EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0033475 (Gene tree)
Gene ID: 36044
Gene Symbol: CG12129
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: confidence
Strand: Plus strand
Length: 1395 bases
Position: chr2R:10033304-10034698
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0087483	KH_1	PF00013.29	8.2e-12	1	1
FBpp0087483	AKAP7_NLS	PF10469.9	1.5e-53	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27197210	The mRNA-bound proteome of the early fly embryo	IC & embryos	2016 Apr 28	Wessels HH	DOI: 10.1101/gr.200386.115

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0088395	-	1239	-	FBpp0087483	352 (aa)	-	Q7JW66

Gene Model

Click here to download FBgn0033475's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0033475's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0033475	CG12129	86	30.678	ENSG00000138303	ASCC1	87	34.483	Homo_sapiens
FBgn0033475	CG12129	89	30.973	ENSAPOG00000017956	ascc1	95	30.678	Acanthochromis_polyacanthus
FBgn0033475	CG12129	84	30.793	ENSAMEG00000017400	ASCC1	89	30.110	Ailuropoda_melanoleuca
FBgn0033475	CG12129	89	31.268	ENSAOCG00000009038	ascc1	95	31.268	Amphiprion_ocellaris
FBgn0033475	CG12129	89	31.268	ENSAPEG00000019742	ascc1	95	31.268	Amphiprion_percula
FBgn0033475	CG12129	85	36.957	ENSAPLG00000007456	ASCC1	85	36.688	Anas_platyrhynchos
FBgn0033475	CG12129	86	36.196	ENSACAG00000001244	ASCC1	94	34.393	Anolis_carolinensis
FBgn0033475	CG12129	86	31.045	ENSANAG00000027828	ASCC1	93	31.498	Aotus_nancymaae
FBgn0033475	CG12129	81	33.770	ENSAMXG00000011705	ascc1	85	33.770	Astyanax_mexicanus
FBgn0033475	CG12129	84	31.098	ENSBTAG00000000392	ASCC1	94	30.663	Bos_taurus
FBgn0033475	CG12129	74	30.357	WBGene00016019	C23H3.3	70	30.357	Caenorhabditis_elegans
FBgn0033475	CG12129	86	31.045	ENSCJAG00000007273	ASCC1	92	30.952	Callithrix_jacchus
FBgn0033475	CG12129	80	31.746	ENSCAFG00000014415	ASCC1	88	33.333	Canis_familiaris
FBgn0033475	CG12129	80	31.746	ENSCAFG00020025090	ASCC1	78	33.333	Canis_lupus_dingo
FBgn0033475	CG12129	84	30.793	ENSCHIG00000020844	ASCC1	78	33.333	Capra_hircus
FBgn0033475	CG12129	86	30.357	ENSTSYG00000012145	ASCC1	80	32.069	Carlito_syrichta
FBgn0033475	CG12129	82	32.237	ENSCAPG00000005505	ASCC1	90	32.237	Cavia_aperea
FBgn0033475	CG12129	80	31.310	ENSCPOG00000001670	ASCC1	92	31.310	Cavia_porcellus
FBgn0033475	CG12129	86	31.045	ENSCCAG00000029607	ASCC1	92	30.952	Cebus_capucinus
FBgn0033475	CG12129	85	31.325	ENSCLAG00000012962	ASCC1	91	31.325	Chinchilla_lanigera
FBgn0033475	CG12129	85	30.861	ENSCSAG00000008531	ASCC1	75	32.653	Chlorocebus_sabaeus
FBgn0033475	CG12129	99	32.353	ENSCPBG00000025878	ASCC1	99	32.976	Chrysemys_picta_bellii
FBgn0033475	CG12129	79	32.542	ENSCING00000000491	-	84	32.542	Ciona_intestinalis
FBgn0033475	CG12129	93	31.180	ENSCGRG00001016548	Ascc1	94	31.180	Cricetulus_griseus_chok1gshd
FBgn0033475	CG12129	93	31.180	ENSCGRG00000009484	Ascc1	94	31.180	Cricetulus_griseus_crigri
FBgn0033475	CG12129	89	30.499	ENSCSEG00000017011	ascc1	84	31.353	Cynoglossus_semilaevis
FBgn0033475	CG12129	89	32.143	ENSCVAG00000004935	ascc1	98	31.871	Cyprinodon_variegatus
FBgn0033475	CG12129	66	31.349	ENSDARG00000077760	ascc1	99	31.349	Danio_rerio
FBgn0033475	CG12129	75	30.851	ENSDNOG00000006561	ASCC1	74	33.898	Dasypus_novemcinctus
FBgn0033475	CG12129	85	32.523	ENSDORG00000007065	Ascc1	91	32.523	Dipodomys_ordii
FBgn0033475	CG12129	64	35.458	ENSETEG00000000692	ASCC1	71	35.458	Echinops_telfairi
FBgn0033475	CG12129	80	31.746	ENSEASG00005016551	ASCC1	78	32.979	Equus_asinus_asinus
FBgn0033475	CG12129	80	31.746	ENSECAG00000017211	ASCC1	78	32.979	Equus_caballus
FBgn0033475	CG12129	80	35.548	ENSELUG00000013564	ascc1	84	35.548	Esox_lucius
FBgn0033475	CG12129	80	31.746	ENSFCAG00000026720	ASCC1	78	33.333	Felis_catus
FBgn0033475	CG12129	99	34.946	ENSFALG00000012676	ASCC1	99	33.962	Ficedula_albicollis
FBgn0033475	CG12129	85	32.530	ENSFDAG00000020297	ASCC1	91	32.537	Fukomys_damarensis
FBgn0033475	CG12129	99	30.894	ENSFHEG00000012251	ascc1	84	32.673	Fundulus_heteroclitus
FBgn0033475	CG12129	80	33.003	ENSGMOG00000000360	ascc1	86	33.003	Gadus_morhua
FBgn0033475	CG12129	99	33.333	ENSGALG00000026019	ASCC1	99	33.871	Gallus_gallus
FBgn0033475	CG12129	99	30.352	ENSGAFG00000004788	ascc1	99	30.352	Gambusia_affinis
FBgn0033475	CG12129	87	31.707	ENSGACG00000002371	ascc1	83	32.237	Gasterosteus_aculeatus
FBgn0033475	CG12129	82	32.907	ENSGAGG00000009896	ASCC1	82	35.294	Gopherus_agassizii
FBgn0033475	CG12129	86	30.678	ENSGGOG00000007559	ASCC1	80	32.653	Gorilla_gorilla
FBgn0033475	CG12129	85	32.530	ENSHGLG00000012359	ASCC1	80	33.219	Heterocephalus_glaber_female
FBgn0033475	CG12129	85	32.530	ENSHGLG00100012456	ASCC1	80	33.219	Heterocephalus_glaber_male
FBgn0033475	CG12129	99	31.081	ENSHCOG00000016151	ascc1	99	31.283	Hippocampus_comes
FBgn0033475	CG12129	80	32.013	ENSIPUG00000009943	ascc1	84	32.013	Ictalurus_punctatus
FBgn0033475	CG12129	85	31.818	ENSSTOG00000000689	ASCC1	91	31.818	Ictidomys_tridecemlineatus
FBgn0033475	CG12129	93	31.356	ENSJJAG00000009829	Ascc1	94	31.831	Jaculus_jaculus
FBgn0033475	CG12129	99	31.200	ENSKMAG00000014780	ascc1	99	31.200	Kryptolebias_marmoratus
FBgn0033475	CG12129	99	30.978	ENSLBEG00000016879	ascc1	99	30.790	Labrus_bergylta
FBgn0033475	CG12129	87	33.333	ENSLACG00000017431	ASCC1	85	34.098	Latimeria_chalumnae
FBgn0033475	CG12129	99	31.452	ENSLOCG00000005266	ascc1	99	31.452	Lepisosteus_oculatus
FBgn0033475	CG12129	85	31.532	ENSLAFG00000015184	ASCC1	83	32.895	Loxodonta_africana
FBgn0033475	CG12129	86	30.678	ENSMFAG00000042558	ASCC1	80	32.653	Macaca_fascicularis
FBgn0033475	CG12129	81	30.745	ENSMMUG00000009479	ASCC1	75	32.852	Macaca_mulatta
FBgn0033475	CG12129	86	30.678	ENSMNEG00000036564	ASCC1	80	32.653	Macaca_nemestrina
FBgn0033475	CG12129	86	30.678	ENSMLEG00000027895	ASCC1	80	32.653	Mandrillus_leucophaeus
FBgn0033475	CG12129	99	33.333	ENSMGAG00000005410	ASCC1	93	33.693	Meleagris_gallopavo
FBgn0033475	CG12129	86	31.024	ENSMICG00000004222	ASCC1	92	31.024	Microcebus_murinus
FBgn0033475	CG12129	85	31.915	ENSMOCG00000007733	Ascc1	91	31.515	Microtus_ochrogaster
FBgn0033475	CG12129	99	30.189	ENSMALG00000001855	ascc1	99	30.189	Monopterus_albus
FBgn0033475	CG12129	85	31.118	MGP_CAROLIEiJ_G0015351	Ascc1	91	31.118	Mus_caroli
FBgn0033475	CG12129	85	31.118	ENSMUSG00000044475	Ascc1	91	31.118	Mus_musculus
FBgn0033475	CG12129	85	31.118	MGP_PahariEiJ_G0030767	Ascc1	80	32.646	Mus_pahari
FBgn0033475	CG12129	84	30.793	ENSMPUG00000004088	ASCC1	72	33.333	Mustela_putorius_furo
FBgn0033475	CG12129	76	33.447	ENSMLUG00000005491	ASCC1	80	33.447	Myotis_lucifugus
FBgn0033475	CG12129	85	32.317	ENSNGAG00000022999	Ascc1	94	30.423	Nannospalax_galili
FBgn0033475	CG12129	83	30.351	ENSNBRG00000013947	ascc1	95	30.030	Neolamprologus_brichardi
FBgn0033475	CG12129	86	31.343	ENSNLEG00000016392	ASCC1	80	32.653	Nomascus_leucogenys
FBgn0033475	CG12129	50	37.500	ENSOPRG00000004965	ASCC1	55	37.500	Ochotona_princeps
FBgn0033475	CG12129	99	31.635	ENSOANG00000011748	ASCC1	99	31.635	Ornithorhynchus_anatinus
FBgn0033475	CG12129	85	31.915	ENSOCUG00000016753	ASCC1	91	32.121	Oryctolagus_cuniculus
FBgn0033475	CG12129	77	32.990	ENSORLG00000009163	ascc1	80	32.990	Oryzias_latipes
FBgn0033475	CG12129	80	31.683	ENSORLG00020006942	ascc1	84	31.803	Oryzias_latipes_hni
FBgn0033475	CG12129	80	31.683	ENSORLG00015006164	ascc1	84	31.803	Oryzias_latipes_hsok
FBgn0033475	CG12129	80	31.353	ENSOMEG00000011960	ascc1	84	31.353	Oryzias_melastigma
FBgn0033475	CG12129	79	30.449	ENSOGAG00000008212	ASCC1	75	31.271	Otolemur_garnettii
FBgn0033475	CG12129	84	30.793	ENSOARG00000007094	ASCC1	78	33.333	Ovis_aries
FBgn0033475	CG12129	86	30.678	ENSPPAG00000039805	ASCC1	80	32.653	Pan_paniscus
FBgn0033475	CG12129	80	32.063	ENSPPRG00000010572	ASCC1	78	33.333	Panthera_pardus
FBgn0033475	CG12129	80	32.063	ENSPTIG00000015725	ASCC1	78	33.333	Panthera_tigris_altaica
FBgn0033475	CG12129	86	31.343	ENSPTRG00000002609	ASCC1	80	32.653	Pan_troglodytes
FBgn0033475	CG12129	86	30.678	ENSPANG00000022316	ASCC1	80	32.653	Papio_anubis
FBgn0033475	CG12129	81	33.987	ENSPKIG00000007571	ascc1	85	33.987	Paramormyrops_kingsleyae
FBgn0033475	CG12129	73	34.221	ENSPSIG00000017791	ASCC1	96	34.221	Pelodiscus_sinensis
FBgn0033475	CG12129	86	32.831	ENSPEMG00000002244	Ascc1	80	33.562	Peromyscus_maniculatus_bairdii
FBgn0033475	CG12129	99	30.081	ENSPFOG00000023421	ascc1	84	32.013	Poecilia_formosa
FBgn0033475	CG12129	99	30.352	ENSPLAG00000001021	ascc1	84	32.343	Poecilia_latipinna
FBgn0033475	CG12129	89	31.176	ENSPMEG00000001736	ascc1	85	32.013	Poecilia_mexicana
FBgn0033475	CG12129	99	31.536	ENSPREG00000001944	ascc1	99	30.623	Poecilia_reticulata
FBgn0033475	CG12129	86	30.383	ENSPPYG00000002356	-	80	32.313	Pongo_abelii
FBgn0033475	CG12129	64	35.060	ENSPCAG00000012317	ASCC1	71	35.060	Procavia_capensis
FBgn0033475	CG12129	86	31.325	ENSPCOG00000017110	ASCC1	92	31.231	Propithecus_coquereli
FBgn0033475	CG12129	65	34.783	ENSPVAG00000001554	ASCC1	69	34.783	Pteropus_vampyrus
FBgn0033475	CG12129	68	35.060	ENSPNAG00000008666	ascc1	72	34.728	Pygocentrus_nattereri
FBgn0033475	CG12129	81	32.803	ENSRNOG00000056647	Ascc1	80	32.993	Rattus_norvegicus
FBgn0033475	CG12129	86	31.642	ENSRBIG00000033507	ASCC1	92	31.642	Rhinopithecus_bieti
FBgn0033475	CG12129	86	31.642	ENSRROG00000005189	ASCC1	92	31.642	Rhinopithecus_roxellana
FBgn0033475	CG12129	60	33.333	ENSSBOG00000022342	ASCC1	69	33.333	Saimiri_boliviensis_boliviensis
FBgn0033475	CG12129	99	32.976	ENSSHAG00000006413	ASCC1	99	32.976	Sarcophilus_harrisii
FBgn0033475	CG12129	81	36.721	ENSSFOG00015013939	ascc1	85	36.721	Scleropages_formosus
FBgn0033475	CG12129	64	34.661	ENSSARG00000001560	ASCC1	71	34.661	Sorex_araneus
FBgn0033475	CG12129	99	33.511	ENSSPUG00000010417	ASCC1	99	33.511	Sphenodon_punctatus
FBgn0033475	CG12129	87	31.915	ENSSPAG00000015588	ascc1	85	32.787	Stegastes_partitus
FBgn0033475	CG12129	84	30.793	ENSSSCG00000023130	ASCC1	78	33.333	Sus_scrofa
FBgn0033475	CG12129	99	31.707	ENSTRUG00000012576	ascc1	86	33.770	Takifugu_rubripes
FBgn0033475	CG12129	64	32.932	ENSTBEG00000005601	ASCC1	79	32.932	Tupaia_belangeri
FBgn0033475	CG12129	65	34.783	ENSTTRG00000009744	ASCC1	68	34.783	Tursiops_truncatus
FBgn0033475	CG12129	84	30.793	ENSUAMG00000009172	ASCC1	78	33.333	Ursus_americanus
FBgn0033475	CG12129	75	32.215	ENSUMAG00000008959	ASCC1	73	33.585	Ursus_maritimus
FBgn0033475	CG12129	66	35.102	ENSVPAG00000002811	ASCC1	75	35.102	Vicugna_pacos
FBgn0033475	CG12129	80	31.746	ENSVVUG00000022616	ASCC1	90	31.024	Vulpes_vulpes
FBgn0033475	CG12129	98	33.333	ENSXETG00000006149	ascc1	84	35.197	Xenopus_tropicalis
FBgn0033475	CG12129	99	30.623	ENSXCOG00000006169	ascc1	99	30.108	Xiphophorus_couchianus
FBgn0033475	CG12129	99	30.481	ENSXMAG00000014996	ascc1	85	32.787	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	-	IEA	Function