EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0033450 (Gene tree)
Gene ID: 36013
Gene Symbol: Lsm11
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Minus strand
Length: 1067 bases
Position: chr2R:9838434-9839500
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0087569	LSM	PF01423.22	1.3e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0088485	-	1067	-	FBpp0087569	256 (aa)	-	A1Z802

Gene Model

Click here to download FBgn0033450's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0033450's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0033450	Lsm11	99	30.132	ENSCSEG00000019951	lsm11	91	30.132	Cynoglossus_semilaevis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000381	regulation of alternative mRNA splicing, via spliceosome	15492211.	HMP	Process
GO:0005515	protein binding	19450530.21525146.	IPI	Function
GO:0005634	nucleus	15492211.	IC	Component
GO:0005634	nucleus	18042462.	IDA	Component
GO:0005683	U7 snRNP	21873635.	IBA	Component
GO:0006398	mRNA 3'-end processing by stem-loop binding and cleavage	21873635.	IBA	Process
GO:0006398	mRNA 3'-end processing by stem-loop binding and cleavage	18042462.19450530.19620235.	IMP	Process
GO:0016604	nuclear body	17595295.	IDA	Component
GO:0035363	histone locus body	16533947.17442888.19158395.	IDA	Component
GO:0071204	histone pre-mRNA 3'end processing complex	21525146.	IDA	Component
GO:0071209	U7 snRNA binding	21873635.	IBA	Function
GO:0071254	cytoplasmic U snRNP body	17595295.	IDA	Component