EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0033473 (Gene tree)
Gene ID: 36042
Gene Symbol: CG12128
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: confidence
Strand: Plus strand
Length: 3830 bases
Position: chr2R:10026839-10030668
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0087481	Methyltrn_RNA_3	PF02598.17	1.3e-105	1	1
FBpp0087482	Methyltrn_RNA_3	PF02598.17	4.8e-44	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27197210	The mRNA-bound proteome of the early fly embryo	IC & embryos	2016 Apr 28	Wessels HH	DOI: 10.1101/gr.200386.115

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0088394	-	3691	-	FBpp0087482	250 (aa)	-	A1Z831
FBtr0088393	-	1596	-	FBpp0087481	485 (aa)	-	A1Z830

Gene Model

Click here to download FBgn0033473's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0033473's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0033473	CG12128	64	52.244	ENSG00000198917	SPOUT1	93	47.632	Homo_sapiens
FBgn0033473	CG12128	74	49.724	ENSAPOG00000021073	spout1	92	49.724	Acanthochromis_polyacanthus
FBgn0033473	CG12128	70	50.291	ENSAMEG00000015808	SPOUT1	93	47.632	Ailuropoda_melanoleuca
FBgn0033473	CG12128	69	51.009	ENSACIG00000001649	spout1	97	50.565	Amphilophus_citrinellus
FBgn0033473	CG12128	74	49.171	ENSAOCG00000001097	spout1	93	49.171	Amphiprion_ocellaris
FBgn0033473	CG12128	74	49.171	ENSAPEG00000022391	spout1	92	49.171	Amphiprion_percula
FBgn0033473	CG12128	74	49.584	ENSATEG00000012696	spout1	94	49.584	Anabas_testudineus
FBgn0033473	CG12128	63	52.581	ENSAPLG00000005094	SPOUT1	93	49.552	Anas_platyrhynchos
FBgn0033473	CG12128	62	53.947	ENSACAG00000000010	SPOUT1	91	53.226	Anolis_carolinensis
FBgn0033473	CG12128	64	53.055	ENSANAG00000036350	SPOUT1	93	48.603	Aotus_nancymaae
FBgn0033473	CG12128	74	50.552	ENSACLG00000027828	spout1	94	50.552	Astatotilapia_calliptera
FBgn0033473	CG12128	74	47.107	ENSAMXG00000014331	spout1	93	47.107	Astyanax_mexicanus
FBgn0033473	CG12128	74	48.118	ENSBTAG00000012485	SPOUT1	93	47.354	Bos_taurus
FBgn0033473	CG12128	73	36.927	WBGene00015160	B0361.6	87	37.752	Caenorhabditis_elegans
FBgn0033473	CG12128	63	52.597	ENSCJAG00000020221	SPOUT1	93	47.632	Callithrix_jacchus
FBgn0033473	CG12128	70	50.000	ENSCAFG00000020032	SPOUT1	93	47.911	Canis_familiaris
FBgn0033473	CG12128	70	50.000	ENSCAFG00020022980	SPOUT1	93	47.911	Canis_lupus_dingo
FBgn0033473	CG12128	71	49.422	ENSCHIG00000010025	SPOUT1	90	48.397	Capra_hircus
FBgn0033473	CG12128	64	52.548	ENSTSYG00000030758	SPOUT1	93	48.189	Carlito_syrichta
FBgn0033473	CG12128	70	50.725	ENSCAPG00000008073	SPOUT1	94	48.324	Cavia_aperea
FBgn0033473	CG12128	67	50.904	ENSCPOG00000004710	SPOUT1	93	48.199	Cavia_porcellus
FBgn0033473	CG12128	64	52.564	ENSCCAG00000037842	SPOUT1	93	47.911	Cebus_capucinus
FBgn0033473	CG12128	62	52.961	ENSCATG00000042611	SPOUT1	93	47.899	Cercocebus_atys
FBgn0033473	CG12128	71	47.324	ENSCLAG00000006487	SPOUT1	88	47.658	Chinchilla_lanigera
FBgn0033473	CG12128	70	45.000	ENSCPBG00000023348	SPOUT1	93	44.353	Chrysemys_picta_bellii
FBgn0033473	CG12128	71	48.286	ENSCING00000008293	-	90	48.368	Ciona_intestinalis
FBgn0033473	CG12128	73	47.207	ENSCSAVG00000006037	-	96	47.207	Ciona_savignyi
FBgn0033473	CG12128	64	52.258	ENSCANG00000029127	SPOUT1	93	47.899	Colobus_angolensis_palliatus
FBgn0033473	CG12128	74	49.459	ENSCGRG00001022370	Spout1	93	48.739	Cricetulus_griseus_chok1gshd
FBgn0033473	CG12128	63	51.307	ENSCGRG00000008439	Spout1	84	50.512	Cricetulus_griseus_crigri
FBgn0033473	CG12128	72	49.284	ENSCSEG00000015216	spout1	99	49.284	Cynoglossus_semilaevis
FBgn0033473	CG12128	77	49.468	ENSCVAG00000015713	spout1	96	49.468	Cyprinodon_variegatus
FBgn0033473	CG12128	64	51.935	ENSDARG00000019707	spout1	92	46.743	Danio_rerio
FBgn0033473	CG12128	53	49.810	ENSDNOG00000007388	SPOUT1	98	46.440	Dasypus_novemcinctus
FBgn0033473	CG12128	74	49.062	ENSDORG00000008670	Spout1	93	48.611	Dipodomys_ordii
FBgn0033473	CG12128	72	49.030	ENSEBUG00000005700	spout1	95	48.396	Eptatretus_burgeri
FBgn0033473	CG12128	70	50.144	ENSEASG00005007715	SPOUT1	94	50.286	Equus_asinus_asinus
FBgn0033473	CG12128	70	50.000	ENSECAG00000010177	SPOUT1	93	47.632	Equus_caballus
FBgn0033473	CG12128	74	48.619	ENSELUG00000022737	spout1	93	48.619	Esox_lucius
FBgn0033473	CG12128	74	48.118	ENSFCAG00000030593	SPOUT1	87	47.354	Felis_catus
FBgn0033473	CG12128	57	51.408	ENSFALG00000001420	SPOUT1	88	48.588	Ficedula_albicollis
FBgn0033473	CG12128	74	49.062	ENSFDAG00000012125	SPOUT1	92	48.333	Fukomys_damarensis
FBgn0033473	CG12128	79	49.086	ENSFHEG00000000075	spout1	99	49.086	Fundulus_heteroclitus
FBgn0033473	CG12128	73	47.671	ENSGMOG00000015985	spout1	91	47.727	Gadus_morhua
FBgn0033473	CG12128	72	50.986	ENSGALG00000004622	SPOUT1	89	51.304	Gallus_gallus
FBgn0033473	CG12128	76	49.867	ENSGAFG00000013577	spout1	97	49.867	Gambusia_affinis
FBgn0033473	CG12128	62	51.495	ENSGAGG00000021109	SPOUT1	85	51.203	Gopherus_agassizii
FBgn0033473	CG12128	64	52.244	ENSGGOG00000014228	SPOUT1	93	47.911	Gorilla_gorilla
FBgn0033473	CG12128	73	51.130	ENSHBUG00000008743	spout1	87	51.026	Haplochromis_burtoni
FBgn0033473	CG12128	74	48.257	ENSHGLG00000011378	SPOUT1	93	47.500	Heterocephalus_glaber_female
FBgn0033473	CG12128	74	48.257	ENSHGLG00100018401	SPOUT1	92	47.500	Heterocephalus_glaber_male
FBgn0033473	CG12128	73	48.876	ENSHCOG00000001622	spout1	92	49.438	Hippocampus_comes
FBgn0033473	CG12128	78	45.337	ENSIPUG00000006486	spout1	99	46.373	Ictalurus_punctatus
FBgn0033473	CG12128	74	47.721	ENSSTOG00000015657	SPOUT1	92	47.222	Ictidomys_tridecemlineatus
FBgn0033473	CG12128	74	50.829	ENSKMAG00000009988	spout1	93	50.829	Kryptolebias_marmoratus
FBgn0033473	CG12128	79	47.781	ENSLBEG00000024217	spout1	98	47.781	Labrus_bergylta
FBgn0033473	CG12128	62	50.987	ENSLACG00000015521	SPOUT1	89	48.246	Latimeria_chalumnae
FBgn0033473	CG12128	75	48.229	ENSLOCG00000004143	spout1	94	48.229	Lepisosteus_oculatus
FBgn0033473	CG12128	70	49.419	ENSLAFG00000014778	SPOUT1	93	47.354	Loxodonta_africana
FBgn0033473	CG12128	63	52.941	ENSMFAG00000016739	SPOUT1	93	48.179	Macaca_fascicularis
FBgn0033473	CG12128	63	52.941	ENSMMUG00000047511	SPOUT1	93	48.179	Macaca_mulatta
FBgn0033473	CG12128	63	52.614	ENSMNEG00000042898	SPOUT1	93	47.899	Macaca_nemestrina
FBgn0033473	CG12128	63	52.941	ENSMLEG00000028562	SPOUT1	93	47.899	Mandrillus_leucophaeus
FBgn0033473	CG12128	79	47.150	ENSMAMG00000018243	spout1	99	47.150	Mastacembelus_armatus
FBgn0033473	CG12128	70	50.882	ENSMZEG00005003159	spout1	85	50.882	Maylandia_zebra
FBgn0033473	CG12128	72	50.704	ENSMGAG00000004568	SPOUT1	87	51.014	Meleagris_gallopavo
FBgn0033473	CG12128	77	47.781	ENSMAUG00000021158	Spout1	85	48.045	Mesocricetus_auratus
FBgn0033473	CG12128	64	52.244	ENSMICG00000017649	SPOUT1	93	47.911	Microcebus_murinus
FBgn0033473	CG12128	75	48.229	ENSMMOG00000004595	spout1	95	48.229	Mola_mola
FBgn0033473	CG12128	70	49.711	ENSMODG00000006461	-	89	49.422	Monodelphis_domestica
FBgn0033473	CG12128	74	50.970	ENSMALG00000012358	spout1	92	50.970	Monopterus_albus
FBgn0033473	CG12128	63	53.571	MGP_CAROLIEiJ_G0023384	Spout1	91	48.056	Mus_caroli
FBgn0033473	CG12128	74	48.525	ENSMUSG00000039660	Spout1	91	47.778	Mus_musculus
FBgn0033473	CG12128	74	48.794	MGP_PahariEiJ_G0024841	Spout1	91	48.333	Mus_pahari
FBgn0033473	CG12128	74	48.794	MGP_SPRETEiJ_G0024301	Spout1	91	48.056	Mus_spretus
FBgn0033473	CG12128	68	48.949	ENSMPUG00000013017	SPOUT1	89	47.486	Mustela_putorius_furo
FBgn0033473	CG12128	59	50.859	ENSMLUG00000014330	SPOUT1	89	44.571	Myotis_lucifugus
FBgn0033473	CG12128	71	50.575	ENSNGAG00000000907	Spout1	93	49.851	Nannospalax_galili
FBgn0033473	CG12128	54	52.941	ENSNBRG00000007733	spout1	81	46.847	Neolamprologus_brichardi
FBgn0033473	CG12128	64	52.244	ENSNLEG00000017619	SPOUT1	93	47.354	Nomascus_leucogenys
FBgn0033473	CG12128	71	46.927	ENSODEG00000002093	-	91	46.927	Octodon_degus
FBgn0033473	CG12128	73	50.565	ENSONIG00000011299	spout1	87	51.026	Oreochromis_niloticus
FBgn0033473	CG12128	71	46.761	ENSOANG00000003336	SPOUT1	87	46.761	Ornithorhynchus_anatinus
FBgn0033473	CG12128	73	42.737	ENSOCUG00000026059	-	90	42.319	Oryctolagus_cuniculus
FBgn0033473	CG12128	74	49.189	ENSOCUG00000008882	-	93	48.459	Oryctolagus_cuniculus
FBgn0033473	CG12128	66	44.817	ENSOCUG00000016127	-	91	43.553	Oryctolagus_cuniculus
FBgn0033473	CG12128	71	49.425	ENSORLG00000004049	spout1	98	49.008	Oryzias_latipes
FBgn0033473	CG12128	73	49.014	ENSORLG00020009297	spout1	94	48.611	Oryzias_latipes_hni
FBgn0033473	CG12128	73	49.296	ENSORLG00015016211	spout1	94	48.889	Oryzias_latipes_hsok
FBgn0033473	CG12128	73	49.014	ENSOMEG00000011687	spout1	90	48.611	Oryzias_melastigma
FBgn0033473	CG12128	70	49.419	ENSOGAG00000001655	SPOUT1	94	46.092	Otolemur_garnettii
FBgn0033473	CG12128	71	46.839	ENSOARG00000009282	SPOUT1	90	43.733	Ovis_aries
FBgn0033473	CG12128	74	46.900	ENSPPAG00000001094	SPOUT1	93	47.911	Pan_paniscus
FBgn0033473	CG12128	74	49.319	ENSPPRG00000014948	SPOUT1	93	48.588	Panthera_pardus
FBgn0033473	CG12128	70	49.709	ENSPTIG00000010445	SPOUT1	95	47.238	Panthera_tigris_altaica
FBgn0033473	CG12128	64	52.244	ENSPTRG00000023427	SPOUT1	93	47.911	Pan_troglodytes
FBgn0033473	CG12128	63	52.922	ENSPANG00000025932	SPOUT1	90	52.203	Papio_anubis
FBgn0033473	CG12128	74	47.527	ENSPKIG00000025099	spout1	94	47.527	Paramormyrops_kingsleyae
FBgn0033473	CG12128	64	51.447	ENSPSIG00000018152	SPOUT1	91	51.307	Pelodiscus_sinensis
FBgn0033473	CG12128	71	51.009	ENSPMGG00000004788	spout1	89	51.198	Periophthalmus_magnuspinnatus
FBgn0033473	CG12128	74	48.257	ENSPEMG00000009348	Spout1	93	47.778	Peromyscus_maniculatus_bairdii
FBgn0033473	CG12128	73	49.861	ENSPCIG00000030118	SPOUT1	89	50.000	Phascolarctos_cinereus
FBgn0033473	CG12128	75	49.454	ENSPFOG00000016043	SPOUT1	97	49.454	Poecilia_formosa
FBgn0033473	CG12128	75	49.454	ENSPFOG00000022119	spout1	97	49.454	Poecilia_formosa
FBgn0033473	CG12128	77	48.684	ENSPLAG00000021861	spout1	98	48.684	Poecilia_latipinna
FBgn0033473	CG12128	77	48.556	ENSPMEG00000009246	-	98	48.556	Poecilia_mexicana
FBgn0033473	CG12128	77	48.556	ENSPMEG00000010063	spout1	94	52.903	Poecilia_mexicana
FBgn0033473	CG12128	64	50.485	ENSPREG00000022001	spout1	94	50.485	Poecilia_reticulata
FBgn0033473	CG12128	64	52.564	ENSPPYG00000019664	-	74	48.189	Pongo_abelii
FBgn0033473	CG12128	64	52.244	ENSPCOG00000002584	SPOUT1	93	47.238	Propithecus_coquereli
FBgn0033473	CG12128	73	51.130	ENSPNYG00000003463	spout1	89	50.882	Pundamilia_nyererei
FBgn0033473	CG12128	73	47.500	ENSPNAG00000016265	spout1	89	47.550	Pygocentrus_nattereri
FBgn0033473	CG12128	74	49.062	ENSRNOG00000025711	Spout1	93	48.333	Rattus_norvegicus
FBgn0033473	CG12128	64	51.935	ENSRBIG00000026633	SPOUT1	93	47.619	Rhinopithecus_bieti
FBgn0033473	CG12128	64	52.258	ENSRROG00000038155	SPOUT1	93	47.619	Rhinopithecus_roxellana
FBgn0033473	CG12128	64	52.564	ENSSBOG00000032987	SPOUT1	93	47.911	Saimiri_boliviensis_boliviensis
FBgn0033473	CG12128	62	53.289	ENSSHAG00000018857	SPOUT1	93	49.568	Sarcophilus_harrisii
FBgn0033473	CG12128	72	47.458	ENSSFOG00015002867	spout1	97	47.458	Scleropages_formosus
FBgn0033473	CG12128	74	49.307	ENSSMAG00000009786	spout1	92	49.307	Scophthalmus_maximus
FBgn0033473	CG12128	74	50.416	ENSSDUG00000007894	spout1	92	50.416	Seriola_dumerili
FBgn0033473	CG12128	74	50.416	ENSSLDG00000014944	spout1	92	50.416	Seriola_lalandi_dorsalis
FBgn0033473	CG12128	73	47.011	ENSSPUG00000014052	SPOUT1	88	48.246	Sphenodon_punctatus
FBgn0033473	CG12128	73	47.011	ENSSPAG00000005823	spout1	97	47.011	Stegastes_partitus
FBgn0033473	CG12128	74	47.989	ENSSSCG00000005662	SPOUT1	93	47.500	Sus_scrofa
FBgn0033473	CG12128	72	50.284	ENSTGUG00000004201	SPOUT1	96	50.872	Taeniopygia_guttata
FBgn0033473	CG12128	74	49.171	ENSTRUG00000024910	spout1	92	49.171	Takifugu_rubripes
FBgn0033473	CG12128	73	49.860	ENSTNIG00000007505	spout1	93	50.729	Tetraodon_nigroviridis
FBgn0033473	CG12128	58	37.248	ENSTBEG00000007505	SPOUT1	72	36.913	Tupaia_belangeri
FBgn0033473	CG12128	59	34.899	ENSTTRG00000011616	SPOUT1	74	34.899	Tursiops_truncatus
FBgn0033473	CG12128	70	50.291	ENSUAMG00000016285	SPOUT1	93	47.632	Ursus_americanus
FBgn0033473	CG12128	70	50.291	ENSUMAG00000020628	SPOUT1	93	47.632	Ursus_maritimus
FBgn0033473	CG12128	73	49.438	ENSVVUG00000025999	SPOUT1	94	48.980	Vulpes_vulpes
FBgn0033473	CG12128	73	46.814	ENSXETG00000004745	spout1	94	51.140	Xenopus_tropicalis
FBgn0033473	CG12128	74	50.556	ENSXCOG00000001342	spout1	95	50.556	Xiphophorus_couchianus
FBgn0033473	CG12128	75	49.465	ENSXMAG00000005778	spout1	97	49.465	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003674	molecular_function	-	ND	Function
GO:0005575	cellular_component	-	ND	Component
GO:0008150	biological_process	-	ND	Process