG00000022453	RBM8A	100	62.573	Cavia_porcellus
FBgn0033378	tsu	92	64.935	ENSCCAG00000028589	-	95	63.095	Cebus_capucinus
FBgn0033378	tsu	92	64.935	ENSCCAG00000022460	-	95	63.095	Cebus_capucinus
FBgn0033378	tsu	92	64.935	ENSCATG00000021691	RBM8A	95	63.095	Cercocebus_atys
FBgn0033378	tsu	92	64.935	ENSCLAG00000000547	RBM8A	95	63.095	Chinchilla_lanigera
FBgn0033378	tsu	92	64.935	ENSCSAG00000001779	RBM8A	95	63.095	Chlorocebus_sabaeus
FBgn0033378	tsu	92	64.935	ENSCPBG00000007941	RBM8A	76	63.095	Chrysemys_picta_bellii
FBgn0033378	tsu	93	53.896	ENSCING00000004877	-	100	51.479	Ciona_intestinalis
FBgn0033378	tsu	93	55.484	ENSCSAVG00000005685	-	100	52.941	Ciona_savignyi
FBgn0033378	tsu	92	64.935	ENSCANG00000042182	RBM8A	95	63.095	Colobus_angolensis_palliatus
FBgn0033378	tsu	94	55.063	ENSCGRG00001003032	-	94	54.491	Cricetulus_griseus_chok1gshd
FBgn0033378	tsu	92	64.935	ENSCGRG00001002681	-	95	63.095	Cricetulus_griseus_chok1gshd
FBgn0033378	tsu	92	64.935	ENSCGRG00000006832	-	95	63.095	Cricetulus_griseus_crigri
FBgn0033378	tsu	96	63.354	ENSCSEG00000011865	rbm8a	94	61.905	Cynoglossus_semilaevis
FBgn0033378	tsu	96	62.733	ENSCVAG00000020734	rbm8a	94	61.310	Cyprinodon_variegatus
FBgn0033378	tsu	94	63.924	ENSDARG00000016516	rbm8a	95	62.500	Danio_rerio
FBgn0033378	tsu	56	61.290	ENSDNOG00000025265	-	99	61.290	Dasypus_novemcinctus
FBgn0033378	tsu	92	64.935	ENSDORG00000027340	-	99	59.538	Dipodomys_ordii
FBgn0033378	tsu	94	57.325	ENSETEG00000017932	-	95	56.287	Echinops_telfairi
FBgn0033378	tsu	87	60.544	ENSETEG00000008411	-	82	60.544	Echinops_telfairi
FBgn0033378	tsu	95	60.377	ENSEBUG00000010386	rbm8a	100	56.180	Eptatretus_burgeri
FBgn0033378	tsu	92	64.935	ENSEASG00005007455	RBM8A	95	63.095	Equus_asinus_asinus
FBgn0033378	tsu	92	64.935	ENSECAG00000022024	RBM8A	95	63.095	Equus_caballus
FBgn0033378	tsu	92	42.208	ENSEEUG00000008823	RBM8A	95	42.262	Erinaceus_europaeus
FBgn0033378	tsu	93	63.694	ENSELUG00000012464	rbm8a	94	61.310	Esox_lucius
FBgn0033378	tsu	92	64.706	ENSFCAG00000033936	RBM8A	95	62.874	Felis_catus
FBgn0033378	tsu	92	64.935	ENSFDAG00000020821	RBM8A	95	63.095	Fukomys_damarensis
FBgn0033378	tsu	96	62.112	ENSFHEG00000013538	rbm8a	94	60.714	Fundulus_heteroclitus
FBgn0033378	tsu	85	62.676	ENSGMOG00000007353	rbm8a	99	58.491	Gadus_morhua
FBgn0033378	tsu	92	58.170	ENSGALG00000036283	RBM8A	94	56.287	Gallus_gallus
FBgn0033378	tsu	96	63.354	ENSGAFG00000021698	rbm8a	94	61.905	Gambusia_affinis
FBgn0033378	tsu	85	62.676	ENSGACG00000013157	rbm8a	93	61.074	Gasterosteus_aculeatus
FBgn0033378	tsu	92	64.935	ENSGAGG00000023769	RBM8A	95	63.095	Gopherus_agassizii
FBgn0033378	tsu	92	64.935	ENSGGOG00000037248	RBM8A	95	63.095	Gorilla_gorilla
FBgn0033378	tsu	96	62.963	ENSHBUG00000008827	rbm8a	99	62.963	Haplochromis_burtoni
FBgn0033378	tsu	92	64.935	ENSHGLG00000007303	RBM8A	95	63.095	Heterocephalus_glaber_female
FBgn0033378	tsu	92	64.935	ENSHGLG00100012468	RBM8A	95	63.095	Heterocephalus_glaber_male
FBgn0033378	tsu	95	61.635	ENSHCOG00000010122	rbm8a	94	59.524	Hippocampus_comes
FBgn0033378	tsu	93	64.968	ENSIPUG00000006525	rbm8a	85	63.095	Ictalurus_punctatus
FBgn0033378	tsu	92	64.935	ENSSTOG00000013917	RBM8A	95	63.095	Ictidomys_tridecemlineatus
FBgn0033378	tsu	92	64.935	ENSJJAG00000009488	-	95	63.095	Jaculus_jaculus
FBgn0033378	tsu	96	63.354	ENSKMAG00000014454	rbm8a	94	61.905	Kryptolebias_marmoratus
FBgn0033378	tsu	96	63.354	ENSLBEG00000015720	rbm8a	94	61.905	Labrus_bergylta
FBgn0033378	tsu	94	62.500	ENSLACG00000014365	RBM8A	95	61.176	Latimeria_chalumnae
FBgn0033378	tsu	94	62.658	ENSLOCG00000009082	rbm8a	95	61.310	Lepisosteus_oculatus
FBgn0033378	tsu	96	43.713	ENSLAFG00000011031	-	91	43.713	Loxodonta_africana
FBgn0033378	tsu	94	64.557	ENSLAFG00000021886	-	95	63.095	Loxodonta_africana
FBgn0033378	tsu	92	64.935	ENSMFAG00000045376	RBM8A	95	63.095	Macaca_fascicularis
FBgn0033378	tsu	96	60.947	ENSMMUG00000016051	RBM8A	99	60.947	Macaca_mulatta
FBgn0033378	tsu	92	64.935	ENSMNEG00000040422	RBM8A	95	63.095	Macaca_nemestrina
FBgn0033378	tsu	92	64.935	ENSMLEG00000039155	RBM8A	95	63.095	Mandrillus_leucophaeus
FBgn0033378	tsu	96	62.733	ENSMAMG00000010565	rbm8a	94	61.310	Mastacembelus_armatus
FBgn0033378	tsu	96	63.354	ENSMZEG00005016453	rbm8a	94	61.905	Maylandia_zebra
FBgn0033378	tsu	92	64.935	ENSMAUG00000016783	-	99	59.884	Mesocricetus_auratus
FBgn0033378	tsu	100	52.695	ENSMICG00000037163	-	94	55.484	Microcebus_murinus
FBgn0033378	tsu	92	64.935	ENSMICG00000031698	-	95	63.095	Microcebus_murinus
FBgn0033378	tsu	92	64.935	ENSMOCG00000017782	-	95	63.095	Microtus_ochrogaster
FBgn0033378	tsu	96	58.125	ENSMMOG00000017179	rbm8a	94	58.125	Mola_mola
FBgn0033378	tsu	92	64.935	ENSMODG00000018752	RBM8A	95	63.095	Monodelphis_domestica
FBgn0033378	tsu	96	62.733	ENSMALG00000010145	rbm8a	94	61.310	Monopterus_albus
FBgn0033378	tsu	92	64.286	MGP_CAROLIEiJ_G0014951	Rbm8a2	95	62.500	Mus_caroli
FBgn0033378	tsu	92	64.935	MGP_CAROLIEiJ_G0025383	Rbm8a	99	59.538	Mus_caroli
FBgn0033378	tsu	92	64.935	ENSMUSG00000078184	Rbm8a2	95	63.095	Mus_musculus
FBgn0033378	tsu	92	64.935	ENSMUSG00000038374	Rbm8a	99	59.538	Mus_musculus
FBgn0033378	tsu	92	64.935	MGP_PahariEiJ_G0026828	-	99	59.538	Mus_pahari
FBgn0033378	tsu	92	64.935	MGP_SPRETEiJ_G0026330	Rbm8a	99	59.538	Mus_spretus
FBgn0033378	tsu	92	64.935	ENSMPUG00000000775	RBM8A	95	63.095	Mustela_putorius_furo
FBgn0033378	tsu	92	60.265	ENSMLUG00000022711	-	95	58.182	Myotis_lucifugus
FBgn0033378	tsu	92	64.935	ENSMLUG00000017436	-	95	63.095	Myotis_lucifugus
FBgn0033378	tsu	94	64.557	ENSNGAG00000016038	-	95	63.095	Nannospalax_galili
FBgn0033378	tsu	96	63.354	ENSNBRG00000004541	rbm8a	94	61.905	Neolamprologus_brichardi
FBgn0033378	tsu	92	64.935	ENSNLEG00000029632	RBM8A	95	63.095	Nomascus_leucogenys
FBgn0033378	tsu	68	66.372	ENSMEUG00000016058	RBM8A	92	64.567	Notamacropus_eugenii
FBgn0033378	tsu	69	63.248	ENSOPRG00000013316	RBM8A	100	63.248	Ochotona_princeps
FBgn0033378	tsu	92	57.692	ENSODEG00000008563	-	95	56.471	Octodon_degus
FBgn0033378	tsu	92	64.935	ENSODEG00000000114	-	95	63.095	Octodon_degus
FBgn0033378	tsu	92	54.248	ENSODEG00000002094	-	94	53.293	Octodon_degus
FBgn0033378	tsu	96	63.354	ENSONIG00000008608	rbm8a	94	61.905	Oreochromis_niloticus
FBgn0033378	tsu	92	63.694	ENSOCUG00000025693	RBM8A	95	61.988	Oryctolagus_cuniculus
FBgn0033378	tsu	96	62.112	ENSORLG00000016263	rbm8a	94	60.714	Oryzias_latipes
FBgn0033378	tsu	96	62.112	ENSORLG00020012904	rbm8a	85	61.728	Oryzias_latipes_hni
FBgn0033378	tsu	96	62.112	ENSORLG00015018824	rbm8a	94	60.714	Oryzias_latipes_hsok
FBgn0033378	tsu	96	62.733	ENSOMEG00000021533	rbm8a	74	61.310	Oryzias_melastigma
FBgn0033378	tsu	92	63.694	ENSOGAG00000000202	RBM8A	95	61.988	Otolemur_garnettii
FBgn0033378	tsu	92	64.286	ENSOARG00000020634	RBM8A	95	62.500	Ovis_aries
FBgn0033378	tsu	92	64.935	ENSPPAG00000029116	RBM8A	95	63.095	Pan_paniscus
FBgn0033378	tsu	92	64.706	ENSPPRG00000008243	RBM8A	95	62.874	Panthera_pardus
FBgn0033378	tsu	92	64.935	ENSPTIG00000009472	RBM8A	95	63.095	Panthera_tigris_altaica
FBgn0033378	tsu	92	64.935	ENSPTRG00000001201	RBM8A	95	63.095	Pan_troglodytes
FBgn0033378	tsu	92	64.935	ENSPANG00000020584	RBM8A	95	63.095	Papio_anubis
FBgn0033378	tsu	95	62.893	ENSPKIG00000009551	rbm8a	70	61.310	Paramormyrops_kingsleyae
FBgn0033378	tsu	93	63.057	ENSPKIG00000020558	rbm8a	95	61.310	Paramormyrops_kingsleyae
FBgn0033378	tsu	96	62.733	ENSPMGG00000010122	rbm8a	94	61.310	Periophthalmus_magnuspinnatus
FBgn0033378	tsu	92	64.935	ENSPEMG00000018117	-	95	63.095	Peromyscus_maniculatus_bairdii
FBgn0033378	tsu	92	64.935	ENSPCIG00000011931	RBM8A	95	63.095	Phascolarctos_cinereus
FBgn0033378	tsu	96	63.354	ENSPFOG00000010695	rbm8a	94	61.905	Poecilia_formosa
FBgn0033378	tsu	96	63.354	ENSPLAG00000009183	rbm8a	94	61.905	Poecilia_latipinna
FBgn0033378	tsu	96	63.354	ENSPMEG00000013950	rbm8a	94	61.905	Poecilia_mexicana
FBgn0033378	tsu	96	62.963	ENSPREG00000017572	rbm8a	99	62.963	Poecilia_reticulata
FBgn0033378	tsu	92	64.935	ENSPPYG00000000929	RBM8A	95	63.095	Pongo_abelii
FBgn0033378	tsu	94	63.924	ENSPCAG00000002146	-	95	62.500	Procavia_capensis
FBgn0033378	tsu	92	64.935	ENSPCOG00000022886	RBM8A	95	63.095	Propithecus_coquereli
FBgn0033378	tsu	92	64.935	ENSPVAG00000014471	RBM8A	95	63.095	Pteropus_vampyrus
FBgn0033378	tsu	96	63.354	ENSPNYG00000013564	rbm8a	94	61.905	Pundamilia_nyererei
FBgn0033378	tsu	94	63.924	ENSPNAG00000028502	rbm8a	95	62.500	Pygocentrus_nattereri
FBgn0033378	tsu	92	64.935	ENSRNOG00000021215	Rbm8a	95	63.095	Rattus_norvegicus
FBgn0033378	tsu	92	64.706	ENSRBIG00000039233	RBM8A	95	62.874	Rhinopithecus_bieti
FBgn0033378	tsu	92	64.935	ENSRROG00000040324	-	95	63.095	Rhinopithecus_roxellana
FBgn0033378	tsu	92	63.399	ENSRROG00000033023	-	95	61.677	Rhinopithecus_roxellana
FBgn0033378	tsu	92	64.935	ENSSBOG00000031316	RBM8A	95	63.095	Saimiri_boliviensis_boliviensis
FBgn0033378	tsu	92	64.935	ENSSHAG00000018629	RBM8A	95	63.095	Sarcophilus_harrisii
FBgn0033378	tsu	93	64.968	ENSSFOG00015009007	rbm8a	95	63.095	Scleropages_formosus
FBgn0033378	tsu	94	64.557	ENSSFOG00015024171	rbm8a	95	63.690	Scleropages_formosus
FBgn0033378	tsu	96	62.733	ENSSMAG00000012998	rbm8a	94	61.310	Scophthalmus_maximus
FBgn0033378	tsu	96	63.354	ENSSDUG00000005911	rbm8a	94	61.905	Seriola_dumerili
FBgn0033378	tsu	96	63.354	ENSSLDG00000011664	rbm8a	94	61.905	Seriola_lalandi_dorsalis
FBgn0033378	tsu	92	64.935	ENSSARG00000013289	RBM8A	95	63.095	Sorex_araneus
FBgn0033378	tsu	92	64.286	ENSSPUG00000001576	RBM8A	95	62.500	Sphenodon_punctatus
FBgn0033378	tsu	96	62.733	ENSSPAG00000012181	rbm8a	94	61.310	Stegastes_partitus
FBgn0033378	tsu	92	64.935	ENSSSCG00000028509	RBM8A	95	63.095	Sus_scrofa
FBgn0033378	tsu	92	62.338	ENSTGUG00000004447	RBM8A	95	60.714	Taeniopygia_guttata
FBgn0033378	tsu	96	60.248	ENSTRUG00000013173	rbm8a	94	58.929	Takifugu_rubripes
FBgn0033378	tsu	96	61.491	ENSTNIG00000006869	rbm8a	94	60.119	Tetraodon_nigroviridis
FBgn0033378	tsu	69	63.248	ENSTBEG00000014947	RBM8A	100	63.248	Tupaia_belangeri
FBgn0033378	tsu	71	65.254	ENSTTRG00000009081	RBM8A	93	63.889	Tursiops_truncatus
FBgn0033378	tsu	92	64.935	ENSUAMG00000021929	RBM8A	95	63.095	Ursus_americanus
FBgn0033378	tsu	92	64.935	ENSUMAG00000010298	RBM8A	95	63.095	Ursus_maritimus
FBgn0033378	tsu	92	64.935	ENSVVUG00000007486	RBM8A	95	63.095	Vulpes_vulpes
FBgn0033378	tsu	96	63.354	ENSXCOG00000004369	rbm8a	94	61.905	Xiphophorus_couchianus
FBgn0033378	tsu	96	63.354	ENSXMAG00000013463	rbm8a	99	61.728	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000184	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	21873635.	IBA	Process
GO:0000226	microtubule cytoskeleton organization	11691839.	IMP	Process
GO:0000335	negative regulation of transposition, DNA-mediated	25081352.	IMP	Process
GO:0000381	regulation of alternative mRNA splicing, via spliceosome	21873635.	IBA	Process
GO:0000398	mRNA splicing, via spliceosome	18981222.	IC	Process
GO:0003729	mRNA binding	21873635.	IBA	Function
GO:0003729	mRNA binding	10908586.11691839.	ISS	Function
GO:0005515	protein binding	12483225.14968132.	IPI	Function
GO:0005634	nucleus	11691839.11743026.17628520.	IDA	Component
GO:0005737	cytoplasm	11691839.17628520.	IDA	Component
GO:0007294	germarium-derived oocyte fate determination	17628520.	IMP	Process
GO:0007310	oocyte dorsal/ventral axis specification	11691839.	IMP	Process
GO:0007314	oocyte anterior/posterior axis specification	11691839.	IMP	Process
GO:0007317	regulation of pole plasm oskar mRNA localization	11691839.	IMP	Process
GO:0007317	regulation of pole plasm oskar mRNA localization	11691839.	IPI	Process
GO:0008380	RNA splicing	25081352.	IMP	Process
GO:0035145	exon-exon junction complex	21873635.	IBA	Component
GO:0035145	exon-exon junction complex	20045686.	IPI	Component
GO:0045451	pole plasm oskar mRNA localization	12441250.12446149.	TAS	Process
GO:0046595	establishment of pole plasm mRNA localization	12441250.	TAS	Process
GO:0051663	oocyte nucleus localization involved in oocyte dorsal/ventral axis specification	11691839.	IMP	Process
GO:0071013	catalytic step 2 spliceosome	18981222.	HDA	Component