EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0033554 (Gene tree)
Gene ID: 36141
Gene Symbol: Lsm10
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Minus strand
Length: 543 bases
Position: chr2R:10821098-10821640
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0087343	LSM	PF01423.22	2.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0088248	-	543	-	FBpp0087343	141 (aa)	-	A1Z8C4

Gene Model

Click here to download FBgn0033554's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0033554's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0033554	Lsm10	77	31.193	ENSG00000181817	LSM10	85	31.193	Homo_sapiens
FBgn0033554	Lsm10	77	31.193	ENSANAG00000018759	-	85	31.193	Aotus_nancymaae
FBgn0033554	Lsm10	77	31.193	ENSANAG00000031489	-	86	31.193	Aotus_nancymaae
FBgn0033554	Lsm10	77	31.193	ENSCJAG00000044880	LSM10	85	31.193	Callithrix_jacchus
FBgn0033554	Lsm10	82	30.508	ENSCAFG00000003382	LSM10	94	30.508	Canis_familiaris
FBgn0033554	Lsm10	82	30.508	ENSCAFG00020008920	LSM10	94	30.508	Canis_lupus_dingo
FBgn0033554	Lsm10	77	30.275	ENSCCAG00000008378	-	85	30.275	Cebus_capucinus
FBgn0033554	Lsm10	77	31.193	ENSCCAG00000018913	-	85	31.193	Cebus_capucinus
FBgn0033554	Lsm10	77	31.193	ENSCATG00000006589	LSM10	85	31.193	Cercocebus_atys
FBgn0033554	Lsm10	77	31.193	ENSCSAG00000000134	LSM10	85	31.193	Chlorocebus_sabaeus
FBgn0033554	Lsm10	77	30.275	ENSCHOG00000008615	LSM10	84	30.275	Choloepus_hoffmanni
FBgn0033554	Lsm10	77	31.193	ENSCANG00000019928	LSM10	85	31.193	Colobus_angolensis_palliatus
FBgn0033554	Lsm10	70	31.313	ENSCGRG00001022673	-	80	31.313	Cricetulus_griseus_chok1gshd
FBgn0033554	Lsm10	70	31.313	ENSCGRG00000015514	-	80	31.313	Cricetulus_griseus_crigri
FBgn0033554	Lsm10	77	30.275	ENSDORG00000007579	Lsm10	85	30.275	Dipodomys_ordii
FBgn0033554	Lsm10	82	31.034	ENSEBUG00000001312	oscp1a	95	31.034	Eptatretus_burgeri
FBgn0033554	Lsm10	82	30.508	ENSECAG00000005071	LSM10	94	30.508	Equus_caballus
FBgn0033554	Lsm10	77	31.193	ENSGGOG00000003556	LSM10	85	31.193	Gorilla_gorilla
FBgn0033554	Lsm10	77	31.193	ENSMFAG00000009115	LSM10	85	31.193	Macaca_fascicularis
FBgn0033554	Lsm10	77	31.193	ENSMMUG00000017338	LSM10	85	31.193	Macaca_mulatta
FBgn0033554	Lsm10	77	31.193	ENSMNEG00000020023	LSM10	85	31.193	Macaca_nemestrina
FBgn0033554	Lsm10	77	31.193	ENSMLEG00000025150	LSM10	85	31.193	Mandrillus_leucophaeus
FBgn0033554	Lsm10	82	31.624	ENSMOCG00000021943	Lsm10	95	31.624	Microtus_ochrogaster
FBgn0033554	Lsm10	60	32.143	MGP_CAROLIEiJ_G0026467	Lsm10	90	32.143	Mus_caroli
FBgn0033554	Lsm10	82	30.769	ENSMUSG00000050188	Lsm10	95	30.769	Mus_musculus
FBgn0033554	Lsm10	82	30.769	MGP_PahariEiJ_G0028798	Lsm10	95	30.769	Mus_pahari
FBgn0033554	Lsm10	82	30.769	MGP_SPRETEiJ_G0027446	Lsm10	95	30.769	Mus_spretus
FBgn0033554	Lsm10	82	30.508	ENSMPUG00000018593	LSM10	94	30.508	Mustela_putorius_furo
FBgn0033554	Lsm10	82	30.000	ENSMLUG00000023895	LSM10	94	30.000	Myotis_lucifugus
FBgn0033554	Lsm10	77	31.193	ENSNLEG00000033754	LSM10	85	31.193	Nomascus_leucogenys
FBgn0033554	Lsm10	82	30.172	ENSOCUG00000005333	LSM10	94	30.172	Oryctolagus_cuniculus
FBgn0033554	Lsm10	77	31.193	ENSPPAG00000023465	LSM10	85	31.193	Pan_paniscus
FBgn0033554	Lsm10	77	31.193	ENSPTRG00000000539	LSM10	85	31.193	Pan_troglodytes
FBgn0033554	Lsm10	77	31.193	ENSPANG00000023172	LSM10	85	31.193	Papio_anubis
FBgn0033554	Lsm10	65	31.579	ENSPCIG00000014865	LSM10	70	31.579	Phascolarctos_cinereus
FBgn0033554	Lsm10	77	31.193	ENSPPYG00000001539	LSM10	85	31.193	Pongo_abelii
FBgn0033554	Lsm10	82	30.508	ENSPVAG00000008644	LSM10	94	30.508	Pteropus_vampyrus
FBgn0033554	Lsm10	77	31.193	ENSRBIG00000001561	LSM10	85	31.193	Rhinopithecus_bieti
FBgn0033554	Lsm10	77	31.193	ENSRROG00000011414	LSM10	85	31.193	Rhinopithecus_roxellana
FBgn0033554	Lsm10	77	31.193	ENSSBOG00000036413	-	85	31.193	Saimiri_boliviensis_boliviensis
FBgn0033554	Lsm10	57	33.333	ENSSARG00000004211	LSM10	84	30.275	Sorex_araneus
FBgn0033554	Lsm10	84	30.328	ENSTBEG00000016674	LSM10	96	30.328	Tupaia_belangeri
FBgn0033554	Lsm10	82	30.508	ENSVVUG00000023209	LSM10	94	30.508	Vulpes_vulpes
FBgn0033554	Lsm10	64	30.851	ENSXETG00000027631	lsm10	78	30.851	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0006397	mRNA processing	19620235.	IDA	Process
GO:0006398	mRNA 3'-end processing by stem-loop binding and cleavage	18042462.19620235.	IMP	Process
GO:0016604	nuclear body	17595295.	IDA	Component
GO:0035363	histone locus body	16533947.19620235.	IDA	Component
GO:0071254	cytoplasmic U snRNP body	17595295.	IDA	Component