EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0033528 (Gene tree)
Gene ID: 36110
Gene Symbol: trsn
Alias: -
Full Name: translin
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: confidence
Strand: Minus strand
Length: 1101 bases
Position: chr2R:10479011-10480111
Accession: FBgn0033528
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0087398	Translin	PF01997.16	8.5e-54	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27378189	Global changes of the RNA bound proteome during the maternal-to-zygotic transition in Drosophila	IC & embryos.MZT	2016 Jul 5	Sysoev VO	DOI: 10.1038/ncomms12128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0088306	-	864	-	FBpp0087398	235 (aa)	-	Q6TMH4

Gene Model

Click here to download FBgn0033528's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0033528's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0033528	trsn	91	52.778	ENSG00000211460	TSN	95	52.778	Homo_sapiens
FBgn0033528	trsn	91	54.128	ENSAPOG00000002063	tsn	95	54.128	Acanthochromis_polyacanthus
FBgn0033528	trsn	90	53.271	ENSAMEG00000005055	TSN	94	53.271	Ailuropoda_melanoleuca
FBgn0033528	trsn	91	54.795	ENSACIG00000021694	tsn	95	54.795	Amphilophus_citrinellus
FBgn0033528	trsn	91	54.128	ENSAOCG00000015574	tsn	96	56.061	Amphiprion_ocellaris
FBgn0033528	trsn	91	54.128	ENSAPEG00000001677	tsn	95	54.128	Amphiprion_percula
FBgn0033528	trsn	91	53.241	ENSATEG00000004115	tsn	95	53.241	Anabas_testudineus
FBgn0033528	trsn	88	51.402	ENSACAG00000004757	TSN	97	51.402	Anolis_carolinensis
FBgn0033528	trsn	91	52.778	ENSANAG00000026842	TSN	95	52.778	Aotus_nancymaae
FBgn0033528	trsn	91	53.881	ENSACLG00000020831	tsn	95	53.881	Astatotilapia_calliptera
FBgn0033528	trsn	91	53.241	ENSAMXG00000035417	tsn	95	53.241	Astyanax_mexicanus
FBgn0033528	trsn	91	52.778	ENSBTAG00000006059	TSN	95	52.778	Bos_taurus
FBgn0033528	trsn	91	52.778	ENSCJAG00000044533	-	94	54.167	Callithrix_jacchus
FBgn0033528	trsn	91	52.778	ENSCJAG00000047222	-	95	52.778	Callithrix_jacchus
FBgn0033528	trsn	50	35.294	ENSCJAG00000008511	-	88	35.294	Callithrix_jacchus
FBgn0033528	trsn	91	52.778	ENSCAFG00000004700	TSN	88	53.271	Canis_familiaris
FBgn0033528	trsn	90	53.271	ENSCAFG00020011747	TSN	94	53.271	Canis_lupus_dingo
FBgn0033528	trsn	91	52.778	ENSCHIG00000010715	TSN	95	52.778	Capra_hircus
FBgn0033528	trsn	91	52.778	ENSTSYG00000004395	TSN	95	52.778	Carlito_syrichta
FBgn0033528	trsn	82	46.114	ENSCAPG00000015595	TSN	76	46.114	Cavia_aperea
FBgn0033528	trsn	91	52.778	ENSCPOG00000035645	TSN	95	52.778	Cavia_porcellus
FBgn0033528	trsn	91	52.315	ENSCCAG00000026371	TSN	95	52.315	Cebus_capucinus
FBgn0033528	trsn	62	38.514	ENSCCAG00000034886	-	82	38.514	Cebus_capucinus
FBgn0033528	trsn	91	52.778	ENSCATG00000032155	TSN	95	52.778	Cercocebus_atys
FBgn0033528	trsn	91	52.778	ENSCLAG00000006171	TSN	95	52.778	Chinchilla_lanigera
FBgn0033528	trsn	91	52.778	ENSCSAG00000016712	TSN	95	52.778	Chlorocebus_sabaeus
FBgn0033528	trsn	62	42.857	ENSCPBG00000013741	-	78	42.857	Chrysemys_picta_bellii
FBgn0033528	trsn	93	46.606	ENSCPBG00000018116	-	96	46.606	Chrysemys_picta_bellii
FBgn0033528	trsn	89	45.370	ENSCING00000012612	-	98	45.370	Ciona_intestinalis
FBgn0033528	trsn	91	42.986	ENSCSAVG00000009485	-	97	42.986	Ciona_savignyi
FBgn0033528	trsn	91	52.778	ENSCANG00000041881	TSN	95	52.778	Colobus_angolensis_palliatus
FBgn0033528	trsn	91	52.778	ENSCGRG00001018233	Tsn	95	52.778	Cricetulus_griseus_chok1gshd
FBgn0033528	trsn	91	52.778	ENSCGRG00000008331	Tsn	95	52.778	Cricetulus_griseus_crigri
FBgn0033528	trsn	90	52.995	ENSCSEG00000005825	tsn	94	52.995	Cynoglossus_semilaevis
FBgn0033528	trsn	90	50.000	ENSCVAG00000022024	tsn	95	49.541	Cyprinodon_variegatus
FBgn0033528	trsn	94	52.915	ENSDARG00000041830	tsn	98	52.915	Danio_rerio
FBgn0033528	trsn	91	52.778	ENSDNOG00000025740	TSN	95	52.778	Dasypus_novemcinctus
FBgn0033528	trsn	91	52.778	ENSDORG00000026251	-	95	52.778	Dipodomys_ordii
FBgn0033528	trsn	91	52.778	ENSEASG00005004774	TSN	95	52.778	Equus_asinus_asinus
FBgn0033528	trsn	91	52.778	ENSECAG00000015930	TSN	95	52.778	Equus_caballus
FBgn0033528	trsn	69	60.248	ENSEEUG00000013935	TSN	93	60.248	Erinaceus_europaeus
FBgn0033528	trsn	94	53.540	ENSELUG00000007669	tsn	98	53.540	Esox_lucius
FBgn0033528	trsn	90	53.271	ENSFCAG00000027149	TSN	94	53.271	Felis_catus
FBgn0033528	trsn	59	52.174	ENSFCAG00000022306	-	78	52.174	Felis_catus
FBgn0033528	trsn	83	55.556	ENSFALG00000013247	TSN	86	55.556	Ficedula_albicollis
FBgn0033528	trsn	91	52.778	ENSFDAG00000012302	TSN	95	52.778	Fukomys_damarensis
FBgn0033528	trsn	91	53.211	ENSFHEG00000015531	tsn	95	53.211	Fundulus_heteroclitus
FBgn0033528	trsn	92	52.511	ENSGMOG00000009247	tsn	96	52.511	Gadus_morhua
FBgn0033528	trsn	91	52.558	ENSGALG00000011652	TSN	94	52.558	Gallus_gallus
FBgn0033528	trsn	91	54.338	ENSGAFG00000003816	tsn	95	54.338	Gambusia_affinis
FBgn0033528	trsn	93	53.812	ENSGACG00000000235	tsn	96	53.812	Gasterosteus_aculeatus
FBgn0033528	trsn	91	52.778	ENSGGOG00000002216	TSN	94	54.315	Gorilla_gorilla
FBgn0033528	trsn	94	52.655	ENSHBUG00000002340	tsn	83	52.655	Haplochromis_burtoni
FBgn0033528	trsn	91	52.778	ENSHGLG00000007038	TSN	95	52.778	Heterocephalus_glaber_female
FBgn0033528	trsn	91	52.778	ENSHGLG00100000069	TSN	95	52.778	Heterocephalus_glaber_male
FBgn0033528	trsn	93	53.394	ENSHCOG00000001756	tsn	98	53.394	Hippocampus_comes
FBgn0033528	trsn	92	52.752	ENSIPUG00000021370	tsn	96	52.752	Ictalurus_punctatus
FBgn0033528	trsn	91	52.778	ENSSTOG00000000972	TSN	95	52.778	Ictidomys_tridecemlineatus
FBgn0033528	trsn	91	52.778	ENSJJAG00000006730	Tsn	95	52.778	Jaculus_jaculus
FBgn0033528	trsn	91	54.795	ENSKMAG00000004996	tsn	95	54.795	Kryptolebias_marmoratus
FBgn0033528	trsn	94	52.018	ENSLBEG00000012620	tsn	98	52.018	Labrus_bergylta
FBgn0033528	trsn	91	38.565	ENSLACG00000005246	TSN	96	38.565	Latimeria_chalumnae
FBgn0033528	trsn	92	55.046	ENSLOCG00000002191	tsn	95	55.046	Lepisosteus_oculatus
FBgn0033528	trsn	91	48.611	ENSLAFG00000032428	TSN	95	48.611	Loxodonta_africana
FBgn0033528	trsn	91	52.778	ENSMFAG00000044217	TSN	95	52.778	Macaca_fascicularis
FBgn0033528	trsn	91	52.778	ENSMMUG00000021119	TSN	95	52.778	Macaca_mulatta
FBgn0033528	trsn	91	52.778	ENSMNEG00000040632	TSN	95	52.778	Macaca_nemestrina
FBgn0033528	trsn	51	40.164	ENSMLEG00000038656	TSN	95	40.164	Mandrillus_leucophaeus
FBgn0033528	trsn	91	53.241	ENSMAMG00000019536	tsn	95	53.241	Mastacembelus_armatus
FBgn0033528	trsn	94	52.655	ENSMZEG00005018715	tsn	83	52.655	Maylandia_zebra
FBgn0033528	trsn	71	59.281	ENSMGAG00000011956	TSN	85	59.281	Meleagris_gallopavo
FBgn0033528	trsn	93	51.131	ENSMAUG00000018800	Tsn	95	54.872	Mesocricetus_auratus
FBgn0033528	trsn	91	52.778	ENSMICG00000015793	TSN	95	52.778	Microcebus_murinus
FBgn0033528	trsn	91	52.778	ENSMOCG00000013248	Tsn	95	52.778	Microtus_ochrogaster
FBgn0033528	trsn	83	54.726	ENSMMOG00000019661	tsn	97	54.726	Mola_mola
FBgn0033528	trsn	91	51.152	ENSMODG00000000147	TSN	95	51.152	Monodelphis_domestica
FBgn0033528	trsn	91	52.778	ENSMALG00000001827	tsn	95	52.778	Monopterus_albus
FBgn0033528	trsn	90	53.271	ENSMUSG00000026374	Tsn	94	53.271	Mus_musculus
FBgn0033528	trsn	90	53.271	MGP_PahariEiJ_G0027742	Tsn	94	53.271	Mus_pahari
FBgn0033528	trsn	90	53.271	MGP_SPRETEiJ_G0015313	Tsn	94	53.271	Mus_spretus
FBgn0033528	trsn	90	53.271	ENSMPUG00000001056	TSN	94	53.271	Mustela_putorius_furo
FBgn0033528	trsn	82	54.872	ENSMLUG00000012656	TSN	95	54.872	Myotis_lucifugus
FBgn0033528	trsn	91	52.778	ENSNGAG00000010353	Tsn	95	52.778	Nannospalax_galili
FBgn0033528	trsn	91	53.881	ENSNBRG00000001193	tsn	95	53.881	Neolamprologus_brichardi
FBgn0033528	trsn	91	52.778	ENSNLEG00000032773	TSN	95	52.778	Nomascus_leucogenys
FBgn0033528	trsn	62	44.218	ENSMEUG00000006228	TSN	64	44.218	Notamacropus_eugenii
FBgn0033528	trsn	56	52.273	ENSOPRG00000004858	-	94	52.273	Ochotona_princeps
FBgn0033528	trsn	91	52.778	ENSODEG00000008386	-	95	52.778	Octodon_degus
FBgn0033528	trsn	90	41.589	ENSODEG00000005998	-	93	41.589	Octodon_degus
FBgn0033528	trsn	91	53.881	ENSONIG00000017060	tsn	95	53.881	Oreochromis_niloticus
FBgn0033528	trsn	83	53.299	ENSOANG00000003457	TSN	95	53.299	Ornithorhynchus_anatinus
FBgn0033528	trsn	91	52.778	ENSOCUG00000023529	TSN	95	52.778	Oryctolagus_cuniculus
FBgn0033528	trsn	90	54.167	ENSORLG00000010049	tsn	94	54.167	Oryzias_latipes
FBgn0033528	trsn	94	53.333	ENSORLG00020016476	tsn	99	53.521	Oryzias_latipes_hni
FBgn0033528	trsn	59	42.254	ENSORLG00020017000	-	82	42.254	Oryzias_latipes_hni
FBgn0033528	trsn	90	54.167	ENSORLG00015019192	tsn	94	54.167	Oryzias_latipes_hsok
FBgn0033528	trsn	90	56.019	ENSOMEG00000016335	tsn	94	56.019	Oryzias_melastigma
FBgn0033528	trsn	91	52.778	ENSOGAG00000030436	TSN	95	52.778	Otolemur_garnettii
FBgn0033528	trsn	91	52.778	ENSOARG00000013339	TSN	95	52.778	Ovis_aries
FBgn0033528	trsn	91	52.778	ENSPPAG00000032878	TSN	95	52.778	Pan_paniscus
FBgn0033528	trsn	91	52.778	ENSPPRG00000006531	TSN	94	52.778	Panthera_pardus
FBgn0033528	trsn	59	54.348	ENSPPRG00000004174	-	62	54.348	Panthera_pardus
FBgn0033528	trsn	51	36.885	ENSPTIG00000012953	TSN	82	36.885	Panthera_tigris_altaica
FBgn0033528	trsn	91	52.778	ENSPTRG00000012420	TSN	95	52.778	Pan_troglodytes
FBgn0033528	trsn	91	52.778	ENSPANG00000000733	TSN	95	52.778	Papio_anubis
FBgn0033528	trsn	92	52.752	ENSPKIG00000002005	tsn	96	52.752	Paramormyrops_kingsleyae
FBgn0033528	trsn	70	60.606	ENSPSIG00000006064	TSN	90	60.606	Pelodiscus_sinensis
FBgn0033528	trsn	91	51.852	ENSPMGG00000015287	tsn	95	51.852	Periophthalmus_magnuspinnatus
FBgn0033528	trsn	94	47.964	ENSPMAG00000009161	tsn	96	47.964	Petromyzon_marinus
FBgn0033528	trsn	90	52.582	ENSPCIG00000023491	TSN	99	52.607	Phascolarctos_cinereus
FBgn0033528	trsn	91	54.795	ENSPFOG00000016063	tsn	95	54.795	Poecilia_formosa
FBgn0033528	trsn	91	54.795	ENSPLAG00000010654	tsn	95	54.795	Poecilia_latipinna
FBgn0033528	trsn	91	54.795	ENSPMEG00000023570	tsn	95	54.795	Poecilia_mexicana
FBgn0033528	trsn	91	54.795	ENSPREG00000003481	tsn	95	54.795	Poecilia_reticulata
FBgn0033528	trsn	91	52.778	ENSPPYG00000012774	TSN	95	52.778	Pongo_abelii
FBgn0033528	trsn	69	60.248	ENSPCAG00000003549	TSN	93	60.248	Procavia_capensis
FBgn0033528	trsn	91	52.778	ENSPCOG00000011045	TSN	95	52.778	Propithecus_coquereli
FBgn0033528	trsn	91	52.778	ENSPVAG00000016702	TSN	95	52.778	Pteropus_vampyrus
FBgn0033528	trsn	94	52.655	ENSPNYG00000012396	tsn	83	52.655	Pundamilia_nyererei
FBgn0033528	trsn	90	53.738	ENSPNAG00000018140	tsn	94	53.738	Pygocentrus_nattereri
FBgn0033528	trsn	91	52.778	ENSRNOG00000002319	Tsn	95	52.778	Rattus_norvegicus
FBgn0033528	trsn	91	52.778	ENSRBIG00000041316	TSN	95	52.778	Rhinopithecus_bieti
FBgn0033528	trsn	91	52.778	ENSRROG00000029954	TSN	95	52.778	Rhinopithecus_roxellana
FBgn0033528	trsn	91	52.778	ENSSBOG00000028579	TSN	95	52.778	Saimiri_boliviensis_boliviensis
FBgn0033528	trsn	72	37.500	ENSSBOG00000015719	-	96	37.500	Saimiri_boliviensis_boliviensis
FBgn0033528	trsn	97	50.870	ENSSHAG00000011707	TSN	98	50.870	Sarcophilus_harrisii
FBgn0033528	trsn	90	54.673	ENSSFOG00015020668	tsn	94	54.673	Scleropages_formosus
FBgn0033528	trsn	91	53.241	ENSSMAG00000005822	tsn	95	53.241	Scophthalmus_maximus
FBgn0033528	trsn	91	53.241	ENSSDUG00000011388	tsn	95	53.241	Seriola_dumerili
FBgn0033528	trsn	91	53.241	ENSSLDG00000008206	tsn	95	53.241	Seriola_lalandi_dorsalis
FBgn0033528	trsn	91	54.167	ENSSPUG00000017518	TSN	95	54.167	Sphenodon_punctatus
FBgn0033528	trsn	91	53.704	ENSSPAG00000009283	tsn	95	53.704	Stegastes_partitus
FBgn0033528	trsn	91	52.778	ENSSSCG00000015729	TSN	95	54.872	Sus_scrofa
FBgn0033528	trsn	91	53.241	ENSTGUG00000004445	TSN	94	53.241	Taeniopygia_guttata
FBgn0033528	trsn	91	54.167	ENSTRUG00000013691	tsn	97	55.276	Takifugu_rubripes
FBgn0033528	trsn	90	53.271	ENSTNIG00000015707	tsn	94	53.271	Tetraodon_nigroviridis
FBgn0033528	trsn	91	52.778	ENSTBEG00000015319	TSN	95	52.778	Tupaia_belangeri
FBgn0033528	trsn	91	52.778	ENSTTRG00000005854	TSN	95	52.778	Tursiops_truncatus
FBgn0033528	trsn	90	53.271	ENSUAMG00000021618	TSN	94	53.271	Ursus_americanus
FBgn0033528	trsn	90	52.804	ENSUMAG00000008516	TSN	94	52.804	Ursus_maritimus
FBgn0033528	trsn	93	49.776	ENSVVUG00000027555	TSN	94	54.872	Vulpes_vulpes
FBgn0033528	trsn	97	51.528	ENSXETG00000000838	tsn	97	51.528	Xenopus_tropicalis
FBgn0033528	trsn	50	42.276	ENSXCOG00000018514	tsn	92	42.276	Xiphophorus_couchianus
FBgn0033528	trsn	91	54.795	ENSXMAG00000022538	tsn	95	54.795	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003697	single-stranded DNA binding	21873635.	IBA	Function
GO:0003723	RNA binding	-	IEA	Function
GO:0004521	endoribonuclease activity	21873635.	IBA	Function
GO:0004521	endoribonuclease activity	19661431.	IDA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0005829	cytosol	17028328.17275950.	IDA	Component
GO:0016070	RNA metabolic process	-	IEA	Process
GO:0016246	RNA interference	19661431.	IMP	Process
GO:0042321	negative regulation of circadian sleep/wake cycle, sleep	27020744.	IMP	Process
GO:0042595	behavioral response to starvation	27020744.	IMP	Process
GO:0042803	protein homodimerization activity	17275950.	IPI	Function
GO:0043565	sequence-specific DNA binding	21873635.	IBA	Function
GO:0050821	protein stabilization	17028328.	IMP	Process